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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3q41B_

Fold library idPDB HeaderMoleculeTitle
c3q41B_PDB header: transport proteinChain: B: PDB Molecule: glutamate [nmda] receptor subunit zeta-1;PDBTitle: crystal structure of the glun1 n-terminal domain (ntd)


Added to library: Sat Mar 26 09:41:51 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PKIVNIGAVLSTRKHEQMFREAVNQANKRHGSWKIQLNATSVTHKPNAIQMALSVCEDLISSQVYAILVS
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Known secondary structure (DSSP)
SS
SSS

SSTTGGG

 .........80.........90.........100.........110.........120.........130.........140
Sequence HPPTPNDHFTPTPVSYTAGFYRIPVLGLTTRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYNWNHI
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Known secondary structure (DSSP)

S
TTTTTTTTT


S


GGGGSSSS
TTSS

GGGB


 .........150.........160.........170.........180.........190.........200.........210
Sequence ILLVSDDHEGRAAQKRLETLLEERESKAEKVLQFDPGTKNVTALLMEARELEARVIILSASEDDAATVYR
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Known secondary structure (DSSP)
SSTTSS


TT
S

TSS




 .........220.........230.........240.........250.........260.........270.........280
Sequence AAAMLNMTGSGYVWLVGEREISGNALRYAPDGIIGLQLINGKNESAHISDAVGVVAQAVHELLEKENITD
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Known secondary structure (DSSP) TTT
SSTT


TTTTSTT

TT


BTTSS
TTS




 .........290.........300.........310.........320.........330.........340.........350
Sequence PPRGCVGNTNIWKTGPLFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYNGTHVI
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Known secondary structure (DSSP)




SS




TTT

S
TTSS
SSS
S
TT


SS
B
 .........360.......
Sequence PNDRKIIWPGGETEKPR
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Known secondary structure (DSSP)

SS



TTS

S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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