PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3lufB_

Fold library id	PDB Header	Molecule	Title
c3lufB_	PDB header: signaling protein	Chain: B: PDB Molecule: two-component system response regulator/ggdef	PDBTitle: structure of probable two-component system response2 regulator/ggdef domain protein

Links to external resources
Added to library: Sat Aug 28 20:56:00 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence K Q K I L I V E D S X T I R R X L I Q A I A Q Q T G L E I D A F D T L E G A R H C Q G D E Y V V A L V D L T L P D A P S G E A V K V L L E R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S T G G G T T
T T T S S B T T B T T S T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G L P V V I L T A D I S E D K R E A W L E A G V L D Y V X K D S R H S L Q Y A V G L V H R L Y L N Q Q I E V L V V D D S R T S R H R T X A Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
T T
S S T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L R K Q L L Q V H E A S H A R E A L A T L E Q H P A I R L V L V D Y Y X P E I D G I S L V R X L R E R Y S K Q Q L A I I G I S V S D K R G L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
S S
T T
S
S S S
T T T S
S T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . .

Sequence S A R Y L K Q G A N D F L N Q P F E P E E L Q C R V S H N L E A L E Q F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	Q	K	I	L	I	V	E	D	S	X	T	I	R	R	X	L	I	Q	A	I	A	Q	Q	T	G	L	E	I	D	A	F	D	T	L	E	G	A	R	H	C	Q	G	D	E	Y	V	V	A	L	V	D	L	T	L	P	D	A	P	S	G	E	A	V	K	V	L	L	E	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																									S								S	S	T	G	G	G	T	T			T	T	T								S	S	B	T	T	B	T	T	S									T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	L	P	V	V	I	L	T	A	D	I	S	E	D	K	R	E	A	W	L	E	A	G	V	L	D	Y	V	X	K	D	S	R	H	S	L	Q	Y	A	V	G	L	V	H	R	L	Y	L	N	Q	Q	I	E	V	L	V	V	D	D	S	R	T	S	R	H	R	T	X	A	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T								S													T	T								S	S																		T	T								S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	R	K	Q	L	L	Q	V	H	E	A	S	H	A	R	E	A	L	A	T	L	E	Q	H	P	A	I	R	L	V	L	V	D	Y	Y	X	P	E	I	D	G	I	S	L	V	R	X	L	R	E	R	Y	S	K	Q	Q	L	A	I	I	G	I	S	V	S	D	K	R	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T							S	S												T	T								S			S	S	S															T	T	T	S									S	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Sequence	S	A	R	Y	L	K	Q	G	A	N	D	F	L	N	Q	P	F	E	P	E	E	L	Q	C	R	V	S	H	N	L	E	A	L	E	Q	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T		S						S