Email l.a.kelley@imperial.ac.uk Description P76506 Date Thu Jan 5 12:23:43 GMT 2012 Unique Job ID cb51189c03d9ed96

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3kuzA_ 38.4 33 PDB header:signaling protein Chain: A: PDB Molecule:plexin-c1; PDBTitle: crystal structure of the ubiquitin like domain of plxnc1 2 c2jphA_ 38.0 53 PDB header:signaling protein, protein binding Chain: A: PDB Molecule:plexin-b1; PDBTitle: nmr solution structure of the rho gtpase binding domain of2 human plexin-b1 3 d1wjna_ 34.3 22 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 4 c3h6nA_ 34.2 33 PDB header:signaling protein Chain: A: PDB Molecule:plexin-d1; PDBTitle: crystal structure of the ubiquitin-like domain of plexin d1 5 c3q3jA_ 33.3 47 PDB header:membrane protein/protein binding Chain: A: PDB Molecule:plexin-a2; PDBTitle: crystal structure of plexin a2 rbd in complex with rnd1 6 d1z2ma1 21.7 35 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 7 d2odgc1 17.2 22 Fold:LEM/SAP HeH motif Superfamily:LEM domain Family:LEM domain 8 d1we7a_ 16.2 21 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 9 c2wx3A_ 14.2 29 PDB header:structural protein Chain: A: PDB Molecule:mrna-decapping enzyme 1a; PDBTitle: asymmetric trimer of the human dcp1a c-terminal domain 10 d1we6a_ 14.1 33 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 11 c1wziA_ 13.6 29 PDB header:oxidoreductase Chain: A: PDB Molecule:malate dehydrogenase; PDBTitle: structural basis for alteration of cofactor specificity of2 malate dehydrogenase from thermus flavus 12 c3su8X_ 13.3 53 PDB header:apoptosis/signaling protein Chain: X: PDB Molecule:plexin-b1; PDBTitle: crystal structure of a truncated intracellular domain of plexin-b1 in2 complex with rac1 13 d157la_ 12.9 17 Fold:Lysozyme-like Superfamily:Lysozyme-like Family:Phage lysozyme 14 c2agaA_ 12.8 24 PDB header:transcription Chain: A: PDB Molecule:machado-joseph disease protein 1; PDBTitle: de-ubiquitinating function of ataxin-3: insights from the2 solution structure of the josephin domain 15 d1ogwa_ 12.1 29 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 16 c3ig3A_ 10.1 44 PDB header:signaling protein, membrane protein Chain: A: PDB Molecule:plxna3 protein; PDBTitle: crystal strucure of mouse plexin a3 intracellular domain 17 d1zkha1 9.7 24 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 18 d1p37a_ 9.7 20 Fold:Lysozyme-like Superfamily:Lysozyme-like Family:Phage lysozyme 19 d1y7ta2 9.4 31 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:Lactate & malate dehydrogenases, C-terminal domain 20 d1i0za2 9.4 31 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:Lactate & malate dehydrogenases, C-terminal domain 21 c3m62B_ not modelled 9.2 25 PDB header:ligase/protein binding Chain: B: PDB Molecule:uv excision repair protein rad23; PDBTitle: crystal structure of ufd2 in complex with the ubiquitin-like (ubl)2 domain of rad23 22 d2f2qa1 not modelled 9.1 19 Fold:Lysozyme-like Superfamily:Lysozyme-like Family:Phage lysozyme 23 c3hm6X_ not modelled 9.0 50 PDB header:signaling protein Chain: X: PDB Molecule:plexin-b1; PDBTitle: crystal structure of the cytoplasmic domain of human plexin b1 24 d1v5oa_ not modelled 8.3 44 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 25 d1j8ca_ not modelled 8.3 35 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 26 d1b8pa2 not modelled 8.0 31 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:Lactate & malate dehydrogenases, C-terminal domain 27 c3jrnA_ not modelled 7.6 27 PDB header:plant protein Chain: A: PDB Molecule:at1g72930 protein; PDBTitle: crystal structure of tir domain from arabidopsis thaliana 28 d1oqya4 not modelled 7.3 13 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 29 d9ldta2 not modelled 7.0 25 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:Lactate & malate dehydrogenases, C-terminal domain 30 d2c5lc1 not modelled 6.8 13 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ras-binding domain, RBD 31 c2o4wA_ not modelled 6.7 20 PDB header:hydrolase Chain: A: PDB Molecule:lysozyme; PDBTitle: t4 lysozyme circular permutant 32 d1wxva1 not modelled 6.7 31 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 33 d1v5ta_ not modelled 6.7 12 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 34 d1icha_ not modelled 6.4 29 Fold:DEATH domain Superfamily:DEATH domain Family:DEATH domain, DD 35 c1ichA_ not modelled 6.4 29 PDB header:apoptosis Chain: A: PDB Molecule:tumor necrosis factor receptor-1; PDBTitle: solution structure of the tumor necrosis factor receptor-12 death domain 36 c3pbpL_ not modelled 6.1 25 PDB header:transport protein,structural protein Chain: L: PDB Molecule:nucleoporin nup159; PDBTitle: structure of the yeast heterotrimeric nup82-nup159-nup116 nucleoporin2 complex 37 d1z2ma2 not modelled 6.1 29 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 38 d1sifa_ not modelled 6.1 29 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 39 d2ihoa2 not modelled 6.0 50 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:MOA C-terminal domain-like 40 d1uela_ not modelled 6.0 16 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 41 c2kj6A_ not modelled 5.9 19 PDB header:chaperone Chain: A: PDB Molecule:tubulin folding cofactor b; PDBTitle: nmr solution structure of a tubulin folding cofactor b2 obtained from arabidopsis thaliana: northeast structural3 genomics consortium target ar3436a 42 c2k25A_ not modelled 5.9 29 PDB header:unknown function Chain: A: PDB Molecule:ubb; PDBTitle: automated nmr structure of the ubb by fapsy 43 d1l64a_ not modelled 5.7 16 Fold:Lysozyme-like Superfamily:Lysozyme-like Family:Phage lysozyme 44 c2l7rA_ not modelled 5.7 29 PDB header:protein binding Chain: A: PDB Molecule:ubiquitin-like protein fubi; PDBTitle: solution nmr structure of n-terminal ubiquitin-like domain of fubi, a2 ribosomal protein s30 precursor from homo sapiens. northeast3 structural genomics consortium (nesg) target hr6166 45 d1ldma2 not modelled 5.7 25 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:Lactate & malate dehydrogenases, C-terminal domain 46 d2bh1a1 not modelled 5.6 25 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Cyto-EpsL domain 47 c2kanA_ not modelled 5.6 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein ar3433a; PDBTitle: solution nmr structure of ubiquitin-like domain of2 arabidopsis thaliana protein at2g32350. northeast3 structural genomics consortium target ar3433a 48 d1wx8a1 not modelled 5.6 24 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 49 d2ldxa2 not modelled 5.4 19 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:Lactate & malate dehydrogenases, C-terminal domain 50 d1jtma_ not modelled 5.4 18 Fold:Lysozyme-like Superfamily:Lysozyme-like Family:Phage lysozyme 51 c1yx5B_ not modelled 5.3 29 PDB header:hydrolase Chain: B: PDB Molecule:ubiquitin; PDBTitle: solution structure of s5a uim-1/ubiquitin complex 52 d1qbaa2 not modelled 5.3 12 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f Superfamily:Carbohydrate-binding domain Family:Bacterial chitobiase, n-terminal domain 53 d2g7ja1 not modelled 5.1 30 Fold:Secretion chaperone-like Superfamily:YgaC/TfoX-N like Family:YgaC-like 54 d1bt0a_ not modelled 5.1 24 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related