Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3ig3A_

Fold library idPDB HeaderMoleculeTitle
c3ig3A_PDB header: signaling protein, membrane proteinChain: A: PDB Molecule: plxna3 protein;PDBTitle: crystal strucure of mouse plexin a3 intracellular domain


Added to library: Sat Aug 28 17:48:22 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence STQDADRTLKRLQLQMDNLESRVALECKEAFAELQTDINELTNHVQIPFLDYRTYAVRVLFPGIEAHPVL
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP)

S





B

STT
TT
GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence KELDTPPNVEKALRLFGQLLHSRAFLLTFIHTLEAQSSFSMRDRGTVASLTMVALQSRLDYATGLLKQLL
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP) S




TT
T
TT

TGGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence ADLIEKNLESKNHPKLLLRRTESVAEKMLTNWFTFLLHKFLKECAGEPLFLLYCAIKQQMEKGPIDAITG
Predicted secondary structure







SS confidence





































































Known secondary structure (DSSP) TT

STTTTTS


TTTTTS
B
TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence EARYSLSEDKLIRQQIDYKTLTLHCVCPESEAQVPVKVLNCDSITQAKDKLLDTVYKGIPYSQRPKAEDM
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP)
BTT
SSGGGB

S





TTT

TT
BTTTS
GGGS

GGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence DLEWRQGRMARIILQDEDITTKIECDWKRVNSLAHYQVTDGSLVALVPKGTKLWHLVRNHVSEIYLTRLL
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP) S
SS

SSSTT

TT

BTTTTT

TT



SS





 .........360.........370.........380.........390.........400.........410.........420
Sequence ATKGTLQKFVDDLFETVFSTAHRGSALPLAIKYMFDFLDEQADQRQISDPDVRHTWKSNCLPLRFWVNVI
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP) T
SSGGG



TTT


TTTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence KNPQFVFDIHKNSITDACLSVVAQTFMDSCSTSEHRLGKDSPSNKLLYAKDIPNYKSWVERYYRDIAKMA
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP)
GGGTBS



T

S




TTS
TTTTS
 .........500.........510.........520.........530.........540.........550.........560
Sequence SISDQDMDAYLVEQSRLHANDFNVLSALSELYFYVTKYRQEILTSLDRDASCRKHKLRQKLEQIITLVSS
Predicted secondary structure







SS confidence





































































Known secondary structure (DSSP)


TTTSS
TSTT
 .
Sequence S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D