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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3hm6X_

Fold library idPDB HeaderMoleculeTitle
c3hm6X_PDB header: signaling proteinChain: X: PDB Molecule: plexin-b1;PDBTitle: crystal structure of the cytoplasmic domain of human plexin b1


Added to library: Sat Aug 28 19:11:34 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IPFLDYKVYAERIFFPGHSPLHRDLGVPESRRPTVEQGLGQLSNLLNSKLFLTKFIHTLETQRTFSARDR
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Known secondary structure (DSSP)

B

STT

TTSS




GGGT

TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence AYVASLLTVALHGKLEYFTDILRTLLSDLVAQYVAKNPKLMLRRTETVVEKLLTNWMSICLYTFVRDSVG
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Known secondary structure (DSSP) TTT
TS
GGGTT
SS
STT
 .........150.........160.........170.........180.........190.........200.........210
Sequence EPLYMLFRGIKHQVDKGPVDSVTGKAKYTLNDNRLLREDVEYRPLTLNALLAAQGVPVKVLDCDTISQAK
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Known secondary structure (DSSP) TS
B
TTT

BSS
S
SSSB

S









TTSB
 .........220.........230.........240.........250.........260.........270.........280
Sequence EKMLDQLYKGVPLTQRPDPRTLDVEWRSGVAGHLILSDEDVTSEVQGLWRRLNTLQHYKVPDGATVALVP
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Known secondary structure (DSSP) TTTS
GGGS

GGG
SSS

SSSTT

TT

BTTTTT

TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence CGGIRPWHLVKPSIPEIYLTRLLSMKGTLQKFVDDLFQVILSTSRPVPLAVKYFFDLLDEQAQQHGISDQ
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Known secondary structure (DSSP)



SSS





SSS


TT


 .........360.........370.........380.........390.........400.........410.........420
Sequence DTIHIWKTNSLPLRFWINIIKNPQFVFDVQTSDNMDAVLLVIAQTFMDACTLADSPINKLLYARDIPRYK
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Known secondary structure (DSSP) TTTTT
GGGTBS









TTTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence RMVERYYADIRQTVPASDQEMNSVLAELSWNYSGDLGARVALHELYKYINKYYDQIITALEEDGTAQKMQ
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Known secondary structure (DSSP) S



SS
S


TTSTT
 .........500...
Sequence LGYRLQQIAAAVE
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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