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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2agaA_

Fold library idPDB HeaderMoleculeTitle
c2agaA_PDB header: transcriptionChain: A: PDB Molecule: machado-joseph disease protein 1;PDBTitle: de-ubiquitinating function of ataxin-3: insights from the2 solution structure of the josephin domain


Added to library: Tue Mar 16 12:55:35 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GPLGSMESIFHEKQEGSLCAQHCLNNLLQGEYFSPVELSSIAHQLDEEERMRMAEGGVTSEDYRTFLQQP
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Known secondary structure (DSSP)

S
GGGG
S
SS



SSTTTS




TTTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence SGNMDDSGFFSIQVISNALKVWGLELILFNSPEYQRLRIDPINERSFICNYKEHWFTVRKLGKQWFNLNS
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Known secondary structure (DSSP)
S


SSS


TT
S



STTSS
SS
TTSS
 .........150.........160.........170.........180.........190
Sequence LLTGPELISDTYLALFLAQLQQEGYSIFVVKGDLPDCEADQLLQMIRVQQ
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Known secondary structure (DSSP) TTSS




S




T

STT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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