Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1wziA_

Fold library idPDB HeaderMoleculeTitle
c1wziA_PDB header: oxidoreductaseChain: A: PDB Molecule: malate dehydrogenase;PDBTitle: structural basis for alteration of cofactor specificity of2 malate dehydrogenase from thermus flavus


Added to library: Tue Mar 16 12:39:16 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLGSERSFQALEGVVMELEDCAFPLLAGLEA
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP)



SSTTSTTTTT
TT



TTTTTT
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence TDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIA
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP) S
TTT
S






SS

S
TT

SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence YKNAPGLNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSSTMFPDLFHAEVDGRPALELVD
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP) T
TTS
GGG

TS
GGG

B
SSTT

SS
TTGGGTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence MEWYEKVFIPTVAQRGAAIIQARGASSAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIVY
Predicted secondary structure


















SS confidence





































































Known secondary structure (DSSP) TSS

TB

TT


SSGGG

TTS
 .........290.........300.........310.........320.......
Sequence SFPVTAKDGAYRVVEGLEINEFARKRMEITAQELLDEMEQVKALGLI
Predicted secondary structure












SS confidence














































Known secondary structure (DSSP) TT






TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D