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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3su8X_

Fold library idPDB HeaderMoleculeTitle
c3su8X_PDB header: apoptosis/signaling proteinChain: X: PDB Molecule: plexin-b1;PDBTitle: crystal structure of a truncated intracellular domain of plexin-b1 in2 complex with rac1


Added to library: Sat Oct 1 10:13:17 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GSGIPFLDYKVYAERIFFPGHRESPLHRDLGVPESRRPTVEQGLGQLSNLLNSKLFLTKFIHTLETQRTF
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Known secondary structure (DSSP)




B

STTSSS
TTSS




TTTT
T
SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence SARDRAYVASLLTVALHGKLEYFTDILRTLLSDLVAQYVAKNPKLMLRRTETVVEKLLTNWMSICLYTFV
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Known secondary structure (DSSP)
TTT
S
GGGTTSSS
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence RDSVGEPLYMLFRGIKHQVDKGPVDSVTGKAKYTLNDNRLLREDVEYRPLTLNALLAVAQGVPVKVLDCD
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Known secondary structure (DSSP) TTTTS
B
TTT

BSS
S
GGGB

S









TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence TISQAKEKMLDQLYKGVPLTQRPDPRTLDVEWRSGVAGHLILSDEDVTSEVQGLWRRLNTLQHYKVPDGA
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Known secondary structure (DSSP) BTTT

TTTS

GGG
TT



SSSTT
TT

BT

TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence TVALVPCLTGIRPWHLVKPSDEPEPPRPRRGSLRGGERERAKAIPEIYLTRLLSMKGTLQKFVDDLFQVI
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Known secondary structure (DSSP)




SSS











SS



SSTTSS



T
 .........360.........370.........380.........390.........400.........410.........420
Sequence LSTSRPVPLAVKYFFDLLDEQAQQHGISDQDTIHIWKTNSLPLRFWINIIKNPQFVFDVQTSDNMDAVLL
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Known secondary structure (DSSP) T
SSS


TT


TTTTTTT
GGGTB




 .........430.........440.........450.........460.........470.........480.........490
Sequence VIAQTFMDACTLADHKLGRDSPINKLLYARDIPRYKRMVERYYADIRQTVPASDQEMNSVLAELSWNYSG
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Known secondary structure (DSSP)







TTS
STTTS






 .........500.........510.........520.........530.........
Sequence DLGARVALHELYKYINKYYDQIITALEEDGTAQKMQLGYRLQQIAAAVE
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Known secondary structure (DSSP)
S
SST


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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