1 c3a5iB_
100.0
96
PDB header: protein transportChain: B: PDB Molecule: flagellar biosynthesis protein flha;PDBTitle: structure of the cytoplasmic domain of flha
2 c3mydA_
100.0
38
PDB header: protein transportChain: A: PDB Molecule: flagellar biosynthesis protein flha;PDBTitle: structure of the cytoplasmic domain of flha from helicobacter pylori
3 c2x49A_
100.0
22
PDB header: protein transportChain: A: PDB Molecule: invasion protein inva;PDBTitle: crystal structure of the c-terminal domain of inva
4 c3mixA_
100.0
36
PDB header: protein transportChain: A: PDB Molecule: flagellar biosynthesis protein flha;PDBTitle: crystal structure of the cytosolic domain of b. subtilis flha
5 c3lw9B_
100.0
18
PDB header: protein transportChain: B: PDB Molecule: invasion protein inva;PDBTitle: structure of a cytoplasmic domain of salmonella inva
6 c1ny5A_
48.4
14
PDB header: transcriptionChain: A: PDB Molecule: transcriptional regulator (ntrc family);PDBTitle: crystal structure of sigm54 activator (aaa+ atpase) in the inactive2 state
7 d1lm5a_
47.8
18
Fold: beta-hairpin-alpha-hairpin repeatSuperfamily: Plakin repeatFamily: Plakin repeat8 c3gz6A_
41.5
18
PDB header: dna binding protein/dnaChain: A: PDB Molecule: mutt/nudix family protein;PDBTitle: crystal structure of shewanella oneidensis nrtr complexed2 with a 27mer dna
9 c2jobA_
39.9
38
PDB header: lipid binding proteinChain: A: PDB Molecule: antilipopolysaccharide factor;PDBTitle: solution structure of an antilipopolysaccharide factor from2 shrimp and its possible lipid a binding site
10 d1ovma1
37.8
12
Fold: DHS-like NAD/FAD-binding domainSuperfamily: DHS-like NAD/FAD-binding domainFamily: Pyruvate oxidase and decarboxylase, middle domain11 d1wi9a_
37.2
24
Fold: DNA/RNA-binding 3-helical bundleSuperfamily: "Winged helix" DNA-binding domainFamily: PCI domain (PINT motif)12 c3mtuD_
32.8
23
PDB header: contractile proteinChain: D: PDB Molecule: tropomyosin alpha-1 chain, microtubule-associated proteinPDBTitle: structure of the tropomyosin overlap complex from chicken smooth2 muscle
13 c3t6kB_
29.0
22
PDB header: signaling proteinChain: B: PDB Molecule: response regulator receiver;PDBTitle: crystal structure of a hypothetical response regulator (caur_3799)2 from chloroflexus aurantiacus j-10-fl at 1.86 a resolution
14 d1zh2a1
29.0
18
Fold: Flavodoxin-likeSuperfamily: CheY-likeFamily: CheY-related15 d1jhna4
27.2
16
Fold: Concanavalin A-like lectins/glucanasesSuperfamily: Concanavalin A-like lectins/glucanasesFamily: Calnexin/calreticulin16 d2h9fa2
23.2
24
Fold: Diaminopimelate epimerase-likeSuperfamily: Diaminopimelate epimerase-likeFamily: PA0793-like17 c1b35D_
23.0
22
PDB header: virusChain: D: PDB Molecule: protein (cricket paralysis virus, vp4);PDBTitle: cricket paralysis virus (crpv)
18 c3cfyA_
22.3
18
PDB header: structural genomics, unknown functionChain: A: PDB Molecule: putative luxo repressor protein;PDBTitle: crystal structure of signal receiver domain of putative luxo2 repressor protein from vibrio parahaemolyticus
19 d2fswa1
21.4
17
Fold: DNA/RNA-binding 3-helical bundleSuperfamily: "Winged helix" DNA-binding domainFamily: HxlR-like20 c1iijA_
21.0
38
PDB header: signaling proteinChain: A: PDB Molecule: erbb-2 receptor protein-tyrosine kinase;PDBTitle: solution structure of the neu/erbb-2 membrane spanning2 segment
21 c3kmgE_
not modelled
20.8
50
PDB header: transcriptionChain: E: PDB Molecule: steroid receptor coactivator-1;PDBTitle: the x-ray crystal structure of ppar-gamma in complex with an indole2 derivative modulator, gsk538, and an src-1 peptide
22 c2q2kA_
not modelled
20.1
34
PDB header: dna binding protein/dnaChain: A: PDB Molecule: hypothetical protein;PDBTitle: structure of nucleic-acid binding protein
23 c2rjnA_
not modelled
19.3
12
PDB header: hydrolaseChain: A: PDB Molecule: response regulator receiver:metal-dependentPDBTitle: crystal structure of an uncharacterized protein q2bku2 from2 neptuniibacter caesariensis
24 c2zwmA_
not modelled
19.0
19
PDB header: transcriptionChain: A: PDB Molecule: transcriptional regulatory protein yycf;PDBTitle: crystal structure of yycf receiver domain from bacillus2 subtilis
25 c2dd4H_
not modelled
18.4
26
PDB header: hydrolaseChain: H: PDB Molecule: thiocyanate hydrolase beta subunit;PDBTitle: thiocyanate hydrolase (scnase) from thiobacillus thioparus2 recombinant apo-enzyme
26 c2cdqB_
not modelled
17.6
13
PDB header: transferaseChain: B: PDB Molecule: aspartokinase;PDBTitle: crystal structure of arabidopsis thaliana aspartate kinase2 complexed with lysine and s-adenosylmethionine
27 c4a5mH_
not modelled
17.4
20
PDB header: transcriptionChain: H: PDB Molecule: uncharacterized hth-type transcriptional regulator yybr;PDBTitle: redox regulator hypr in its oxidized form
28 d1qhma_
not modelled
17.1
50
Fold: PFL-like glycyl radical enzymesSuperfamily: PFL-like glycyl radical enzymesFamily: PFL-like29 c2o2fA_
not modelled
17.1
16
PDB header: apoptosisChain: A: PDB Molecule: apoptosis regulator bcl-2;PDBTitle: solution structure of the anti-apoptotic protein bcl-2 in2 complex with an acyl-sulfonamide-based ligand
30 c2yhsA_
not modelled
16.6
15
PDB header: cell cycleChain: A: PDB Molecule: cell division protein ftsy;PDBTitle: structure of the e. coli srp receptor ftsy
31 d1zgza1
not modelled
16.3
15
Fold: Flavodoxin-likeSuperfamily: CheY-likeFamily: CheY-related32 c3dnfB_
not modelled
16.0
17
PDB header: oxidoreductaseChain: B: PDB Molecule: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase;PDBTitle: structure of (e)-4-hydroxy-3-methyl-but-2-enyl diphosphate reductase,2 the terminal enzyme of the non-mevalonate pathway
33 c2lkyA_
not modelled
15.2
16
PDB header: structural genomics, unknown functionChain: A: PDB Molecule: uncharacterized protein;PDBTitle: solution structure of msmeg_1053, the second duf3349 annotated protein2 in the genome of mycobacterium smegmatis, seattle structural genomics3 center for infectious disease target mysma.17112.b
34 c3rg0A_
not modelled
15.1
24
PDB header: chaperoneChain: A: PDB Molecule: calreticulin;PDBTitle: structural and functional relationships between the lectin and arm2 domains of calreticulin
35 c1vj7B_
not modelled
14.9
17
PDB header: hydrolase, transferaseChain: B: PDB Molecule: bifunctional rela/spot;PDBTitle: crystal structure of the bifunctional catalytic fragment of relseq,2 the rela/spot homolog from streptococcus equisimilis.
36 c2lbgA_
not modelled
14.9
56
PDB header: membrane proteinChain: A: PDB Molecule: major prion protein;PDBTitle: structure of the chr of the prion protein in dpc micelles
37 c2oviA_
not modelled
14.5
21
PDB header: ligand binding protein, metal transportChain: A: PDB Molecule: hypothetical protein chux;PDBTitle: structure of the heme binding protein chux
38 c2hfpB_
not modelled
14.5
54
PDB header: transcriptionChain: B: PDB Molecule: src peptide fragment;PDBTitle: crystal structure of ppar gamma with n-sulfonyl-2-indole2 carboxamide ligands
39 c1fm9E_
not modelled
14.3
54
PDB header: transcriptionChain: E: PDB Molecule: steroid receptor coactivator;PDBTitle: the 2.1 angstrom resolution crystal structure of the2 heterodimer of the human rxralpha and ppargamma ligand3 binding domains respectively bound with 9-cis retinoic4 acid and gi262570 and co-activator peptides.
40 c1fm6E_
not modelled
14.3
54
PDB header: transcriptionChain: E: PDB Molecule: steroid receptor coactivator;PDBTitle: the 2.1 angstrom resolution crystal structure of the2 heterodimer of the human rxralpha and ppargamma ligand3 binding domains respectively bound with 9-cis retinoic4 acid and rosiglitazone and co-activator peptides.
41 c1k74E_
not modelled
14.3
54
PDB header: transcriptionChain: E: PDB Molecule: steroid receptor coactivator;PDBTitle: the 2.3 angstrom resolution crystal structure of the2 heterodimer of the human ppargamma and rxralpha ligand3 binding domains respectively bound with gw409544 and 9-cis4 retinoic acid and co-activator peptides.
42 d1h16a_
not modelled
14.2
50
Fold: PFL-like glycyl radical enzymesSuperfamily: PFL-like glycyl radical enzymesFamily: PFL-like43 c3ke8A_
not modelled
14.1
17
PDB header: oxidoreductaseChain: A: PDB Molecule: 4-hydroxy-3-methylbut-2-enyl diphosphatePDBTitle: crystal structure of isph:hmbpp-complex
44 c1fm6V_
not modelled
14.0
54
PDB header: transcriptionChain: V: PDB Molecule: steroid receptor coactivator;PDBTitle: the 2.1 angstrom resolution crystal structure of the2 heterodimer of the human rxralpha and ppargamma ligand3 binding domains respectively bound with 9-cis retinoic4 acid and rosiglitazone and co-activator peptides.
45 c3hjlA_
not modelled
13.7
14
PDB header: proton transportChain: A: PDB Molecule: flagellar motor switch protein flig;PDBTitle: the structure of full-length flig from aquifex aeolicus
46 d2fb1a1
not modelled
13.4
24
Fold: DNA/RNA-binding 3-helical bundleSuperfamily: "Winged helix" DNA-binding domainFamily: Nudix-associated domain47 c1jscA_
not modelled
13.2
16
PDB header: lyaseChain: A: PDB Molecule: acetohydroxy-acid synthase;PDBTitle: crystal structure of the catalytic subunit of yeast2 acetohydroxyacid synthase: a target for herbicidal3 inhibitors
48 d1pvda1
not modelled
13.2
12
Fold: DHS-like NAD/FAD-binding domainSuperfamily: DHS-like NAD/FAD-binding domainFamily: Pyruvate oxidase and decarboxylase, middle domain49 c1p8dC_
not modelled
13.1
50
PDB header: membrane protein/protein bindingChain: C: PDB Molecule: nuclear receptor coactivator 1 isoform 3;PDBTitle: x-ray crystal structure of lxr ligand binding domain with 24(s),25-2 epoxycholesterol
50 d2f2ea1
not modelled
13.0
16
Fold: DNA/RNA-binding 3-helical bundleSuperfamily: "Winged helix" DNA-binding domainFamily: HxlR-like51 c2cu5C_
not modelled
12.9
21
PDB header: structural genomics, unknown functionChain: C: PDB Molecule: conserved hypothetical protein tt1486;PDBTitle: crystal structure of the conserved hypothetical protein tt1486 from2 thermus thermophilus hb8
52 d1zpda1
not modelled
12.4
15
Fold: DHS-like NAD/FAD-binding domainSuperfamily: DHS-like NAD/FAD-binding domainFamily: Pyruvate oxidase and decarboxylase, middle domain53 c2qzjC_
not modelled
12.3
8
PDB header: transcriptionChain: C: PDB Molecule: two-component response regulator;PDBTitle: crystal structure of a two-component response regulator from2 clostridium difficile
54 c2peoA_
not modelled
12.3
16
PDB header: chaperoneChain: A: PDB Molecule: rbcx protein;PDBTitle: crystal structure of rbcx from anabaena ca
55 d2peoa1
not modelled
12.3
16
Fold: RbcX-likeSuperfamily: RbcX-likeFamily: RbcX-like56 d1rh5a_
not modelled
12.1
20
Fold: Preprotein translocase SecY subunitSuperfamily: Preprotein translocase SecY subunitFamily: Preprotein translocase SecY subunit57 c3s93B_
not modelled
12.0
16
PDB header: transcriptionChain: B: PDB Molecule: tudor domain-containing protein 5;PDBTitle: crystal structure of conserved motif in tdrd5
58 d1a68a_
not modelled
11.8
25
Fold: POZ domainSuperfamily: POZ domainFamily: Tetramerization domain of potassium channels59 c1mhsA_
not modelled
11.3
24
PDB header: membrane protein, proton transportChain: A: PDB Molecule: plasma membrane atpase;PDBTitle: model of neurospora crassa proton atpase
60 c1nw3A_
not modelled
11.2
23
PDB header: transferaseChain: A: PDB Molecule: histone methyltransferase dot1l;PDBTitle: structure of the catalytic domain of human dot1l, a non-set2 domain nucleosomal histone methyltransferase
61 d1nw3a_
not modelled
11.2
23
Fold: S-adenosyl-L-methionine-dependent methyltransferasesSuperfamily: S-adenosyl-L-methionine-dependent methyltransferasesFamily: Catalytic, N-terminal domain of histone methyltransferase Dot1l62 c2kvcA_
not modelled
11.2
12
PDB header: unknown functionChain: A: PDB Molecule: putative uncharacterized protein;PDBTitle: solution structure of the mycobacterium tuberculosis protein rv0543c,2 a member of the duf3349 superfamily. seattle structural genomics3 center for infectious disease target mytud.17112.a
63 d1ugpa_
not modelled
11.2
29
Fold: Nitrile hydratase alpha chainSuperfamily: Nitrile hydratase alpha chainFamily: Nitrile hydratase alpha chain64 c2prgC_
not modelled
11.1
54
PDB header: complex (thiazolidinedione/receptor)Chain: C: PDB Molecule: nuclear receptor coactivator src-1;PDBTitle: ligand-binding domain of the human peroxisome proliferator2 activated receptor gamma
65 d1xhfa1
not modelled
10.7
15
Fold: Flavodoxin-likeSuperfamily: CheY-likeFamily: CheY-related66 c3ktsA_
not modelled
10.6
20
PDB header: transcriptional regulatorChain: A: PDB Molecule: glycerol uptake operon antiterminator regulatory protein;PDBTitle: crystal structure of glycerol uptake operon antiterminator regulatory2 protein from listeria monocytogenes str. 4b f2365
67 c2c9eA_
not modelled
10.6
18
PDB header: photosynthesisChain: A: PDB Molecule: peridinin-chlorophyll a protein;PDBTitle: peridinin-chlorophyll a protein, high-salt form
68 d1niga_
not modelled
10.5
23
Fold: Ferritin-likeSuperfamily: Cobalamin adenosyltransferase-likeFamily: Hypothetical protein Ta123869 c2z99A_
not modelled
10.3
19
PDB header: cell cycleChain: A: PDB Molecule: putative uncharacterized protein;PDBTitle: crystal structure of scpb from mycobacterium tuberculosis
70 d1y8oa1
not modelled
10.2
17
Fold: Bromodomain-likeSuperfamily: alpha-ketoacid dehydrogenase kinase, N-terminal domainFamily: alpha-ketoacid dehydrogenase kinase, N-terminal domain71 c3cgxA_
not modelled
10.2
13
PDB header: transferaseChain: A: PDB Molecule: putative nucleotide-diphospho-sugar transferase;PDBTitle: crystal structure of putative nucleotide-diphospho-sugar transferase2 (yp_389115.1) from desulfovibrio desulfuricans g20 at 1.90 a3 resolution
72 c2qr3A_
not modelled
10.2
15
PDB header: transcriptionChain: A: PDB Molecule: two-component system response regulator;PDBTitle: crystal structure of the n-terminal signal receiver domain of two-2 component system response regulator from bacteroides fragilis
73 c1pjtB_
not modelled
10.0
11
PDB header: transferase/oxidoreductase/lyaseChain: B: PDB Molecule: siroheme synthase;PDBTitle: the structure of the ser128ala point-mutant variant of cysg,2 the multifunctional3 methyltransferase/dehydrogenase/ferrochelatase for4 siroheme synthesis
74 d1d8ba_
not modelled
9.9
23
Fold: SAM domain-likeSuperfamily: HRDC-likeFamily: HRDC domain from helicases75 c3df8A_
not modelled
9.9
24
PDB header: transcriptionChain: A: PDB Molecule: possible hxlr family transcriptional factor;PDBTitle: the crystal structure of a possible hxlr family transcriptional factor2 from thermoplasma volcanium gss1
76 c6paxA_
not modelled
9.8
29
PDB header: gene regulation/dnaChain: A: PDB Molecule: homeobox protein pax-6;PDBTitle: crystal structure of the human pax-6 paired domain-dna2 complex reveals a general model for pax protein-dna3 interactions
77 c2q9qF_
not modelled
9.8
16
PDB header: replicationChain: F: PDB Molecule: gins complex subunit 4;PDBTitle: the crystal structure of full length human gins complex
78 d1qkka_
not modelled
9.7
8
Fold: Flavodoxin-likeSuperfamily: CheY-likeFamily: CheY-related79 d1dsxa_
not modelled
9.7
27
Fold: POZ domainSuperfamily: POZ domainFamily: Tetramerization domain of potassium channels80 d1orna_
not modelled
9.7
17
Fold: DNA-glycosylaseSuperfamily: DNA-glycosylaseFamily: Endonuclease III81 d1b0na1
not modelled
9.4
38
Fold: Dimerisation interlockSuperfamily: SinR repressor dimerisation domain-likeFamily: SinR repressor dimerisation domain-like82 d1wfra_
not modelled
9.3
27
Fold: SCP-likeSuperfamily: SCP-likeFamily: Sterol carrier protein, SCP83 c2ph0A_
not modelled
9.2
17
PDB header: structural genomics, unknown functionChain: A: PDB Molecule: uncharacterized protein;PDBTitle: crystal structure of the q6d2t7_erwct protein from erwinia2 carotovora. nesg target ewr41.
84 c1cpbA_
not modelled
9.1
24
PDB header: hydrolase (c-terminal peptidase)Chain: A: PDB Molecule: carboxypeptidase b;PDBTitle: structure of carboxypeptidase b at 2.8 angstroms resolution
85 d1iuka_
not modelled
9.0
19
Fold: NAD(P)-binding Rossmann-fold domainsSuperfamily: NAD(P)-binding Rossmann-fold domainsFamily: CoA-binding domain86 c2f3oB_
not modelled
8.9
25
PDB header: unknown functionChain: B: PDB Molecule: pyruvate formate-lyase 2;PDBTitle: crystal structure of a glycyl radical enzyme from archaeoglobus2 fulgidus
87 d1ni5a1
not modelled
8.9
15
Fold: Adenine nucleotide alpha hydrolase-likeSuperfamily: Adenine nucleotide alpha hydrolases-likeFamily: PP-loop ATPase88 c3hv2B_
not modelled
8.9
17
PDB header: signaling proteinChain: B: PDB Molecule: response regulator/hd domain protein;PDBTitle: crystal structure of signal receiver domain of hd domain-2 containing protein from pseudomonas fluorescens pf-5
89 c3dzdA_
not modelled
8.9
8
PDB header: transcription regulatorChain: A: PDB Molecule: transcriptional regulator (ntrc family);PDBTitle: crystal structure of sigma54 activator ntrc4 in the inactive2 state
90 c4ktqA_
not modelled
8.8
25
PDB header: transferase/dnaChain: A: PDB Molecule: protein (large fragment of dna polymerase i);PDBTitle: binary complex of the large fragment of dna polymerase i2 from t. aquaticus bound to a primer/template dna
91 c1p8dD_
not modelled
8.7
55
PDB header: membrane protein/protein bindingChain: D: PDB Molecule: nuclear receptor coactivator 1 isoform 3;PDBTitle: x-ray crystal structure of lxr ligand binding domain with 24(s),25-2 epoxycholesterol
92 d2cdqa1
not modelled
8.6
13
Fold: Carbamate kinase-likeSuperfamily: Carbamate kinase-likeFamily: PyrH-like93 c2pw0A_
not modelled
8.6
24
PDB header: unknown functionChain: A: PDB Molecule: prpf methylaconitate isomerase;PDBTitle: crystal structure of trans-aconitate bound to methylaconitate2 isomerase prpf from shewanella oneidensis
94 c3r0jA_
not modelled
8.5
22
PDB header: dna binding proteinChain: A: PDB Molecule: possible two component system response transcriptionalPDBTitle: structure of phop from mycobacterium tuberculosis
95 d1ckqa_
not modelled
8.5
15
Fold: Restriction endonuclease-likeSuperfamily: Restriction endonuclease-likeFamily: Restriction endonuclease EcoRI96 c1k7lD_
not modelled
8.4
55
PDB header: transcriptionChain: D: PDB Molecule: steroid receptor coactivator;PDBTitle: the 2.5 angstrom resolution crystal structure of the human2 pparalpha ligand binding domain bound with gw409544 and a3 co-activator peptide.
97 c1k7lB_
not modelled
8.4
55
PDB header: transcriptionChain: B: PDB Molecule: steroid receptor coactivator;PDBTitle: the 2.5 angstrom resolution crystal structure of the human2 pparalpha ligand binding domain bound with gw409544 and a3 co-activator peptide.
98 c1k7lF_
not modelled
8.4
55
PDB header: transcriptionChain: F: PDB Molecule: steroid receptor coactivator;PDBTitle: the 2.5 angstrom resolution crystal structure of the human2 pparalpha ligand binding domain bound with gw409544 and a3 co-activator peptide.
99 c1k7lH_
not modelled
8.4
55
PDB header: transcriptionChain: H: PDB Molecule: steroid receptor coactivator;PDBTitle: the 2.5 angstrom resolution crystal structure of the human2 pparalpha ligand binding domain bound with gw409544 and a3 co-activator peptide.
