PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2lkyA_

Fold library id	PDB Header	Molecule	Title
c2lkyA_	PDB header: structural genomics, unknown function	Chain: A: PDB Molecule: uncharacterized protein;	PDBTitle: solution structure of msmeg_1053, the second duf3349 annotated protein2 in the genome of mycobacterium smegmatis, seattle structural genomics3 center for infectious disease target mysma.17112.b

Links to external resources
Added to library: Sat Nov 19 19:39:50 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G P G S M V N A F L A K I A A W L N A G Y P E G V P G P D R V P L L A L L T R R L T N D E I K A I A E D L E K R A H F D H I D I G V L I T Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S
S S
T T T
S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . .

Sequence M T D E M P R E E D I E R V R R H L A L Q G W P L D D P R D G E E P D G E S G G P R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T
G G G S
S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	P	G	S	M	V	N	A	F	L	A	K	I	A	A	W	L	N	A	G	Y	P	E	G	V	P	G	P	D	R	V	P	L	L	A	L	L	T	R	R	L	T	N	D	E	I	K	A	I	A	E	D	L	E	K	R	A	H	F	D	H	I	D	I	G	V	L	I	T	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S		S																S	S															T	T	T																				S				S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Sequence	M	T	D	E	M	P	R	E	E	D	I	E	R	V	R	R	H	L	A	L	Q	G	W	P	L	D	D	P	R	D	G	E	E	P	D	G	E	S	G	G	P	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T																	T	T			G	G	G	S		S	S