Phyre 2 alignment of P76298 with c2prgC_

Return to main results | Retrieve Phyre Job Id

Job Description | P76298
Confidence | 11.11% | Date | Thu Jan 5 12:21:40 GMT 2012
Rank | 64 | Aligned Residues | 13
% Identity | 54% | Template | c2prgC_
PDB info | PDB header:complex (thiazolidinedione/receptor) | Chain: C: PDB Molecule:nuclear receptor coactivator src-1; | PDBTitle: ligand-binding domain of the human peroxisome proliferator2 activated receptor gamma
Resolution | 2.30 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 538 | . | 540 | . | . | . | . | . | . | . | . | . | 550
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | H | K | V | L | Q | N | L | L | D | E | K | V | P
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | H | K | I | L | H | R | L | L | Q | E | G | S | P
Template Known Secondary structure |  | T |  |  |  |  |  |  |  |  | S | S |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 687 | . | . | 690 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions