>ss_pred
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEEEEEEEEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEHHHCCCCCEEEEEEEECCC
>ss_conf
94137761044444344567989999999999999721847899999999999999999999632780342101389999999998542898899985388776315789999862550034799999999999999988615772467777666543076135557888755899989999999999999966554430002201239999999999999899999873599989998530154467689998789999997544236307831258999999870881589999999999833587479999999999999998531211111012211122345665343121134563032410112674210345218999999999999980974871698635889987689999325751057407928865287665555873244877888501059678727996699271289999999999999749986098999999999987516999986200499889999999874179873148999999986312568989999999999799999973188983899988857999999973125899988999999999999998773499829997810459999998742588538841335899668998873489
>batch____
MSNLAAMLRLPANLKSTQWQILAGPILILLILSMMVLPLPAFILDLLFTFNIALSIMVLLVAMFTQRTLEFAAFPTILLFTTLLRLALNVASTRIILMEGHTGAAAAGKVVEAFGHFLVGGNFAIGIVVFVILVIINFMVITKGAGRIAEVGARFVLDGMPGKQMAIDADLNAGLIGEDEAKKRRSEVTQEADFYGSMDGASKFVRGDAIAGILIMVINIVGGLLVGVLQHGMSMGHAAESYTLLTIGDGLVAQIPALVISTAAGVIVTRVSTDQDVGEQMVNQLFSNPSVMLLSAAVLGLLGLVPGMPNLVFLLFTAGLLGLAWWIRGREQKAPAEPKPVKMAENNTVVEATWNDVQLEDSLGMEVGYRLIPMVDFQQDGELLGRIRSIRKKFAQEMGFLPPVVHIRDNMDLQPARYRILMKGVEIGSGDAYPGRWLAINPGTAAGTLPGEATVDPAFGLNAIWIESALKEQAQIQGYTVVEASTVVATHLNHLISQHAAELFGRQEAQQLLDRVAQEMPKLTEDLVPGVVTLTTLHKVLQNLLDEKVPIRDMRTILETLAEHAPIQSDPHELTAVVRVALGRAITQQWFPGKDEVHVIGLDTPLERLLLQALQGGGGLEPGLADRLLAQTQEALSRQEMLGAPPVLLVNHALRPLLSRFLRRSLPQLVVLSNLELSDNRHIRMTATIGGK
>UniRef50_Q9ZM40(6-729:733) Flagellar biosynthesis protein flhA n=25 Tax=Epsilonproteobacteria RepID=FLHA_HELPJ  E=1e-140 s/c=0.69 id=44% cov=96%
---------------------LALVVFVIAILAIIIVPLPPFVLDFLLTISIALSVLIILIGLYIDKPTDFSAFPTLLLIVTLYRLALNVATTRMILTQGYKGPSAVSDIITAFGEFSVSGNYVIGAIIFSILVLVNLLVVTNGSTRVTEVRARFALDAMPGKQMAIDADLNSGLIDDKEAKKRRAALSQEADFYGAMDGASKFVKGDAIASIIITLINIIGGFLVGVFQRDMSLSFSASTFTILTIGDGLVGQIPALIIATATGIVATRTTqnEEEDFASKLITQLTNKSKTLVIVGANLLLFATIPGLPTFS-LAFVGTLFLFIAWLISREGKDglltklenylsqkfgldlSEKPHSSKIKPHApTTKTKTPEEIKREEEqaidevlkiefLELALGYQLISLADMKQGGDLLERIRGIRKKIASDYGFLMPQIRIRDNLQLPPTHYEIKLKGIVIGEGMVMPDKFLAMNTGFVNREIEGIPTKEPAFGMDALWIDAKNKEEAIIQGYTIIDPSTVIATHTSELVKKYAEDFITKDEVKSLLERLAKDYPTIVEE--SKKIPTGAIRSVLQALLHEKIPIKDMLTILETITDIAPlVQNDVNILTEQVRARLSRVITNAFKSEDGRLKFLTFSTDSEQFLLNKLRENGTsksllLNVGELQKLIeGVSEEAMKVLQKGIAPVILIVEPNLRKALSNQMEQARIDVVVLSHAELDPNSNFEALGTI---
>UniRef50_Q56338(29-693:707) Flagellar biosynthesis protein flhA n=5 Tax=Treponema RepID=FLHA_TREPA  E=1e-106 s/c=0.58 id=40% cov=93%
-------------------------------------PLPTQILDALMAFNLIFNLLILLMVLFVEKPTDFSVFPSLLLTSTVFGLGLNVSSTRLILT---LGDRFSGYMIRAFSSFVVGGSgtqgLVIGFTVFIILIAVQAFVITKGATRIAEVAARFTLDFNATKSMSIDAEYNAGVITEEEARERKRQIQREADFFGAMDGASKFVSGNVKIGIFITIVNVIAGLIVGVIFRREGFQAALQTYTNLTIGDGLLAQLPSLLLSVATGFIVTRSSDQGSFGQNVQEQFSKSALVYFIGSGALIVMAVLPGFPHsiLFFMAVCFAFVGLQLRKRERvhvqehEMQKSSDKKGMQQTQDST---SEMGPIVPLDPLSLELGYGLIPLVDKEKGAELLSRITVIRKDAALDLGLVAPKIRIIDNMRLDPSSYCFKIQGLEVARGKLRLGWFLAIKSGQVTEEVPGERTIDPTFGLPAVWISEENRDRAERVGYTVVAPSAIIATHLTQVIRTNAADILGRQNVQMIIDALRKEYPAVVDD-VTQKCPLGKIQKVLQGLLREQVSIRNTVAIFETLADFAST-SDTVPvpiLIEKVRQRLGRQICLQYADEQNVLHVMRLDSSLETFLSEKIALTVDSLSILTLSLDEQRQvlQAVrtvfvpTRQE--GYIPVLLTTDTIRSAMWNLFFSDRIEIAVMSYKEVSTDMRIETVGVV---
>UniRef50_A1JU76(22-697:704) Low calcium response locus protein D n=74 Tax=Proteobacteria RepID=LCRD_YERE8  E=1e-101 s/c=0.55 id=36% cov=93%
-------------------------VLLLAVVFMMVLPLPPLVLDILIAVNMTISVVLLMIAIYINSPLQFSAFPAVLLVTTLFRLALSVSTTRMILLQ-----ADAGQIVYTFGNFVVGGNLIVGIVIFLIITIVQFLVITKGSERVAEVSARFSLDAMPGKQMSIDGDMRAGVIDVNEARERRATIEKESQMFGSMDGAMKFVKGDAIAGLIIIFVNILGGVTIGVTQKGLAAAEALQLYSILTVGDGMVSQVPALLIAITAGIIVTRVSSEdsSDLGSDIGKQVVAQPKAMLIGGVLLLLFGLIPGFPTVTFLIL-ALLVGCGGYMLSRKQSrndeanqdlqslltsgsgAPAARTKAKTSGANK------GRLGEQEAFAMTVPL-LIDVDSSQQEAleaiALNDELVRVRRALYLDLGVPFPGIHLRFNEGMGEGEYLISLQEVPVARGELKAG-YLLVRESVSQLELlgiPYEKGEHLLPDQETFWVSVEYEERLEKSQLEFFSHSQVLTWHLSHVLREYAEDFIGIQETRYLLEQMEGGYGELIKE-VQRIVPLQRMTEILQRLVGEDISIRNMRSILEAMVEWGQKEKDVVQLTEYIRSSLKRYICYKYANGNNILPAYLFDQEVEEKIRSAVrQTSAGsylaLDPAVTESLLEQVRKTIGDLSQIQSKPVLIVSMDIRRYVRKLIESEYYGLPVLSYQELTQQINIQ--------
>UniRef50_P35654(23-686:715) Harpin secretion protein hrpI n=54 Tax=Gammaproteobacteria RepID=HRPI_ERWAM  E=1e-100 s/c=0.56 id=39% cov=90%
-----------------------GAAIVMSIVFMMIIPLPTGLIDVLIALNICISSLLIVLAMYLPKPLAFSTFPSVLLLTTMFRLALSISTTRQILLQQD-----AGHIVEAFGNFVVGGNLAVGLVIFLILTVVNFLVITKGSERVAEVAARFTLDAMPGKQMSIDSDLRAGLIEAHQARQRRENLAKESQLFGAMDGAMKFVKGDAIAGLVIVFINMIGGFAIGVLQNGMEAGAAMHIYSVLTIGDGLIAQIPALLISLTAGMIITRVSAdgqqvDANIGREIAEQLTSQPKAWIMSAA--GMLGfaLLPGMPTAVFVIISAIALGSGlfqlWRIKQQDSQQQAD-------------ELHAQQLAPEDN-GYQDLRRFNPtrayLLQFSQEHlnseaaeSLIQHIRRLRNRLVYHFGFTLPSFDIEFSPALAADEFRFCVYEIPLVTA-TFAVEQLAVRTssieihladGESDGQIqPGQAERDEH---HWCWLppQHPLLQQEDRRCWN---AQQLIMLRMEQAIHQSGAQFIGLQESKSILNWLESEQPELAQEL-QRIMPLSRFAAVLQRLASERIPLRSVRTIAETLIEHGQHERDSAALTDFVRIALKEHICHQ-YQQPNGLNVWLLTPETEELLRDSLRQAQsetffSLAQEYGINLLNQMRSAFPPYDNHHA--LILVAQDLRSPLRALLKDEFHAVPVLSFAELTSN------------
>UniRef50_D2UDE8(24-703:703) Probable xanthomonas secretion apparatus protein n=1 Tax=Xanthomonas albilineans RepID=D2UDE8_XANAL  E=9e-94 s/c=0.51 id=38% cov=93%
--------------------------LIIMIIGMLVMPLPPGLLDFLIAVNMIGGVLVLMSALHVVNMLSLSTFPAIVLLTTLFRLALSISSCRLILMYGH-----AGQIIQTFGEFVIGQNIVVGLVIFSIVTIVQFIVITKGAERVAEVAARFSLDAMPGKQMSIDADFRAGVIDGDGVRARRSALERESQLYGSFDGAMKFIKGDAIAGILIIFINMIGGIVIGMIKNHLSFSESMSTYSILSVGDALVGQIPALLISMGAGFLVTRISgSEQNLGHDIVSELLSSSPVLLISSGLSALIGLLPGFPLPVFLTVSAS-LGFFCWSRWRaERSASAEgrhanaGRPALQALGAGTAQAD-ADVQADTDTAF-LGHPLVvilphacahtPSLSPQNLAT------SLHARVFDEVGLLLPTIVvgfaaadaiVSDAQD--DARQRVVIRINDVDAAvlyIAFDGVRLVGDSDLLLGLGMHVSRLIDCDGEPAEWV---MAQPAQLQDIGIAFRSALDELHDQFItvILRNCSEFFGIQETKNLLDMLDSRYPELLKE-VYRQIPVQKLCEILRRLLTERVAIRNMKLILETLANWGTREKDSIVLTEHVRIALGRYISHR-IARNGHMKVIVLTPEFEEKVRQGIKHTStgtflNLTPTVANELVDRITVALNQLHAVRRDFVLLASMDVRRYARTLIESRFPGLQVISFGEVSDNVELDVIGNI---
>UniRef50_A6GN34(9-689:705) Type III secretion protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GN34_9BURK  E=2e-92 s/c=0.50 id=35% cov=94%
-----------ARLASARSEVVGASLIILMIV-MMVIPMGPGILDVLLAINISVSVVLVISAVLIETPLAFSSFPALLLMTTLFRLSLTISTTRQILLEGD-----AGHIVQTFGEFVVGGNVAVGLTIFLIISVVNFLVITKGSERVAEVAARFSLDGMPGKQMSIDSDLRAGLITQAVAKQRRSDLEKESQLFGAMDGAIKFVKNDAIAGLVITVVNLLGGLTVGMMQKGMSFSEAGSVYTILSVGDGLVAIIPSLMVSIAAGLIVTRVTKGEadgsNTAQDMLKDLSRNSNALQISGIFCFLFAFVPGMPSYVFLATSATLLCGWYFISRKTDKAEEVDVSTQFSD---MLSASGKSIKMDDILHTNtfapLEVRLPVDIEPTAANQIQNICRIARNRRVEQLGILFPLFEFINHTESFVEFYvygvpamsiHISEKRLSIRSDqslvQAVPGIEFVIEKDVVTGKY--DMLCDP--------LQKTLLDQHKLEYLTF---ETRLVSQIEALLVQKVDQLFTLNEYQRhmttLGDKYTEQLKEL-ERVLP----VTKVVEVLQRLLGESVSIKNMRSILNSLIEWGQRERDPMVIAEQVRRGLFEQICHQH-THERKLKVFMLGVEFEQLIRESSRSDGNgsfvdIDSSSLNELIEIVEEQCRPHLVGNYVPAIVCSMDCRVFFRQIIQDSLFIIPVLSHQEISSNMEIQVLGNI---
>UniRef50_O85633(10-671:675) EscV protein n=33 Tax=Enterobacteriaceae RepID=O85633_ECOLX   E=1e-90 s/c=0.51 id=35% cov=94%
--------------KAESYHDLILALFFFMAVMMMIIPLPTVVVDIIIAINISTALLLLMLSIYIKNPLELTSFPTILLITTLMRLSLSVSTTRLILLHHD-----AGDIIYSFGNFVVGGNIVVGLVIFTIITIVQFMVITKGAERVAEVSARFSLDGMPGKQMSIDGDMRAGVIDPLEAKVLRSRVQKESQFYGSMDGAMKFVKGDAIAGIIIVLVNLFGGVLIGMWQFDMPFSAALSLFSVLSVGDALVAQIPALIISVTAGVVVTRVpgesEKEENLAGDIVQQVSVNSRPFLISAALMLVMAIIPGFPALVFLFLAVCLLGIAWKLQKKRTFGTGNNKDAMGAD-------------LSNSQNISPGAEplILNLSSNIYSSDITQQIEVMRWNFFEESGIPLPKIIVNPVKNNDSAIEFLLYQ--ESIYKDTLIDDTVYFEAGHAEISFE---FVQEKLSTNSIVYKTNKTNQqlAHLTGMDVYATTNDKITFlLKKLVLSNAKEFIGVQETRYLMDIMERKYNELVKEL-QRQLGLSKIVDILQRLVEENVSIRDLRTIFETLIFWSTKEKDVVILCEYVRIALRRHILGRYSVSGTLLNVWLIGSDIENELRESIrQTSSGSYLNISPE---RTEQIIGFLKNIMNPTgngVILTALDIRRYVKKMIEGSFPSVPVLSFQEVGNNIELKVLGTV---
>UniRef50_P35656(30-608:690) Hypersensitivity response secretion protein hrcV n=91 Tax=Bacteria RepID=HRCV_RALSO  E=3e-85 s/c=0.55 id=40% cov=80%
-------------------------------------PLPTMLIDALLGLNITLSVVLLMVTMYIPSATSLSAFPSLLLFTTLLRLSLNIASTKSILLH-----ADAGHIIESFGKLVVGGNLVVGLVVFLIITTVQFIVIAKGSERVAEVGARFTLDAMPGKQMSIDADLRAGHLSPEEARKRRALLAMESQLHGGMDGAMKFVKGDAIAGLVITLVNILAGIVIGITYHNMTAGEAANRFAVLSIGDAMVSQIPSLLISVAAGVMITRVSDEEqahkqsSLGMEIVRQLSTSARAMFTASALLMGFALVPGFPSFLFVALATLIFVFGYTLRNRAKEGdgdegdalPALLREGSKGKAPTIAEqAPSFTVPVGVRLGAELAKGLdVPALDtaFQQG----------RHALAEALGLPFPGIAIWKADALQPDSYEVRVHDIP-GEPVAVPDGHLLIpdlpealrAQAVEAAGLPNH----PA----PHWIAPAHVAQDAALSATGQRVERVIADHVVHVLRRSAHLFVGLQETQWMLERVTTDYPGLVAE-AQKAVPAQRIADVLRRLLEEQVPIRNMRAILESLVVWGPKEKDTLMLVEYVRGDLGRQIAHQATGGTRQMPAILLDLSVEQTVRQAIK-----------------------------------------------------------------------------
>UniRef50_Q11M51(30-669:691) Type III secretion FHIPEP n=1 Tax=Chelativorans sp. BNC1 RepID=Q11M51_MESSB  E=9e-82 s/c=0.48 id=34% cov=89%
-----------------------------------ILPLPPAAMDLMITLNVSASIIILLMSLQMHNPVQFSTFPALLLVTTLFRLSISISTTRLILLEGD-----AGRIVETFGQVAMGGNLAVGLVTFLIITVVQFLVITKGADRVAEVGARFTLDGMPGKQMSIDADVRAGNMDQLDARHARQNLEREAKLFGAMDGAMKFVKGDAIAGLVITVINLVGGVAIGMAQRGVGFGEALSLYALLTVGDGLVAQIPALLISVAAGNMVTRVTNPNgmDLGAEIAQQFVANRRTIVMAGIIIALFGLVPGFPTWIFVSVGSAMTGGVIWTIRRQH------RDVLSAQTDWSLRLDLLQRQCAEiamRTGAKEAVRLIlPKEIYKLDvTAFFSAFEAVRISIAQEYG-IPTGYWLFEVDEGSPHSYQI------------YVNQELADCGIFRADSLFVKAHTSYLDALGIPWLSGFGRREGALvptdQEQRLAEENIVywrpmeqLLMHLKRVAVERLDVMASLQNITAILNEVQTNNPALVGDLREAASN-NQIAGVIRNLLRERIPVTSRVRILEGILKWSQKRPDPGYLAQKVRIEIADFITKR-FAADGFLPVVVVSPTVESLMREGMRNTEEgnfliLEPSISAYIAKQAKQICGEEFRRGHDPVLIMQQDVRLAMHNILYEHGIHLPVLAYQEIT--------------
>UniRef50_A0LC38(11-705:708) Flagellar biosynthesis protein FlhA n=25 Tax=Bacteria RepID=A0LC38_MAGSM  E=0 s/c=1.23 id=47% cov=99%
-----AAIGLPLKLQGislKKYSDLYMAVGVIVVMAVMIIPLPSELLDFFLSINIAIAIVILLTTIYIHKPLDFSSFPSVLLLATMFRLALNIATTRLILLHGGEGESAAGEVIRAFGQFVVGGNYVVGVIIFSILVIINFIVITKGAGRIAEVAARFTLDKMPGKQMAIDADLNSGLITEDEARRRRSEIEQESEFFGAMDGASKFVRGDAIAGILITLINIVAGFIIGVAQLDLSAAQSAQIYTILTVGDGLVAQIPTLVISAGAGFLVTRASGDANMADHVSQQMTAQPRVILMSAVVLGLLAIIPGMPTVAFGLLAIAMGSWSWYLFRRaeQRDEAVQHKAMAEAEAEAEAEEPIESYLALDLLRLDVGYGLISLVDETQHGDLLDKIRSIRRQFAQDMGFVVPPIHIKDNLQLKPGEYSYLVKGVEVGQGELRPGSYLAMEGGDVTGQIHGIATVEPAFGLPAQWIASGERERAEMLGYTVVDASTVLATHITEMVHNHAHEMLTRQEVQNLLDLVSKNQPKLVEELIPNIVSLGDVQKVLQGLLRERVSIRDMGTILETLADYGKIIKQPQQLVELVRQSLSRSIVRRYLDDEGTLTALVLGPDAENLVAEAIVSGDygsylSLSPRSAQQLLTRVRSEVEKAATVVVQPVLITGSRVRPFVKQALEGVLPHLVVLSQNEIPANVSVSSLGSI---
>UniRef50_C8WWG6(5-679:682) Flagellar biosynthesis protein FlhA n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WWG6_ALIAD  E=0 s/c=1.22 id=43% cov=97%
-------------LKRTDLMVM---LFVLWTIVMIVIPIPRPLLDVLILFNMFVSMTILLVAMNTSEPLEFSIFPSLLLVTTLYRLSLNISTTRLILSQGN-----AGAVIQTFGNFVIGNNPVVGFIVFLIIIIVQYVVITRGAERVAEVAARFTLDAMPGKQLAIDADLNAGLIQEAEARRRREKIQQEADFYGAMDGASKFVKGDAIASMVIVAINVVAGLIIGVAMQHDSFSEALHTYTMLSVGDGLVSQIPALLLSTATGLMVSRAATDQNMGADVVKQVFGYARALYVVSGAIVLLGLITPIGILPVIPIAGGATLMARRAERSRALQQKREEEEKARQKRSEAKKPENVYQLitVEPVEFEFGYGLIPLVDARQGGDFMERVAMIRRQLATDLGVVLPMVRMRDNVLLKPTQYVIKLKGVEVARGEILMGHWLALSPGIDNPEVKGIPTKDPTFGLPALWVTGEMKLRAEASGYTVVDPPSVMATHLTEVLRRHAHELLGRQQVKELLEHLKQTHPAVVEDVYPGTLSLGHIQRVLCNLLEEGVPIRDLVTILEALADAGRQTQDVDQLTEKVRQRLARHICAQYLQGEDGLTVLTFDPALEREMQQAVveqggALSIGLEPQKAQAVFRKLKELWTELQGTGKSPVLLVHPRIRLPLSRLVRRYVPDLPVLSFAELDPSISIHSGGVV---
>UniRef50_C4Z5H9(4-677:679) Flagellar biosynthesis protein FlhA n=2 Tax=Bacteria RepID=C4Z5H9_EUBE2  E=0 s/c=1.16 id=39% cov=95%
-------------------------IYLLAAVLFFIISIPSWLLDILLAINILVALVVLFNSLFAKEVLDMASFPTMLLFTTIFRISLNVSSTKLILKNGY-----AGKVVDTFGKFVGSGNLVIGIIIFIILIIIQFIVINKGSERVAEVTARFTLDAMAGKQMAIDSDLNTGAITDKEAAERRKKLQQENSFFGSMDGATKYVKGDATAGLIITGINLIGGIVMGMAYGGLTINDALSKYTILTIGDGLCSQIPSLLISLATGVLVTKASSEGELGDEIIGQLFSMDRVLLMVGAALILLGVTTPLPWYIFIPLGMALIIYGRKLSAKAGETAIEESAEQEETEASEIRKPENVVSLlnVDPIELEFGYGIIPLADVNQGGDLLDRVVMIRRQIALELGAVVPIIRLRDNIQLNPNQYVIKIKGIQVSEGEILFDHYMAMNPGYVEEEITGIPTFEPSFHLPAIWITESQRERAESLGYTVVDPPSIIATHLTEVIRQHIAELLTRQDVQNLINNIKDNNTTLIEELVPKLMGVGEIQKVLQNLLEEGISIRDLVTIFETLADHAAVTRDPDILTEYVRQALKRAISSKYFLTGEVTNVVTVDPAIEQEIMNSVKNTEqgsylSLDPERSKKIIEALGNELKKLEDMGKNPIVITSPIVRMYFRNLAKDYYKDIIVISYNEVESNVELQSVGMV---
>UniRef50_O67265(7-675:678) Flagellar biosynthesis protein flhA n=3 Tax=Aquificaceae RepID=FLHA_AQUAE  E=0 s/c=1.15 id=44% cov=96%
------------------WIILA----VVLILSAIIIPIPALLLDLLLTLSITFSLTVLLLTFFIKNPLEFSSFPSVLLLGTLLRLSLNIAAARRILLHGHEGTHAAGKVIEAFGKLVAGGDVVVGLIVFLIFIVINFIVITKGAERISEVAARFTLDALPGKQMSIDADLNAGLITEEEAKRRRQELEKEANFYAAMDGASKFIRGDAIAALIILFLSLVGGLLIGIGIRGMDLASAVKTYTILSIGEGLASQVPALLLSTAAGVLTTKMSSRENLGEAISEELTKQPRALLFSAGVLGFIGLIPGLPTLPFLAMSAILAG-AYYLVQQSLKERELKELEKLAQEKTKEKEEEGEelIPQPEPITLEIGYALIPLVDESQGGQIPKKIKNLRKQIAKEYGVIVPLIHIRDNLRLKPNEYRILIKGIEIDRYELMPGHYLAVNLGNAKGPIEGIETYDPAFKIKAYWITEDKKEEAQKLGYMVVDAETVLITHLSEVIKRNLHELLTRNEVMELIEMLSKKYPKVVKEIVPEQVPISIIHRVLQNLLREGIPVNDLLTILETLADYIEQTKDPDLLTEYVRQALSKRITRMYL-TNGTLYAIALSPKVEAKLVKFLKENREDEFIdyVLNTLLPKIKNEIVKFAQYGAVPVLLTSGEVRRFVRKTIEPYLSELAVLSYNELEKQVNIKIIGIV---
>UniRef50_A1T0L5(3-694:695) Type III secretion FHIPEP protein n=5 Tax=Gammaproteobacteria RepID=A1T0L5_PSYIN  E=0 s/c=1.07 id=42% cov=98%
------LLKKFKNIKLS----LAIPATLLMILAMVMLPLPPFLLDIFFTLNIVLAIIVLLVSTTTKRVLDFSVFPTLLLIATLMRLTLNVASTRIVLIEGHKGGNAAGDVIQAFGDVVIGGNYVVGMVVFIILMIINFVVITKGGERISEVSARFTLDALPGKQMAIDADLNAGLINQEQAKTRRQETGDEAEFYGSMDGASKFVRGDAIAGLLILFINLIGGVLIGIFSHDMSAAESFQTFALLTIGDGIVAQIPSLLLATSAAVIVTRVSnSDSDISQTIKKQILSTPSVLYASAGVMTIIGLVPNMPHLPFLIFAALLGFVGWQQSKIQEESQLEEvnQSVNPLQSPSEEVLDWQVVTDIEPITLTLGFKLVSLLNIENGAPLLKSIKGTRKSLSEEVGFLIPEVTIRDNLSLKPDEYVIFIDGEEMERGTVKTGYLMAVSSDDSFGSIDGIIGQDPAYLMPALWITPENKSLAINYGYQVISLADVIATHINKVLSANLASIFNYDDIKAMNDKLGLIHPQLSESLSAAVTPGLQLQ-IIKNLLIDQVPVKNKKVIANTILDSINKTKDPILISSDVRAALKRTILSLISPDSKTLDLFVLSSELDNILRNAIAQVQTqnpqtsldevpIDPNLLAQLQQNLPNITQQMMQQGLVPILLVSPTVRPMMSKFSRAFSRDLIVLSFNEIADDYQINAIGNL---
>UniRef50_Q12T85(13-672:680) Type III secretion FHIPEP n=1 Tax=Shewanella denitrificans OS217 RepID=Q12T85_SHEDO  E=0 s/c=1.04 id=35% cov=94%
------------------------AVGVIAILMLLFVPIPATVLDVLIILNISFALLILLLTFYSERPLDFSTLPSVLLLATLFRLGLNIASTRLILTDGN-----AGKVISAVGSYVVAGNYVIGLVIFFILVVVQFLVVTNGAQRVAEVTARFTLDSMPGKQMSIDADLNMGIIDEKQAQERRAYIEKEANFYGAMDGATKFVKGDAIASIIIILINIIGGLAIGVAQAGLPWQQALHIYTLQTVGDGIVTQIPSLIIAVGTGIIITRAATQGNLADQLFGQIVTHPFTLTLVAVVISSAAFLPGLPSLTLILVGITFALFGYFAHKKKQLKLIE-------KTFREFENTKKTSTQESLLQVAFSSQIWPQI-LAEETEIQRQFSRFKSEFESKYGLFLPELLLKAESVLKADEYSIRLSNIEFASGVLHPDKMMVIDPQNKLDKKMGLAAVEPAYGLNALWVDADKAKDIKQGGMTVVEPISVLMTHITEFVKSHSAEFVTRQFVDQLVAEQREINEVLVSEVIPTQLAIADVQQIFTHLVQEKVCLHNANHIFEVLADKARHEKDVQLLTEFVRQRLRNQLTSLLLDNDRTLNIISIAPLLERALLNGaanvITKGLQISPTDLDSLVKQAVLFVEKAISLGAEPVLLVNPTIRRPLWQLLNRTVPLLHVISVNEVPHHIKLNSLGVI---
>UniRef50_A8LMR6(16-696:698) Flagellar biosynthesis protein FlhA n=18 Tax=Rhodobacterales RepID=A8LMR6_DINSH  E=0 s/c=1.00 id=36% cov=96%
-------------------------IMLLGIIVMMILPMPSIVLDIGLALSFSLSILIFTVTLFINRPLDFSAFPTVLLASLMLRLSLNVSSTKLIIGQGHEGTHAAGGVIEGFANFVMGGSIFLGLVVFLVLLIVNFIVITKGASRMAEVGARFALDGMPGKQLAIDADMSAGAIDHAEAKRRRETEQAETTFFGSLDGASKFVKGDAVAGLLITALNLIMGLVIGMTLHDMPLGEAFRTYSILTVGDGLVTQIPAVIISIAAALLLAKGGSDEKADIAISAQFGRHPAALATVGFMMFLFALIPGLPFIPFTLGAMVLGGAALYLYRKTPDSP-EGEDKPAAQTDRPREATMGDILDVDEIHVTFSTDLVSSILDAAGG-LDTRIQSMRNHIASEFGVILPEIRLTDDAGLPDASYAIFLHGVEEARGQLYPDRILLLLPEEGFREPTEYDVKEPVYGAPARWIEKSERDEVSLLGMTTVASTEVLATHLLEVVKGNLARLMTLKALRKLIGELTNTADAarneanrlLVEELIPDRVTNDTLIAILRLLLEERVSIRNLPLILEAIAEAKQISSAIDGIHEYVRQRLSFQIVSDLKRSDGTIPLIQLAQEWEQIFaansigREDGAADVALPPDLFQKLIQNASEKVVKANESGVNPAIVTSVRRRRFLSTVLASKGLQVPVLSFEELGKTNRPSLVGVV---
>UniRef50_P74856(22-669:681) Secretion system apparatus protein ssaV n=63 Tax=Gammaproteobacteria RepID=SSAV_SALTY  E=0 s/c=1.00 id=34% cov=92%
--------------------------VLLIAIVMMLLPLPTWMVDILITINLMFSVILLLIAIYLSDPLDLSVFPSLLLITTLYRLSLTISTSRLVLLQHN-----AGNIVDAFGKFVVGGNLTVGLVVFTIITIVQFIVITKGIERVAEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARTLRQHVQQESRFLGAMDGAMKFVKGDTIAGIIVVLVNIIGGIIIAIVQYDMSMSEAVHTYSVLSIGDGLCGQIPSLLISLSAGIIVTRVPGEkrQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPFITLAFFSALLALPIILIRRK--KSVVSANGVEAPEKDSMV-----------PGACPLILRLSPTL---HSADLIRDIDAMRWFLFEDTGVPLPEVNI--EVLPEPTEKLTVLLYQEPVFSLSIPAQADYLLIGADASVVGDSQTLPNGMGQ-ICWLTKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHMGEFIGVQETRYLMNAMEKNYSELVKEL-QRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPREKDVLMLTEYVRIALRRHILRRLNPEGKPLPILRIGEGIENLVRESIRQTAmGTYTALSSRHKTQILQLIEQALKQSAKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEESLIQVVESI---
>UniRef50_B5Y7F7(8-671:671) Flagellar biosynthesis protein FlhA n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y7F7_COPPD  E=1e-180 s/c=0.96 id=34% cov=95%
-------------------------LFVIVGIFMLMVPVPSMVLDVLFAFNLVFSLLVLMISLYTRSATEFSSFPSLMLFAVFFHLVLIVSSARAILVTGNPGALA-----TAFGKLIMGqGNWVVGLVIFVVLLIVQYMVITSGQQRISEVAARFTLDAMPGRQMAIDADLSAGFITPEEARRQRDSLRKESDFFGAMDGASRFVRGETMASALAAVVNALGGMVVGLL-KGEAAVDALLHYLGVAIGVALQIAISSLALSLSAALLVARVSSEQSLGEEITSELMAFPGLVRILGIVLLVTSLLPGVPKLLLIPLGVLLIWFGRTPKpAAETALPEQVEAKRLYEQLSEPEAMLGFVGV-DAVELEFGYELLPLFDTTSGQDILDSIALLRKNLSEEFGFPIPGIRIHDNLGLKPNQYRIKLRGVTAGEGILEMGLLLAMGEGSDLEKVSGVPTKEPVFNLDAKWIPPSDKLKAEAAGLTVVDCGTIVITHLGEVLKSSLADLITRQNIKDIVDYVGRSHPAVVEEL-QQVASLGDVEFVFRYLLQERLPVRDVVRVFELITDSLRASRDLREAGELARKACVPYLLETLAEEEGTIKVITLKPDMERALIESYQPGSEIGFALSgenlRKIIDEIKKAWEMSHSYAENAVLVVHPRIRRALWELLsRQGLKELTVLSYNEIMDAKYV-VVGSVG--
>UniRef50_Q0B7U0(40-727:749) Type III secretion FHIPEP protein n=20 Tax=Burkholderiaceae RepID=Q0B7U0_BURCM  E=1e-161 s/c=0.83 id=36% cov=94%
--------------------------FIVSVVALFILPLPQAALDGMISLNLAASVVLLTVSTYVPSAVSFSSFPALLLFTTLFRLALNIASCKLILLHAN-----AGHVIDAFGRLVVGNNVVVGGVVFLVIAVVQFIVIAKGSERVAEVGARFSLDAMPGKQMSIDADLRAGIISADEARERRERLEQESQMHGAMDGAMKFVKGDAIAGLVIAFINIVAGIAVGTLMHGMDIGEALQRYAILTVGDGMASQIPSLLVSIAAGIVTTRVATRDTrqrqLGEQLGEQLGAHPRALLIAALVLAGFLVVPGFPKWSFALIALGLGAFAVTQLKRKTTAPSFNLIHIAGRIGATDDGQPAKVSHAAGVTSLIAVSLSDDLRTTLNlAQLQTALSSAKARVDADIGTVFPRITLNDDEGAPAGTYRIYLQDVLAAHGALKPGWLLW----DGVAPLPERAERQPaeAFGpfATALWIKPDGA----APDGKWLTSEGALAAHVEQVVRQHADELLGIQETQALVHLVRREHPELVGELT-RLVPLQRVTEVLRRLLAEQVPIRNLRVIFESLITWAPNEPdDVIALVELVRVDLRRMITDRHAGAARQLRVVLFEQNLQERIESAVMRTKqgnflALSSAIKQDIGEQVRAIVqaaqaagagGHGNPQGAPRlAVMVALGARRYVKTILQPVLPELAVLSYQEVEEDVQLHTVG-----
>UniRef50_B1T6S7(24-667:679) Type III secretion FHIPEP protein n=2 Tax=Burkholderia RepID=B1T6S7_9BURK  E=1e-140 s/c=0.78 id=35% cov=91%
-------------------------IAVLGVLCLIIFPLPIPALDVVLALNLTISVLILALSVYIPHALHLSTFPTLLLVATLFRLGLNIATTRQILLNGY-----AGDIITTFGKLVVGGDVVVGFVVFIIIAIIQFVVVAKGADRVAEVGARFSLDALPGKQMAIDADLRAGMISKADALERRRQLEQTSQFYGAMDGASKFVKGDAIAGLLIAIVNVVGGIVIGTAVNGHPLADTARLYTVLTVGDGLVSQIPSLLISFAAGILITRVAsidSATSVGADIGSQIASQPRAIFAAAVVAAGFALVPGFPTLAFLGLGVLLALLAALI----PRLSVMGRSTALARQHWARREGVATTVVEGDLGssVPLRVRLAPELFDQLKPLELDRLLLALRERFRESGVPYPGLKLASDRSLTDLGYAVDIDEVAIADGQLERTQGEGERKrGLSLPSLPGRAGAETGSQM---------------------EIEAMLVGRIGDAICAKPWRFLGIQEASYLQDALSRHYPQLV-NILAERIHLFVFRDVLVELLRTGVGIRNLRAIAEGLTKGSAQPNDLDGLVSSARQALSSQISGQWGGVERCIPIAVLAPDLEAVLRQRLIASGQIKFidlqvdeqhAFVQQVIADMQTTWRDHPGA----VLVTGQDLRRSVEALLRGGERGVTVLAVEEISDEVTYRVLHTI---
>UniRef50_Q9Z8I0(16-575:582) Flagellar Secretion Protein n=2 Tax=Chlamydophila pneumoniae RepID=Q9Z8I0_CHLPN  E=7e-85 s/c=0.57 id=26% cov=81%
----------------------------LSILVLIFLPLPQILLDFGLCISFALSLLTVCWVFTLNSSNSAKLFPPFFLYLCLLRLGLNLASTRWIVSSG-----TASSLIVSLGSFFSLGSLWAATFACLLLFFVNFLMVSKGSERIAEVRSRFFLEALPAKQMALDSDLVSGRASYKAVKKQKNALIEEGDFFSAMEGVFRFVKGDAIISCILLLVNVV---SVTCLYY--TSGYALEQmwFTVL--GDALVSQVPALLTSCAAATLISKIDKEESLLNYLFEYYKQLRQHFRVVSLLIFSLCCIPSSPKFPIVLLAS-LLWLAYRKEEPASEDSCIERAFSYVEGACPKEQESQFYQV---------------------------YRAASEEVFEDLGVRLP---VLTSLRIEERPW-LRVFGQNVYLDEMTPEAVLP-------------------------------------------------------FLRNIAHEALNAEVVQKYLEESERVFGIAVEDIVPKKISLSSLVVLSRLLVRERVSLKLFPKILEAVAVYQNSGDSLEILAEKVRKSLGYWIGRSLWDQKQTLEVITIDFHVEELINSSYSKSN---PVMQENVIRRVDSLLERSVFKDFR-AIVTSCETRFEMKKMLDPHFPDLLVLSHDELPKEIPISFLGIV---
>UniRef50_UPI000190D087(1-290:290) possible secretory protein (associated with virulence) n=3 Tax=Salmonella enterica subsp. enterica serovar Typhi RepID=UPI000190D087  E=9e-47 s/c=0.66 id=23% cov=33%
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ERLRSQFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGINPTIHQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHMLDQLEAKFPDLLKEVLRHA-TVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVINLVEHIRGAMARYICHKFANG-GELRAVMVSAEVEDVIRKGIRQTSG-------------------------------------------------------------------------
>UniRef50_P35620(2-675:677) Flagellar biosynthesis protein flhA n=43 Tax=Firmicutes RepID=FLHA_BACSU  E=0 s/c=1.08 id=43% cov=96%
---------------------LSVLISVVLIVAMLVIPFPPWLLSILIIINISLALIVLLTTMNMQEALQFSIFPSLLLLLTLFRLGLNVSTTRSILSHG-----EGGKVVETFGNFVVGGNVLVGLVVFIILIIIQFIVITKGAERVSEVAARFTLDAMPGKQMSIDADLNAGMITEQEAKHRREKVAREADFYGAMDGASKFVKGDAIAGIIIVMINIIFGIVIGMLQQGMSIQEAASHFTMLTVGDGIVSQIPALLISTATGIVVTRAASEGNLGHDITGQLFAYPKLLYVAAATIMLLGIFTPIGILLTGPLAGLLAFGAYTLSKSGKEKEEVDEILEEEAEVDELKSPESVVQLlhIDPIEFEFGYGLIPLADANQGGDLLDRIVMIRRQLALELGLVIPVVRIRDNIALQPNEYRLKIKGNEVAKGELLLDHYLAMSPTPEDDLIEGIETVEPSFGLPAKWISEAVKDEADMLGYTVVDPASVVSTHITEKIKQHAHELIGRQETKQLIDHLKESYPVLVEEVTPNPLSVGDIQKVLAKLLKEKVSIRNLVTIFETLADYGKLTTDSDLLTEYTRQALAKQITAQFAKENEVLKVVTCSGRVEKAIADGVQQTEhgnylSLEPDISESIVRSVAKEAEQLSLRQETAILLCSPPVRMYVKQLLERYFPDLPVLSYNELEANVEVQSIGVV---
>UniRef50_B1ZR28(2-695:712) Flagellar biosynthesis protein FlhA n=3 Tax=Verrucomicrobia RepID=B1ZR28_OPITP  E=0 s/c=1.04 id=42% cov=95%
--------------------------GLFITVLLLILPIPTVLLDFFFALNIGLSMLVLLAIIYIKDPPEFSSFPTLLLALTLFRLALNISSTRLVLVKGY-----AGQVIDAFGHFVIQGNYIVGAVVFLILVVINFVVITKGAGRIAEVSARFTLDALPGKQMAIDAELNAGIIDEVQATARRVKVQKEADFYGAMDGASKFVRGDAIAGIIITLVNVIGGFAIGVLQMGLSLGESLQKFTLLSIGDGLVSQIPSLVLSVAAGVLVTRASENNNLGHQLAGQMFRYPRAMKIAAGMLMCFGIMPGMPLLPFAGLAAFSWFLGKMLKDQEDKTghalgaeaaaaekaaagksagkGAAGGAAGAAAPASGPTEDVRKLIEVDVFAIELGYGLLNLANAKAGGDLLARVTGVRKTLAREKGIVVPPVAVRDNLELEPNDYRFLLRGKALARGQLHPNRWLAMNVAASKVRLRGVPTHEPVFNLEATWIDEPEKKTAEINGYTVVDPASVLITHLSETLKANAHHLLGRQEVQSLVDFLKQTQPALVAELLPDLVTLGIIQRVLQNLLRENISIVNLPLILEGIGDFASLSKNPDDLSELIRRRLGLYFVPEFEVRPGVVRAVTVDPRFEQWLGTKVQRSPtevglALDPATTRHVLDELNRRIAELTAQGHPTVLVVSSEVRLPLKRFFESSFPRLTVLAFQELPAATEIENAGIV---
>UniRef50_A9BHY7(2-700:710) Flagellar biosynthesis protein FlhA n=11 Tax=Thermotogaceae RepID=A9BHY7_PETMO  E=0 s/c=1.03 id=42% cov=96%
---------------------VIISILIVGIVVLMVIPIPTFLLDFLQLLNIIISIIILLATLYLKRALDISIFPSLLLVMTIFRLALNVSSTRLILLNG---KNFEGKVIRAFGDFVVGGNYIVGIIIFLILVIIQFLVITKGTERISEVAARFTLDAMPGKQMSIDADMSSGLINEEEARQRREDIRREADFYGAMDGASKFVRGDAIAGLIITLINLVGGLIIGMLQQGLTIAEAAEVFALLTVGDGLVAQIPALLISTSAGMIVSRAASKDNFGVDLIRQLTSDTRVLNIAGGIIIVLGLLTPIPVFPSLILGAGLLFVAYANRANEGQlayettgsagvgmgTSAAPKAEKRGvsggfAPPLTTPEEVSEVLQGDTIEVDIGYGLIPLADPDQGGDLLDRITVVRKQLAYELGIVISPIRIRDSVLLSSNEYVIKLRGVEVGRFELIPDRLLAINSGMATEELPGIKTKEPAFGLVAFWIDESLKEEAIEKGYTTVDAPSVFATHLSETIKKYAHEIIGTKEIEILIDGLRVNYANLVDTLIPTMLKMHELKKVLSELLYERVSIRNLPLIFESLIEGADKYgNNIENLVEYVRRSLGRQIVENLKSDDGELHVSALDPTIEKKLSESIRDSDSgrviiLEPEYSNILVQRISKSLENMMMKGFNPILICSKNIRYPFARFTLKFVQNISIVAYEEIPSDTSLNVNEIV---
>UniRef50_A5V5S8(20-695:715) Flagellar biosynthesis protein FlhA n=8 Tax=Sphingomonadales RepID=A5V5S8_SPHWW  E=0 s/c=1.05 id=46% cov=96%
------------------------PLATLMLVGLMVIPVPSFVLDMGFIANIMISLAVLMVALNAAKPLDFSSFPTVLLFATLLRLSLNVASTRVVLVDGHTGPAAAGHVIESFGNFLIGGDYAVGLFVFGILMVINLVVITKGAGRVSEVSARFTLDAMPGKQMAIDADLNAGLLTPEEAKARRQEVATEADFYGSMDGASKFVKGDAVAGVLILVINIFGGLILGTLSHGLSLSEAASTYIILAIGDALVAQVPALLLSIAAAAIVTRVSSPLDLSGQITSQ-FGSARAWAPVAAILGLLGIVPGMPHMIILSAAAVAGFVAWKLSKIKKAEQAIEVAAAEAANAPAPVSPnsidWNEISDGSALGLELGYGLVGLVDERKGAPLMARITGIRRQLSREMGFVIPLVRVRDNLSLPPNAYRITVAGVIMGEDECFPEQLLALDSGDLEGRVEGRECRDPSFGLEAVWISPDRRGDAIVAGYTVVDPATVVATHLNQVIAATAADLFGMDEAQRLLDALKEAAPQLVAGLTPQPLSLAQIASACRALLAEGVPLKDFRRIAEAMVDAAGQSADGLALVENIRSRIGALIVQTLVPVKMPLPVVTLDAGLESLLAQAVRTSPGashpFEPALANRIVAAISEAAMPLVNSATRFAIVTSPIARRALARLLKPHLPETPVMSFLEIPDGKAVEVAAVVGG-
>UniRef50_B5YIY8(9-680:683) Flagellar biosynthesis protein FlhA n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIY8_THEYD  E=0 s/c=1.04 id=47% cov=96%
---------------------VLVAVGIILILIFMIVPIPPFMLDLSLTMSITLSILIILVASYVRKPLDFSVFPSVLLIATLMRLSLNIASTRLILTRGELGTEAAGKVIKAFGEFVVSGNFVVGLIVFLILVIINFIVITKGAGRIAEVSARFTLDAMPGKQMSIDADLNAGLIDEKEARRRREEISREADFYGAMDGASKFIRGDAIAAIIIMIINIIGGILIGVLQKGMPIGDAVQTYVILTIGDGLAAQVPALITSTAAGIVVSRAATESNLGQDILQQLFKNPKTLATASGVLLLLGLIPGLPHLPFIIIAVVSGAIAYLMISKEKKEKEALPPPPVEEKPVSMEAQLESLLRVDPISLEIGYNLIPLVEGE--SSLVERIRSLRKQIAMEMGYIVPSIHIKDNLMLKPSQYSILIKGVEIATSEIILGRFLAIGARPGQD-IDGIPTKDPAFGVDALWIEEKDVSKAQMLGFTVVDASSVIVTHLREVLKNYGYELLGKQETQRLLDNLAKTHPRVVDDLIPNLLTLSQVQKVLQNLLRERVSIKDLQTILETLSEYANVTKDPDILTEHVRQALSRRITKSVQNPDGSISAILFEPSLERTFIESLQTTPqginfATDPLLMEKTIENVKKMADEATVKGYQPVLICSQSIRRFIKRAIERIAPSLPVLSPQEIAPGVKILMFGTV---
>UniRef50_P35654(1-695:715) Harpin secretion protein hrpI n=54 Tax=Gammaproteobacteria RepID=HRPI_ERWAM  E=0 s/c=0.98 id=36% cov=95%
-------------------EVVGAAI-VMSIVFMMIIPLPTGLIDVLIALNICISSLLIVLAMYLPKPLAFSTFPSVLLLTTMFRLALSISTTRQILLQ-----QDAGHIVEAFGNFVVGGNLAVGLVIFLILTVVNFLVITKGSERVAEVAARFTLDAMPGKQMSIDSDLRAGLIEAHQARQRRENLAKESQLFGAMDGAMKFVKGDAIAGLVIVFINMIGGFAIGVLQNGMEAGAAMHIYSVLTIGDGLIAQIPALLISLTAGMIITRVSADGqqvdaNIGREIAEQLTSQPKAWIMSAAGMLGFALLPGMPTAVFVIISAIALGSGLFqLWRIKQQDSQQQADELHAQQLAPEDNGYQDLRRFNPTRAYLLQFSQEHLNSEAAESLIQHIRRLRNRLVYHFGFTLPSFDIEFSPALAADEFRFCVYEIPLVTATFAVEQLavrtssieIHLADGESDGQIqPGQAERDEH---HWCWLPPQH-PLLQQEDRRCWNAQQLIMLRMEQAIHQSGAQFIGLQESKSILNWLESEQPELAQEL-QRIMPLSRFAAVLQRLASERIPLRSVRTIAETLIEHGQHERDSAALTDFVRIALKEHICHQYQQPNG-LNVWLLTPETEELLRDSLRQAQsetffSLAQEYGINLLNQMRSAFPPYD--NHHALILVAQDLRSPLRALLKDEFHAVPVLSFAELTSNVAINVLG-----
>UniRef50_B4UG32(17-684:692) Flagellar biosynthesis protein FlhA n=3 Tax=Anaeromyxobacter RepID=B4UG32_ANASK  E=0 s/c=1.01 id=44% cov=96%
---------------------LAVAIGVLGILAILIVPLPPAALDVFLALSIGLSVLMLLVALGLTRAVEFSVFPSLLLLVTLFRLALNVATTRLILTDGGKGAGAAGHLIETFGRFAVGGSLVVGLVVFLILLIVNFTVITKGSNRVSEVAARFTLDALPGKQMAIDADLAAGLVDDREARGRRQALERETEFFGAMDGASKFVRGDAVAGLAITGVNIVGGLLAGLLRDHLSLSTAAETYTLLTVGDGLVSQMPALLVSTAAGLVVTRAAG-SDLGTQVASQMLGRPVVLRTTAGVLVALGLLPGMPLVAFGGVAGALLLAARRAAGRQEAAARAPRPAAEEKGPERIQDLLALDALE----LGVGYGLVPLIDLDKGGELPGRVTALRRQLATDLGIVLPPVHLRDDLRLDPGQYRVLLRGVELGRGLAHPERLMALDPNGGDPAVEGVPGVDPAFGLRAVWITPADRPRAEALGLTLVDAASVITTHLSELLRRNAHEIVGRQEVQELLGVLGRDAPKLVEDVVPGAISLGELVRVVRGLLREGVSVRDLRTVLEAVADAAPRSKEPAWLVEAARRRLSRQLTARAAGADGVVRALTLDRSTEETLRATLGASdgeAALAPDVetARRLVASLESGATRLTGAGQPVVLLAPPDLRRPLFDFASRFVPDVQVLAARELAPGTTVEPAGTV---
>UniRef50_O85633(10-670:675) EscV protein n=33 Tax=Enterobacteriaceae RepID=O85633_ECOLX   E=0 s/c=1.02 id=33% cov=94%
--------------KAESYHDLILALFFFMAVMMMIIPLPTVVVDIIIAINISTALLLLMLSIYIKNPLELTSFPTILLITTLMRLSLSVSTTRLILLHHD-----AGDIIYSFGNFVVGGNIVVGLVIFTIITIVQFMVITKGAERVAEVSARFSLDGMPGKQMSIDGDMRAGVIDPLEAKVLRSRVQKESQFYGSMDGAMKFVKGDAIAGIIIVLVNLFGGVLIGMWQFDMPFSAALSLFSVLSVGDALVAQIPALIISVTAGVVVTRVPGesekEENLAGDIVQQVSVNSRPFLISAALMLVMAIIPGFPALVFLFLAVCLLGIAWKLQKKRTFGTGNNKDAMGADLSNSQNISPGAEPL-----------ILNLSSNIYSSDITQQIEVMRWNFFEESGIPLPKIIVNPVKN-NDSAIEFLLYQESIYKDTLIDDTVY-FEAGHAEISFEFVQEK-LSTNSIVYKTNKTNQQLAHLTGMDVYATTNDKITFlLKKLVLSNAKEFIGVQETRYLMDIMERKYNELVKEL-QRQLGLSKIVDILQRLVEENVSIRDLRTIFETLIFWSTKEKDVVILCEYVRIALRRHILGRYSVSGTLLNVWLIGSDIENELRESIRQTSsgsylNISPERTEQIIGFLKNIMNPTGNG----VILTALDIRRYVKKMIEGSFPSVPVLSFQEVGNNIELKVLGTV---
>UniRef50_A5P6J9(11-681:700) Flagellar biosynthesis protein FlhA n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P6J9_9SPHN  E=0 s/c=1.00 id=42% cov=96%
---------------------LALPFGILTIILLMVMPIPAILLDVFLVMNIALSVSVLMAAMNAQKPLDFSSFPSVLLFATLLRLALNVASTRIVLLNGHEGGASAGKVIEAFGAFLIGGNFAVGIFVFLILMIINLMVVTKGAGRVSEVSARFTLDALPGKQMAIDADLAAGLLTADEAKARRREIATEADFYGSMDGASKFVKGDAVAALLILLINVIAGLVLGISTHGLTAGEAAETYVTLAVGDALVASVPALLLSIAAAVIVTRVSDARDLTGQIGGQL-ADPKIWLPVACILFVIGCIPAMPQSIILPLSSGTFYLWFRLRKNHEARKEMPEPEAKPDPSHI---TIEEVTDQTLVTVQLGYGLISLTDDKRGARLVSRLTGLRKQMCQTFGFIVPQFRIEDSFELDPDAYRITLGGATLGGGKINPGHLLAIDTGEVIGSqtVPGIPTVDPSFGCPALWIEQGARDLAIAEGYLTVDPESVIATQVHQLLGARAQDLLGPDQVRDLIEHLRTRHAQLIDSITPQPLSLAALTRLLRSLLADGISLRHALRVFSSISLAAQQTAEHGRLIDIVRADLGGMIVAEVCPPDAKLPVITLAARLEEMVTGGLQDPSSgeiiIEPDLARSIGERIAAIIGQRDPAATRPALIVQPRARRALSALLRLRAPQCLVLSINELPVAQPIEVIAVVG--
>UniRef50_P35656(30-686:690) Hypersensitivity response secretion protein hrcV n=91 Tax=Bacteria RepID=HRCV_RALSO  E=0 s/c=0.98 id=35% cov=93%
-------------------------------------PLPTMLIDALLGLNITLSVVLLMVTMYIPSATSLSAFPSLLLFTTLLRLSLNIASTKSILLH-----ADAGHIIESFGKLVVGGNLVVGLVVFLIITTVQFIVIAKGSERVAEVGARFTLDAMPGKQMSIDADLRAGHLSPEEARKRRALLAMESQLHGGMDGAMKFVKGDAIAGLVITLVNILAGIVIGITYHNMTAGEAANRFAVLSIGDAMVSQIPSLLISVAAGVMITRVSDEEqahkqsSLGMEIVRQLSTSARAMFTASALLMGFALVPGFPSFLFVALATLIFVFGYTLRNRAKegdgdEGDALPALLREGSKGKAPTIAEQAPSFTVPVGVRLGAELAKGLDV---PALDTAFQQGRHALAEALGLPFPGIAIWKADALQPDSYEVRVHDIPGEPVAVPDGHLLIPDLPEALRAQAVEAAGLPNHPAP-HWIAPAHVAQDAALSATGQRVERVIADHVVHVLRRSAHLFVGLQETQWMLERVTTDYPGLVAEA-QKAVPAQRIADVLRRLLEEQVPIRNMRAILESLVVWGPKEKDTLMLVEYVRGDLGRQIAHQATGGTRQMPAILLDLSVEQTVRQAIKPTPAgnfltLDPQQVEAIIMRLRGIMQgNPVETPSALAIVTSMDIRRYVRRMIEPHLQALNVYSFQELGGYVDLRPVG-----
>UniRef50_Q057S2(7-697:699) Type III protein export, membrane component n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=Q057S2_BUCCC  E=1e-178 s/c=0.91 id=45% cov=96%
------------------------PFLILSILCLLILPLPTFVLDLFFTFNIIFSIIILIVSIFVVKILDFSSFPTILLFSTLFRLSLNISSTRIILLNGHTGSCSAGHVIESFGFFLIRGNFFIGIIIFIMLVIINFSVISNGSSRIAEVGARFILDAMPGKQMAIDADLNSGLISEKQAKKRRLEIHKEAEFYGSMDGASKFIRGDAIAGIIIMIVNVIGGLLIGIVQYKMSLLKAIKIYSILTIGDGLVSQIPSLIISIASGIILTRSNSDKiNIGEKIIYQVFNNSKVIFFSSIIFCFFGLIPGMPNFIFLFFSVLFFILSWYINYR-KNINKNFSKILKFKKRKKIDISWNDIEFEDLLRIELSSIFFKLCYQKEYNNLIKKLQFLRKNIAQDYGFLLPEINIIHNSKLDRGQYKIFIKGVELFSGFIFFDKLLIINKERDLINISGIKITDSFFSFPVFWINPVIKDTLLNKKIVFLDSNVLIIKNFNKIIRNNLYNLFGFQETQQLLDRISQHYPKLIDYLIPNLMSIITFQNILQNLLKDDISIKDIRTIVETLIKYSSQFKnNIEELTNIIRIALKEFITQKFFFKNKYINVIGLSTNFENILLKFVGNNkNQIEPIFSEKLIEKTKSAIILQKKNNLPVVLLVNPKIRVLLSNFFLNCNIILPVLSFSEISENRVIKITQFI---
>UniRef50_A3P6H9(1-701:705) Type III secretion protein, HrcV family n=18 Tax=pseudomallei group RepID=A3P6H9_BURP0  E=1e-177 s/c=0.89 id=34% cov=95%
---------------------IGIVALVIAIISLMILPLPPVAIDLLLGINITISVTLLMVTMYVPDIAALSAFPSLLLFTTLFRLSLNIASTKSILLH-----AEAGNIIESFGQLVVGGNLVVGLVVFAIITTVQFIVIAKGSERVAEVGARFTLDALPGKQMSIDADLRSGLLSTEEARKKRATLAVESQLHGGMDGAMKFVKGDAIAGLIITMINIVAGIAVGVAYHGMSAGDAANRFSVLSVGDAMVSQIPSLLLSVAAGVMITRVTDErapkrRSLGDEISHQLGSSARALYFAAFLLLGFAAVPGFPAALFVLLAAALAFAGYRLSRKGSpssgaARGQEQEALRAMQRSGAKADVPPILPRAPQFACAVGVRIAPdLASGLALPRLDEALDLERARLQDELGLPFPGVTMWIHPTLAAATFEVLIHDVPHLSVTLPARKAMlpqqrhlspahaALTDEQKARHRDLIERSEagppiDASGQATHWID----EPAVTAKDSVWRAEQIIAYASVAAIRTHAPLFVGIQEVQWILDQLGADSPGLVAEVL-KILPSTRIADVLRRLLEEQISIRNVRTIMESLVAWGAKEKDMLMLTEYVRGDLSRFLAHRAAQGERVLSAVLFDLQAEQHIRQAIKQTPtgnflALPPDDASRLVDRIQSLVG--ANARTDIALVTSMDIRRYVRRMIERRIDWLAVYSYQELGEHVELRPVGRV---
>UniRef50_B2TCZ3(17-688:691) Type III secretion FHIPEP protein n=2 Tax=Burkholderia RepID=B2TCZ3_BURPP  E=1e-161 s/c=0.85 id=35% cov=95%
---------------------LAVGAGMLSVLVLLILPVPSFVLDLFICVSFTASFVMLAATIYAAKPVELSSFPSLLLVTTLLRLALAIASTKMILLYAH-----AGQIIGAFGEIVVGGNVAVGMVVFIVLSAIQFIVVAKGADRVAEVSARFTLDGIPGRQMSIDADLRGGLIGASEAGRLRGELERETYFYGSLDGAMKFVKGDAIAGLVVALVNIAGGLAVGIAQRGMSLAEALHTYTILTVGDGLVSQIPSLIVSISAGLLVTRVSSggvGGNLGGDIFKQLSAHPPAMVMAGTACLALACIPGFPHIQFVLAAVVLIGLAVALMRQRAAADRAARPKMPAmtrDGGNYVQRILDDVELGTSSPLRVRLG-SAACNALNAAELNDQLAQLRRDLIVRLGVPFPGLVLLRDPRLDVDRYIVDIDDVPFSGGTLLAGHVLV-SGDTERVTMEGPPGYHPR-AEKSVWVRADSAAGIDDTQLMKSSANGLLCDHLMDVCEKCAPSFVGTQETRFLLNLVGAEFRELVT-VAQKVVTTAQIAAVLRSLLEQRVSIRNMRAILEAIVQVPDSERSHDRMVRDARIALAPQLVRSYADLSSWeVHAAVLEPSWEAELEAQIDLGPDGEPRCV--LDADRLESLQRGFAARNDVVrlVVTTAVLRPHLERVLRTLGMRTDVLAMEEIPlDEYRVRVIATL---
>UniRef50_A6G3X4(37-586:602) Flagellar biosynthesis protein FlhA n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G3X4_9DELT  E=1e-87 s/c=0.59 id=32% cov=77%
-----------------------------------------------------CAVVVLVATLQIRRVLDFAAFPVLLLVLTFARLTLNVSTTRLILSQ-----ADAGRVIDAFAGLVVRGDLLVGAVMFGVITAIQYLVIARGAERVAEVAARFTLDSLPGEQVAIDRERARGQIGADEARARRAELGERADFFGRMDGVMRIVKGDALVGLVITAINLVGGAAIGMRQ-GAGLVESLGVYGRLAVGDGLLAQLPAMLLALAAAMLVSRVDRRDAArSPRLFDWLEA--PMLLAPATLLLVLAAVPGMPTLAFGTTGVGLLLVALYLTRAPAAAKKLASP--------------------EPLRVGVPASLRPELREDLEGAL----PALRQRCSATLNLPFPPLVLELRPELPERSLALDLEDRSLAR-----------------ETIEASAADDPD-----AWL---------LAGF--------------HALTRGASALLELDAIEGAIERERRRRPAVVRRAMRCAESIDLLH-IARAFVRERVPLPSVTALLTALAEercfHDPNERS--RWPELAREALADRWLRELhagvceLGDPRWLRA---SPDLEDLLVARWEPGANrprvhLSPKERQRVLARVQGE--------GPAIVLCSARARPALAALMTGLRPHVPVFALGELA--------------
>UniRef50_Q1CE51(18-337:348) Secretion system apparatus protein n=2 Tax=Yersinia pestis RepID=Q1CE51_YERPN  E=3e-66 s/c=0.80 id=25% cov=43%
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDGLRWRWFEHLGVPLPEVEIRCDPTLAENTLSVQVYQERVLEVVLPPDSLLLTRPCSSLV------TNNQVLGAKMgsfDWLDAKQAMQARTLGIPYVEGHQRIITCLTRVFERYTAEFIGVQETRYLMDAMEGRYGELVKEL-QRQIPVGKVAEILQRLVEENISIRDLRTIFGALVVWAPKEKDIVMLTEYVRIALRRHLCRRFSHNKTWISVLRLGDGVEHLIRDSIRQTsSGTYSALEERQSLLILNKIKNAFAENQDAVLLTTLDVRRFVRKIIERDLFVLPVLSWQELGDEMNLKVAGTI---
>UniRef50_P57335(1-694:696) Flagellar biosynthesis protein flhA n=478 Tax=cellular organisms RepID=FLHA_BUCAI  E=0 s/c=1.15 id=63% cov=100%
MINFSSLLRIVKSLKTTQWQILAGPILILMILSMMVLPLAPFVLDVFFTFNIALSIIILLVSMFTRHTLEFTAFPTILLFSTLLRLALNVASTRVIFLRGHTGTNSAGRVIESFGHFLVGGNFAIGIVVFIILVIINFIVITKGASRIAEVGARFILDAMPGKQMAIDADLNAGLIGEEKAKKRRIKITQEADFYGSMDGASKFVRGDAIAGILIMVINIFGGLIIGLIQHHMFLNKAVEVYTLLTIGDGLVAQIPALVISTAAGVIVTRVSSNQNVGEQMASQLFYNPQVILLSAIVLGVLGLVPGMPNIIFLVFTVLLFILSWWLYEKKYDLENDFIKSNKKYKfihDAISEASWNDVELEDPIRIEIGYKLTPMTDINKKGDLLDRIRIVRKKVAQEIGFLPPLVRIKNNMHLSGNSYRIFIKGVEVGQGKCFYGRFMAIHSGRETESLPFEKVYEPTFGLSGYWIDEEFKNKAQKKGYSVIESSVVLSTHLNFLITNHIDDLFGRQEAQQLLERVTIDHPKLTEDLIPNTINLTIFHKILRNLLLEHVPIRDMRTILETLSEHADTQKDPNELTSIVRIALRKIIIQKLFNQNNIIEIIGLEPNLERLLLNSLKsGTDTIEPNLSENLLIQTKEAIKKQLLIGSPLVLLVRHSLRYFLSKFLRQNFPELTVLSQFEIIDVKEIKMTNIIG--
>UniRef50_Q0EZ54(11-688:694) Probable flagellar biosynthesis protein (FlhA) n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZ54_9PROT  E=0 s/c=1.08 id=45% cov=96%
------------------------AISVLAVLLVMMVPLPTWLMDVMLAANITVGVLILLTALYVLKPLEFSVFPSLLLLTTLFRLSLNVATTRLILLNGQDGPAAAGHVIEGFGQFVVGGNTLVGVIIFIILVLINFVVISKGSTRIAEVAARFTLDAMPGKQMAIDADMNAGLINEAEARVRRENVAREAEFYGAMDGASKFVRGDAVAGLIITVINLVGGLIIGVMQHGMSVTDAMSVFSLLTVGDGLVSQIPALVISTAAGIIITRASSNKSLPIELKAQFTAHPKVHWVAAGALFLMSLVPGLPFIPFLILSLGLGASGYYLQLGQQQKGLETIAEDVTPlAEPMGEEELDDLLVEDPIRLEIGYGLIDMVEGGREGNLLDRMKKVRRQITQEIGFVLPPVHIKDNLQLGVSDYQILIRGAIVGKGEIRPRNLLALESQISGPPVEGIATQEPAFGLPAVWISEDKRQQAELSGYTVVEPTTVIITHLTELLRGQAAEMLDRTQVHDLLEKFAQRHPKVVEEIVPSQVPVGLLQNVLQRLLVEWVPIRDLMLILEALSDHAGEHLSIDDLVEKVRTRLGRTITQRYLNAQGELAVFMLDGELEQRMSErmSQQQGWALPLDMPewQRFISRVNEISSHFDVD--IPVLLTTPQLRGHLTRALRKVMTRIAVLSIAEIPPQTNIQSLAKV---
>UniRef50_D2QZ28(3-684:690) Flagellar biosynthesis protein FlhA n=3 Tax=Planctomycetaceae RepID=D2QZ28_9PLAN  E=0 s/c=1.07 id=41% cov=98%
--------------RLSQLRDLVLPVGIIASVLVILVPMPSELIDLLLAINITVSVIVLLTTIYVRTPLEFNIFPTMLLATTLGRLVLNVASTRLILTHARtEGMDAAGGVIRAFGEFVAGDQIVVGIIVFVIIVVIQFVVITKGATRISEVAARFALDGMPGKQMAIDADLNAGIIDDKEAQRRREEVAQQADFFGAMDGASKFVRGDAIAGIIITLVNVLGGFVIGVVQYRMDIAESAEVFTKLSIGDGLVSQVPAFLTSLAAGLLTTRSSQKQNLPMVFLQQLFSNPQTLIVAGGFVAVL-VLTNLPKIPLLAIGAGCGGLALMLSRKQKSEEAKAVTDAKAAEAAtkPAEERIEDFLSVDPMEIEIGAGLIRLANPKQGGDLLPRITAVRQGVANDIGIILPKVRVKDFTRLGEYQYRIKISGNVVATGEVLPGKFLAIDSGATTGKVPGIETRDPAFNQPAVWIDSGLRERAQMMGYTTVEPTAVLATHLQEVVRRHADELLTRDATKHLLDELKKTSPAVVDELVPAPMKISDVQQVLQMLLREEVSIRNLSTILETLGDWATKTKDPVFLTEYVRNRLSRTISSRYRDAENRMHVLTLDPALEDRIAAGVEHSErglfvRLQPAVVERVCERISGELTKLTRGGKRPLVLVSPQIRAGLKLMTSGNLPRLHVLSFNEVTRDTKVDILGVV---
>UniRef50_A1JU76(16-702:704) Low calcium response locus protein D n=74 Tax=Proteobacteria RepID=LCRD_YERE8  E=0 s/c=1.06 id=34% cov=95%
------------------------AVLLLAVVFMMVLPLPPLVLDILIAVNMTISVVLLMIAIYINSPLQFSAFPAVLLVTTLFRLALSVSTTRMILLQ-----ADAGQIVYTFGNFVVGGNLIVGIVIFLIITIVQFLVITKGSERVAEVSARFSLDAMPGKQMSIDGDMRAGVIDVNEARERRATIEKESQMFGSMDGAMKFVKGDAIAGLIIIFVNILGGVTIGVTQKGLAAAEALQLYSILTVGDGMVSQVPALLIAITAGIIVTRVSSEDssDLGSDIGKQVVAQPKAMLIGGVLLLLFGLIPGFPTVTFLILALLVGCGGYMLSRKQSRNDEANQDLQslltsgsgaPAARTKAKTSGANKGRLGEQEAFAMTVPLLIDVDSSQQEALEaialnDELVRVRRALYLDLGVPFPGIHLRFNEGMGEGEYLISLQEVPVARGELKAGYLLVRESVSQLEllGIPYEKGEHLLPDQETFWVSVEYEERLEKSQLEFFSHSQVLTWHLSHVLREYAEDFIGIQETRYLLEQMEGGYGELIKE-VQRIVPLQRMTEILQRLVGEDISIRNMRSILEAMVEWGQKEKDVVQLTEYIRSSLKRYICYKYANGNNILPAYLFDQEVEEKIRSAVRQTSagsylALDPAVTESLLEQVRKTIGDLSQIQSKPVLIVSMDIRRYVRKLIESEYYGLPVLSYQELTQQINIQPLGRV---
>UniRef50_C2KYZ6(29-706:718) Flagellar biosynthesis protein FlhA n=1 Tax=Oribacterium sinus F0268 RepID=C2KYZ6_9FIRM  E=0 s/c=1.06 id=37% cov=93%
------------------------------------------MVDVAIVVNMAISMMILVITMTIREPLELSIFPSLLLITTLFRLGINVSTTRNILTNG----GSSGAIIKAFGDFVVRGNVVVGLIIYLIIVLMQFIVITKGAERVSEVAARFKLDAMPGKQMAIDADLSSGMITEQQARERREKIQRESDFYGSMDGATKIVKGDGVMSLITTAINLVGGSIIGIVQSGQPVATVLSTYSIATVGDGLVGQIPSLLISVSTGMIVTRAVSEGSLNEDVSKQFTQQPRSMMITGIAMGVLMLIPGMPILQILPVAGGFIAAGYFLEKRIKEEPErartegegllpsmeappQPQEAQGEAASAPAESEEDyfkdvnnvyNLLQVEPIEMDFGYSLIPLADESVGGRLIQRIVIFRRQYAQDIGFVVPsSIRLRDSSSLGTNEYSIKIKGEEIAKGEILTDYVLALEPDDVEDAIDGIETIEPAYGIPSKWIRPENRERAELYGYTVIDPLSVMLSHLSETIKRHAYELMTRQEVVRLVENLKKTAPELCEEAFPGVISYNLLQKVLTTLLREGVSIKDLETIVETMFECISETglpvKDTDQIVEKVRASLKRTITRMYC-EDGNMKVITLDAGLERTMVNSLARGEnglylALSPELLQSLIRQVAEESRKFNNLSSPPLILTSQVMRIHFYHLIEQFYPNVRVLSFNEVASNVQIQAIGSL---
>UniRef50_C9R9X8(54-679:684) Flagellar biosynthesis protein FlhA n=1 Tax=Ammonifex degensii KC4 RepID=C9R9X8_AMMDK  E=0 s/c=1.14 id=44% cov=91%
--------------------------------------------------------VILLVTLFTVEPLQFSVFPTVLLVLTLFRLALEVAATRLIL-----GQASAGAVIHAFGSFVVGGSYVVGFVIFLIITVVQFVVITNGANRVAEVAARFCLDSLPGKQMAIDGDFNAGLITEAEARERRRRLQREADFFGAMDGAAKFVRGDAIASLVIILINILGGFVVGMVLKGMDLTTALRTYTLLTIGEGLVTQIPALLVSTSAGVLVTRSGAEAAFGREFPRQLAAFPRILFVAAAIFILLGLVPGLPHLLLLSIGGATGALGYFLEEERKKQIKAAAPPAPPKEKRTEPENVLTYFQVEPLEIELGYGLVPLAQEEQGGDLLARVAAVRRQCAAELGIYVRPIRIRDNLQLPPNVYLFRLRGIEAARGELMPGYYLAVSP-MGEAKLEGIATKEPVFGLPAWWISPADKEKAEAAGFTVVEPSAVLATHLSEFIKQNAPLLLGRQETRELLDAIKEKYPALVEELVPGLLGLGEVQKVLQGLLEERVPIKDLVSILEALADAARVSRDPDFLLEQARAALSRVITQQYA-RDNKLSVLTLHPRWEERLSQAKEEGKVLEPREVQRLLEKVGQAVEGALRRGIAPVILCAPGARLLLRRLIAAKFPQVAVISYREVWPQVTVEAVGTV---
>UniRef50_Q5HUS5(23-720:724) Flagellar biosynthesis protein FlhA n=22 Tax=Campylobacterales RepID=Q5HUS5_CAMJR  E=0 s/c=1.00 id=41% cov=95%
--------------------------FLVCILAIIIVPLPSPILDFFLALSIALSVLIILISIYIPKPTDLTTFPTLILIITLFRLSLNIATTRMILSEGQNGPEAVSEIIAAFGEFVVGGNMVIGVIVFCILVLINFMVVTKGSTRVSEVQARFTLDAMPGKQMAIDADLNAGLIDEQTARARRQEVIAEANFYGAMDGSSKFIKGDAVAGIIITIINIIGGFLIGSFQHDMALSDAASTYTILTIGDGLVSQIPGLITSTATAIIITRASkDEENFAEGTLTQLLSEYRTLLIVGFVLFIFALVPGLPTLSLGFMALVFLSLGYLTKQvkegkidittvKKSKPSAAVASQSGAGGTTAAPAkkseeeilkeeehKINDILKVEILELELGYGLIKLAE----NELTERIRSMRRSIAESLGFLMPKIRIRDNLRLKPNEYSFKLKGVSIASAEIYPDKYLAMDSGFITEEIEGIATKEPAFNSDALWIDANLKDEATLNGYIVIDPASVISTHMSELIKAHASELLTRQEVQNLLDKVKNDYPIIVEGAL-GVAPVSLIQKILKDLLKHHIPIKDMLTILESVSDIAEVSKSFDMIIEHVRASLARMITNMYLDDKGNLDIFILDSASSAVLMENVQFRDGsyhlpLSVAQTGTLVDTLRAEVAAVANGRIKPFILCvEPQLRKFIADICYNFSINIVVLSFAEIAENTNFNTEGII---
>UniRef50_A3PKA8(11-694:704) Flagellar biosynthesis protein FlhA n=9 Tax=Bacteria RepID=A3PKA8_RHOS1  E=0 s/c=0.97 id=46% cov=96%
------------------------PLGILAVVAMMVLPLPVALLDLFFVGNILLSLVILMVALHTFRPLDFSSFPSILLVATVLRLALNVASTRIVLSNGHTGHDAAGKVIEAFGSFVIGGNFVVGAFVFAILVIINLVVITKGAGRVSEVSARFTLDAMPGKQMAIDADLNAGLLNPDEARERRADVAAEADFYGAMDGASKFVKGDAMAGILILIINIVGGIIIGTLQHGLGVMQAAETYVLLSIGDGLVAQIPSLLLSIATAIIVTRVSSTTDMSVLIGKQM-GIGRAWVPVAAVMLILGLTPGMPNLLFLLGGVAAAAMAWVAFAREgagakgtAAAGGAQPAVEAGAAPGPEAITTEDVTDYAPISLQIGYGLIPLA-GDNGGALVARITAIRRDVSKALGFVVPGVRIRDDLGLAPNQYRIRVGQAILAEDTVYPDRKLALPGGASRRKLNGIAVRDPSFGLEASWILPHQVAEAEADDHVVVEPESVIATHLSQILVKHAAQLIGQDDVQGLVDALGRTAPTLVQSVVPKLVPLHVLTAVLKALLADRIPVSDMRRILEGLSDLAGRSLQPVEMAEALRPALVPLLLQQMGPISQPLPLITLEPDLEQLLLRSRRQGDEMllvDNGLAQSLLTALSERLETASGQGKQAAVIVAQPLRRAFAAFVRPHLPDAVVIGMGELPEARRVEVLGTVGG-
>UniRef50_Q56338(29-693:707) Flagellar biosynthesis protein flhA n=5 Tax=Treponema RepID=FLHA_TREPA  E=0 s/c=0.99 id=37% cov=94%
-------------------------------------PLPTQILDALMAFNLIFNLLILLMVLFVEKPTDFSVFPSLLLTSTVFGLGLNVSSTRLILTLGDR---FSGYMIRAFSSFVVGGSgtqgLVIGFTVFIILIAVQAFVITKGATRIAEVAARFTLDFNATKSMSIDAEYNAGVITEEEARERKRQIQREADFFGAMDGASKFVSGNVKIGIFITIVNVIAGLIVGVIFRREGFQAALQTYTNLTIGDGLLAQLPSLLLSVATGFIVTRSSDQGSFGQNVQEQFSKSALVYFIGSGALIVMAVLPGFPHSILFFMAVCFAFVGLQLRKRERVHVQEHEMQKSSDKKGMQQtqdstSEMGPIVPLDPLSLELGYGLIPLVDKEKGAELLSRITVIRKDAALDLGLVAPKIRIIDNMRLDPSSYCFKIQGLEVARGKLRLGWFLAIKSGQVTEEVPGERTIDPTFGLPAVWISEENRDRAERVGYTVVAPSAIIATHLTQVIRTNAADILGRQNVQMIIDALRKEYPAVVDDVTQK-CPLGKIQKVLQGLLREQVSIRNTVAIFETLADFASTSDtvPVPILIEKVRQRLGRQICLQYADEQNVLHVMRLDSSLETFLSEKIALTVdslsilTLSLDEQRQVLQAVRTVFVPTRQEGYIPVLLTTDTIRSAMWNLFFSDRIEIAVMSYKEVSTDMRIETVGVV---
>UniRef50_D2UDE8(20-703:703) Probable xanthomonas secretion apparatus protein n=1 Tax=Xanthomonas albilineans RepID=D2UDE8_XANAL  E=0 s/c=0.96 id=36% cov=95%
--------------------------LIIMIIGMLVMPLPPGLLDFLIAVNMIGGVLVLMSALHVVNMLSLSTFPAIVLLTTLFRLALSISSCRLILMYGH-----AGQIIQTFGEFVIGQNIVVGLVIFSIVTIVQFIVITKGAERVAEVAARFSLDAMPGKQMSIDADFRAGVIDGDGVRARRSALERESQLYGSFDGAMKFIKGDAIAGILIIFINMIGGIVIGMIKNHLSFSESMSTYSILSVGDALVGQIPALLISMGAGFLVTRISgSEQNLGHDIVSELLSSSPVLLISSGLSALIGLLPGFPLPVFLTVSASLGFFCWSRWRAERSASAEgrhanaGRPALQALGAGTAQADADVQADTDTafLGHPLVVILPHACAHTPSLSPQNLATSLHARVFDEVGLLLPTIVvgfaaadaiVSDAQDDARQRVVIRINDVDAAVLYIAFDGVrLVGDSDLLLGLGMHVSRLIDCDGEPAEWVM-AQPAQLQDIGIAFRSALDELHDQFITVILRNCSEFFGIQETKNLLDMLDSRYPELLKEVY-RQIPVQKLCEILRRLLTERVAIRNMKLILETLANWGTREKDSIVLTEHVRIALGRYISHRIA-RNGHMKVIVLTPEFEEKVRQGIKHTStgtflNLTPTVANELVDRITVALNQLHAVRRDFVLLASMDVRRYARTLIESRFPGLQVISFGEVSDNVELDVIGNI---
>UniRef50_Q2NR60(15-665:665) Type III secretion apparatus InvA n=4 Tax=Enterobacteriaceae RepID=Q2NR60_SODGM  E=0 s/c=0.98 id=33% cov=92%
-------------------------VLVITIIFMIIIPLPAYLVDFLIGLNIVIAMLVFIGAFYIDRILSFSTFPAVLLITTLFRLALTISTSRLILTD-----ADAGEIIATFGQFVIGDNLVVGFVIFAIVTVVQFIVITKGSERVAEVAARFCLDGMPGKQMSIDADLRGGVIDAEGARQRRSVLERESQLYGAFDGAMKFIKGDAIASIIVAFVNFIGGIAVGMNQHHMDLSQALSTFTLLTIGDGLVGQIPALLISISAGLIVTRVNGDgDNLGRNIMQQLLGNPFVLLVTAVLALSIGMLPGFPLPVFVMLAMALGTL-LLMRQRQTRVVPLPAAADYA-------GGYPERIMPEALAVILQVSRANYARLEKE----QLCERLRGQFLIDFGVALPPLMLCPCEHTDDRTVVVVLNEIRADVFTLHFDML--------RRVIPGDRPCPPDVTLHqeqeAVWAALDDRERLLATGCVLRPAVDELYHCFAVMLTHHVNEFFGVQETKHLLDQMESHAPDLLKEVLRHA-TVQRIAELLQRLLMERISIRHLKLIMEAMALWAPREKDVSALVEHVRCALARYICHQFA-ADNLLRVIMLSSEVEETLRDSLHTTSAgtflnLGPQVSEELMELFTSALESLPIAQRDIVLLAAADIRRFIKSLIQHRFRDLEVLSFGELTESVTVNVIKTI---
>UniRef50_A1B5C1(16-693:694) Type III secretion FHIPEP protein n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1B5C1_PARDP  E=1e-180 s/c=0.94 id=37% cov=96%
--------------------------VLLLIVLSMVIPMSARLLDLGIALSIASATLILVMASLVEKPTDFQAFPVLLLVSLLIRLSLNISSTRLILTNGQNGANAAGHVIEAFAEFVAGGSLLVGLTVFAVITVVNFMVITKGSGRMAEVSARFALDSLPGKQLAIDGDLNSGAIDHDEAKRRRAREQREISFFGSLDGASKFVKGDAIAGLVITLINLFVGLAAGVILHGMPVAEAMSTYSRLTIGDGLVSQIPALITSMAAALLLSRGGATETTADLLSQQFLSNWQVPFICAVGMLFIGLVPGMPTLVFFGLAAVLGVAAWFIRARQDKTRPEDAAPVESHAAASAQTRIGDVLDTDEICVEIGAGLIlSALDPVRG--LGQRITNLRLHIARAYGMILPDVRITDGTGFQEGEYVVRLQGVVRGKGVLRPQGVLALGAEAMLDELDGENVREPVYGSAARWIAPEWQDEAAIAGATVVTPMEVLSTHLMEVVKTNLPALLTMSSMQRMIrelcsvsdEHRAQLNQRFFDSMVPDKVPPEMLLAVLRGLLEERISVRNLVLITDAVHE-ARGGASPEAVYEQVRKRLRGQITEQFLDEDGYLELLQLHPQWEAEIarseAESARAGNGAIPQIQKRLADALQATLSGLPP-GIEVVLAVPDHRRRLVRMMLSSAGIATPVLGLDEIDPGAQVRLRGTVG--
>UniRef50_C4PLR3(18-598:605) Flagellar biosynthesis protein (Export) n=10 Tax=Chlamydiaceae RepID=C4PLR3_CHLTZ  E=1e-122 s/c=0.76 id=29% cov=83%
---------VVNNFRGSSWKIVAIPSC---ILFTLIFHLPRWLIDFGVCTNLACSLSIIFWVFSLRSSASARIFPSLLLYLCLLRLGLNLASTRWILSSGW-----ASPLIFALGNFFSLGSIPVALTVCLLLFLVNFLVITKGAERIAEVRARFSLEALPGKQMSLDADIAAGRIGYSRASVKKSSLLEESDYFSAMEGVFRFVKGDAIMSWVLLGVNILAALFLGRATHVGDLW--------LTVlGDALVSQIPALLTSCAAATLIAKVGEKESLAQHLLDYYEQSRQSFLFIALILCGMACIPGAPKALILGFSV-LLFLGY-------KNPSSGETLLFQKER--VEFVLPDEGVGNPANL---------------------YKDARNQIYQELGVVFPeAIVVRHVTGSSP---RLIFSGQEVALRELSCPAIL-------------------------------------------------------ESIRQLAPETISERFVTRLVDEFREHAFLSIEEILPLKISENSLIFLLRALVRERVSLHLFPKILEAIDVYGSQSKNSQELVECVRKYLGKQIGLSLWNRQDVLEVITIDSLVEQFVRDSQEKVV---LDLNEKVVAQVKHLLR--VGEGNFRAIVTGSETRKELKRIVDPYFPDLLVLAHSELPEEIPITLLGAV---
>UniRef50_C9XJ39(2-681:691) Flagellar export protein n=7 Tax=Clostridium RepID=C9XJ39_CLODC   E=0 s/c=1.12 id=42% cov=96%
---------------------VIVAFGVVGIVLMMIVPLPTFILDILLAINISLSVLILLMTLFTTNVLDLSIFPTVLLVTTLFRLGLNLSSTRLILTQGY-----AGEVIEAFGSFVVGGNYVVGIIIFLIILIVQFVVITNGSGRVSEVTARFTLDAMPGKQMSIDADLNAGVIDDKTARKRRKELQQEADFYGSMDGANKFVKGDAIAGLIVTAINIIGGIVIGAVMLNMTLMGAAQTYVRLTIGDGLVSQIPALLISTSAGIIVTRASTDENFGGLVSKQLTAIPKAVMMTGCVLIVLGMMPGLPKPAFFSLGIGAIAAGYFLGREKKDTLEDlefEKPDMVNPDKNEVEDVTNLI-NVESIEVEIGYGLISLADESAGGDLLQRIASIRRQCAIDMGIVVQPIRIRDNLQLNPNQYNIKIKGNVVGGYEIMPNMVLCMDPMNQGFSIFGIKTIEPTFGIEALWIESDKVEDAEIKGYTVVDSSTILITHLLDIIKSNAHELLGRQEVKTIIDAARENYSAVVDELIPDLMTLGEIQKVLKNLLREKVNIKDRVTILETLADQSRNTKDIELLTEYVRIALARSICNNLVDDDKTIVVATLSPETEELVSNNLQRSvngtyPAVDPENTNKIFESIQEVMNNVYFNHNIPVIVVSPKIRAPFRKLVEIVYPNLTVLSLNEIPNDIKIKAEGVV---
>UniRef50_D0MGA3(13-690:696) Flagellar biosynthesis protein FlhA n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MGA3_RHOM4  E=0 s/c=1.11 id=48% cov=95%
---------------------------IVLILFVMLVPLPPFLLDVLLATNITISLAILLTAFYAARPLEFAIFPGLLLLTTLFRLSLNVASTRLILSEGK-----AGALISAFGQFVVAGNYVVGAIIFIVLVVINFVVITKGSGRIAEVAARFTLDALPGKQMAIDADLNAGLIDEDEARKRREEIAREADFYGAMDGASKFVRGDAIAGLVITAVNIIGGFLIGVFQHGMSAAEAAQNFVLLSIGDGLVSQIPALLISTAAGIIVSRASGEANLAEEFKGQLFGRSYPLLITGSFLALLGLVPGLPLVPFWLLAGTTLLLGYQRRQFERREQAKPAQPEAQEPEQKPSEDPGELLMVDPLELEIGYGLIPLVDPNQHGDLLDRIKVLRQQLALELGIVIPPVRIRDNMALGANRYVIKIRGNPVAEGEVLPGYYLALLPEGLEETPPGLRTTDPTFGLPALWVAERNLPDAERMGLTVVEAPAVITTHLLEVLRKNAHLLLDRQEVKKLLDKVKETHPALIEELTPNLLSIGAIQKVLKRLLRERIPIRDLVSILEALADHATSTKNIDVLTEYVRHALAPTITRQFLSPDGAIYAFVLDPILERHLLQQAEAGElhpgtlGLEPRQSERFLKEAERITRRLLSEGRPPVLLTSPVLRPVLYNFLAPSIPDLNVLSYNDLLPDTRVEVV------
>UniRef50_C2ED96(33-690:692) Flagellar biosynthesis protein FlhA n=5 Tax=Lactobacillales RepID=C2ED96_9LACO  E=0 s/c=1.14 id=39% cov=94%
-------------------------------------PLPTSLLDIFIVTNLTVAINILLITLFTKSVLEFSTFPTVLLITTMFKLGLNMSSTRSILTTGN-----GGHVIEAFADVVAGENYIVGIILFVIIMIVQLVVVTNGSGRVSEVSARFTLDAMPGKQMAIDSDLNSGAITEEQARQRRKDLQREADFYGSMDGASKFVKGDAIAGIIIVLVNLIGGTIIFTAKGDLSITDALSQFGKLAIGDGLVSSVPSLLISLATGVIVTRSEDNSTFGTDIASDALRNPQLFKVVGVILLVLALVPGFPKIPFIVLSLAMFAANVLVKQKEEQRikeriKEEQTLALQRKKEEQEEDDDVASFQVEPLSIEIGYGLIPLVDSTIDNSLMNRISAIRRQTAHELGILVSPVRIRDNLYLNANDYSIKIRGNEVGHGDIYPDKYMIISqSDDGSFPFQGIPTKEPAFQLDALWIDEKDKENADLQGFTVIEPLTVIATHLKEIIHAHAPELLGRQEVQKLLEGIKANNNVVIDELIPDIMRLGEVEKVLQNLLEENVPINDLSTILETLADYGTVTKDTEVLTEYVRQGLRRTIANKYADENDRINVVTIHPKVEEMVSQSIQKTATgsypvMKPDSVNKILTAIGDISQQMAAQNMNYVILTSPKIRLAFRKLIAFNFPDVAVLSLNEIPNEIAIESIGNI---
>UniRef50_A0LT74(29-700:708) Flagellar biosynthesis protein FlhA n=15 Tax=Bacteria RepID=A0LT74_ACIC1  E=0 s/c=1.09 id=44% cov=95%
---------------------LGIPAGVIAIIVMMVVPLPTALLDVLLATNITFALLVLLVSMFVKRPLDFAAFPSLLLIATLFRLALNISVTRLVLLHGY-----AGKVVQSFGHFVVGGSLVVGLVIFLIILIIQFVVITNGAGRVAEVGARFTLDAMPGKQMAIDADLNAGLIDEAEARRRRSEIAAEADFYGAMDGASKFVKGDAIAAVVITGVNLIGGLAIGILQRHLSIGEAVNTYSLLSVGDGLVSQIPALLLSVSTGLIVTRGASEADMGADVLRQIASQRQAIRIGGAAILVIALIPGLPKLPFLILGGAALALGMRLKEPPKPAEPQPAAEPAAPAPDSPEALVEEMR-VEPLELNLAFDLVDLVDQSRGGELLERVRALRRKLALELGMVIPMVRTRDNLDLPPGSYAIRVNGVEVARGEAPPGAMLAI--GENLTNLPGTATIEPVFGLPGKWLAPELRQQAEMLGATVVDRASVITTHLAEVVRDNAAKLLSREDVKTLTELTRRTHPVVVEELTPALLQLGDIQRVLQGLLDEHVPIRDLPRIFEALSQRARVSQDPEGLIEAARATLGPAISAAYA-QDGRLSVLTIDPLTEQRLVDKLRHGEhgsflALDPDDAEYLVGEVRRLAERAEQLGNTPVLACAAPLRPALRRLVRSANPRLPVLAYGELGPHLQLETVGTV---
>UniRef50_Q9ZM40(1-729:733) Flagellar biosynthesis protein flhA n=25 Tax=Epsilonproteobacteria RepID=FLHA_HELPJ  E=0 s/c=0.98 id=42% cov=99%
MANERSKLAFKKTFpvfkRFLQSKDLALVVFVIAILAIIIVPLPPFVLDFLLTISIALSVLIILIGLYIDKPTDFSAFPTLLLIVTLYRLALNVATTRMILTQGYKGPSAVSDIITAFGEFSVSGNYVIGAIIFSILVLVNLLVVTNGSTRVTEVRARFALDAMPGKQMAIDADLNSGLIDDKEAKKRRAALSQEADFYGAMDGASKFVKGDAIASIIITLINIIGGFLVGVFQRDMSLSFSASTFTILTIGDGLVGQIPALIIATATGIVATRTtqNEEEDFASKLITQLTNKSKTLVIVGANLLLFATIPGLPTFSLAFVGTLFLFIAWLISREGKDGlltklenylsqkfgldlsekphsskikphAPTTKTKTPEEIKREEEQAIDEVLKIEFLELALGYQLISLADMKQGGDLLERIRGIRKKIASDYGFLMPQIRIRDNLQLPPTHYEIKLKGIVIGEGMVMPDKFLAMNTGFVNREIEGIPTKEPAFGMDALWIDAKNKEEAIIQGYTIIDPSTVIATHTSELVKKYAEDFITKDEVKSLLERLAKDYPTIVEE--SKKIPTGAIRSVLQALLHEKIPIKDMLTILETITDIAPlVQNDVNILTEQVRARLSRVITNAFKSEDGRLKFLTFSTDSEQFLLNKLRENGTsksllLNVGELQKLIEGVSEEAMKVLQKGIAPVILiVEPNLRKALSNQMEQARIDVVVLSHAELDPNSNFEALGTI---
>UniRef50_C1A546(3-689:695) Flagellar biosynthesis protein FlhA n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A546_GEMAT  E=0 s/c=1.04 id=44% cov=98%
----SAALPIPANSAGAKKAEIAIALVVVLFIALIVVPLPPVLLDLCLAASIGLSLVVLLVSLQTTNPLDFSSFPALLLLLTLFRMGLSVSSTRLILSEAH-----AGKVIEAFGQFVIGGNYAVGIVIFLILTGINFIVITKGAGRIAEVAARFTLDAMPGKQMAIDADLSAGLIDEKEARTRRDEIARTADFYGAMDGASKYVKGDAILGILVVIVNIVGGIFIGVIQRGMEIGKAASTYTILTVGDGLVTQVPALIISTAAGLMVTAATNNDKMGAVLSKQLGNHPRAMWVAAGVLGSFALIPGLPMFPFLAMAAGAALLARTATKAETRRLELATisAPVEMEELPPPPDPMRDLLQIDPIELEVGYALIPLIDEGQGGDLLERISLLRKQAALELGILIPAIRIRDDIRLPANEYVIKLRGSEVARAEVLPRFLMALNTGSVVAEIDGMETVDPSFGMPARWVASARRTEAEALGYVVVEPTTVVATHLLETLKLSASELLGRQEVQEMVETLKKSHPALVEEIIPGKVSLSVLHRVLQRLLRERVPIRDLVTILEALGDGAESTRDPEALTEVARRALTNVIARLFADQTGTVRGITIGGRLESALvglfspRSSQPNAPMLTPESLAAMLRDLNHLATTYAVDGRPLPLITPPSLRVGVRRLIEPVLPSLPVISLAELPAQITLSSVTT----
>UniRef50_B5ZM53(60-730:731) Flagellar biosynthesis protein FlhA n=11 Tax=Alphaproteobacteria RepID=B5ZM53_GLUDA  E=0 s/c=1.05 id=41% cov=96%
---------------------VGLALGVVVLLAILIIPLPTFILDMGLSLSITSSVLVLMVALFLERTLDFTSFPTLLLLTTLLRLSLEIATTRLILSHGSEGTYAAGHVVAAFGGFLMGGDLFIGGIVFCILLVVNFMVITKGSGRIAEVAARFFLDSMPGKQMAIDADLSSGAINERTARAKRKELEDESAFYGAMDGAAKFVRGDAIAGLIITAINIVGGLAIGILRHDMPLSEAASTFTTLTVGDGLVSQIPALLVSTAAGIVVTKGGSDGSTDVTLVRQLGGNPKPLAVAGGLSALFAIMPGLPALPFLVIAVGAGIGAWM---RHKTPVKDGDGDVTQISPQPTAPPISEMLKLDLLRLELGFGLLPLTSGEN-PQLTEQIKALRRTVATELGFITPPVRIQDNILLPSDNYVIKLKEIEIGSGEVKPGKLMAMSPSGGAPDLPGDRTTEPAFGLPAVWIDPSLKPKAVAMKCTIVDPASVIVTHLSEAVRQNLPDLLTYVATQTLLDDLPREQQKLVNDLIPSQVPLSTIQRVLQSLLAERVSIRDLPTILESIQEGCSLGlRGVQALTGHVRVRLSRQICNALVGGAGYIPMITLSAEWEAEFMAHITGQAddrrlAMPPSMLNKFVGKLREVFNTVSASGEIPVVVVSTPVRDSMRSIVERVRPSVSVLSQSEIYPRSRIKTVATI---
>UniRef50_Q8YDK9(45-722:723) Flagellar biosynthesis protein flhA n=84 Tax=cellular organisms RepID=FLHA_BRUME  E=0 s/c=1.04 id=37% cov=96%
---------------------IGLAVGIIIILTVLFLPVPAVVLDIGLAFSIAFSVLILMVALWIQRPLDFSAFPTVLLIATMMRLSLNIATTRVILTHGNEGYLAAGHVIHGFSQFVMGGDFVIGLVVFAILIIVNFLVITKGATRIAEVGARFTLDAIPGKQMAIDADLSSGLIDEKEAQRRRRELEEESSFFGSMDGASKFVRGDAIAGLIITAVNIFGGIVIGATRHGMDISQAADVFTKLSVGDGLVTQIPALIVSLAAGLLVSKGGTRGSADQAIFGQLGAYPKALLIAALLLFILGVMPGLPAFPFFLLGGAMAFVGIavpRRQARQREADAAEAGKKQREAEEQERNSVKASLETNQIELCLGKQLSARLIASQE-ELAHRVNKMRRKFAQEYGFVIPEIKVTDDIALPPKSYRIKIHGTAVASHELRVGEILVVLGERPVPSVPGEEVREPAFGMRAYSVPETFTADLRREGYMTVDNLSVLLTHLSEIVRNNLAQLLSYKDMRILLDRLGPEYRKLLEDICPAHISYSGLQAVLKLLLAERISIRNLHLILEAIAEIAPLVRRPEMIVEHVRMRMAQQICGDLSD-NGVLNVLRLGNRWDLVFHQSLKRDAkgeivefDIDPRLLEQFGTEASAAIRKHFDNGERFVLVSSPEARPYIRMIIERLFATLPVLSHVEIARGVEVKSLGAI---
>UniRef50_C6NYG1(1-702:703) Flagellar biosynthesis protein FlhA n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NYG1_9GAMM  E=0 s/c=0.99 id=44% cov=99%
MRDATVTTKTDASVVKSKWsnlQTLLGPIVLVMILTMIVVPLPPILLDVLFTFNITFSLLILFAAFYTKKPLDFSAFPTVLLIATLLRLALNVAAARVILLDGYRGDQAAGVVIESFGRFVVGGSYVVGIVVFAILVIINFVVITKGSTRIAEVTARFSLDAMPGKQMAIDADLNAGMINQEQAKKRRELISAEADFYGSMDGASKFVRGDAIAAILIIIINLIGGLIVGVFQHGMSLSSAAHTYTLLSIGDGLVAQIPSLVISIAAGLLVSRGSDDAEMGHLVSRQLFyDNRYGLLVTAIILGITGIIPGMPHWAFLLYALLTGSIWYVLQRSKVREAEQVSATTAAEAPAVVEEPIDarVLKRVEPIGLAIGYQLIPLM--QKDGELQKRLNLLRRRISESAGFVLPAIHVTDDLTLRPGGYRIEIHGIGEAHGEVHADQLLAIPSGSDTPPISGSRTTDPVYGATAFWIARERADDAELLGYTVLDAATVVTTHLHEVLQKHLADIFGLKQTQELLDVVARRNEKLLDSVIPRIVTAPKLTKVLRDLVREQVSLRDITAILESLAEDGKENLPTEQLVEMIRSRLGRQIVTDLLlgrDRGAPLQAAVMSPEMDSVLqtaiqtAAAAGTAPTLEPSVLLHLTQAVRQAVTQMEGQSMRPVILVRDAIRYALSGWLRSAGIVVPVLGFAEVPGEIQVKSAVEI---
>UniRef50_Q03845(8-700:700) Flagellar biosynthesis protein flhA n=42 Tax=Alphaproteobacteria RepID=FLHA_CAUCR  E=0 s/c=1.00 id=41% cov=97%
---------------------MGLALGVVGIIVLLIIPVPAPLLDVLLAISLTGSVLILMTAILIKKPLEFTSFPTVLLVTTLFRLGLNIASTRLILSHGQEGTGGAGAVIEAFGHLMMQGNFVIGVIVFIILIVVNFMVVTKGSGRIAEVAARFTLDSMPGKQMAIDADLSTGLISQDEAKIRRKELEQESTFFGAMDGASKFVKGDAIAGLIITAINIIGGIIIGVVQHKMPFGDAASTYTIMTIGDGLVSQIPALIISIAAGMVVSKAGVEGSADKALTTQLAMNPVGLGMVSASSGIIALIPGMPIFPFAAMALAAGALAYkRVQDAKKPKALDPADLEAAAPSEPEEEPISASLAIDDVKIELGYGLLTLINDLDGRKLTDQIRALRKTLASEYGFVMPPVRILDNMRLANQGYAIRIKEMEAGAGEVRLGCLMCMDPRGGQVELPGEHVREPAFGLPATWIADDLREEATFRGYTVVDPATVLTTHLTEILKENMADLLSYAEVQKLLKELPETQKKLVDDLIPGTVTATTVQRVLQSLLRERVSIRDLPQILEGVGEAAPHTASVTQLVEQVRARLARQLCWANRGDDGALPIITLSADWEQAFAEALIGPGddkqlALPPSRLQDFIRGVRDSFERAALAGEAPVLLTSPGVRPYVRSIIERFRGQTVVMSQNEIHPRARLKTVGMV---
>UniRef50_Q254G8(22-706:709) Type III secretory flagellar biosynthesis n=19 Tax=Bacteria RepID=Q254G8_CHLFF  E=0 s/c=1.00 id=34% cov=96%
---------------------LILALWMIGVVLMIILPLPPTIVDLMITINLAVSVFLLMVALYIPSALQLSVFPSLLLITTMFRLGINISSSRQILLKAY-----AGHVIQAFGDFVVGGNYVVGFIIFLIITIIQFIVVTKGAERVAEVAARFRLDAMPGKQMAIDADLRAGMIDAQQARDKRGMIQKESELYGAMDGAMKFIKGDVIAGIVISLINIVGGLTIGVAMHGMDLAQAAHVYTLLSIGDGLVSQIPSLLISLTAGIVTTRVSSDknTNLGKEISSQLVKEPRALLLASAATLGVGFFKGFPLWSFSILSFIFGLLGVILLAKKNSTAKKGASGAsttvgaAADGAATAGDNPDDYSLTLPVILELGKDLSALIQHRTKSGqsfIDDMIPKMRQALYQDIGIRYPGIHVRtDSPSLEGFDYMILLNEVPYVRGKIPPHHVLTneVEENLKRYNLPFI-TYKNAAGLPSAWVSEDAKTILEKAAIKYWTPLEVIILHLSYFFHRSSQEFLGIQEVRSMIEFMERSFPDLVKEVT-RLIPLQKLTEIFKRLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLLDPEIEEMIRGAIKQTSagsylALDPDSVNLILKSMRNTITPTPPGGQPPVLLTAIDVRRYVRKLIETEFPDIAVISYQEILPEIRIQPLGRI---
>UniRef50_A8EW37(5-701:703) Flagellar biosynthesis protein FlhA n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EW37_ARCB4  E=0 s/c=0.96 id=39% cov=96%
---------------------LIAVALFLSMLAIIIVPLNQEALDFFISVSLAISFLILLISLYIQKPADLTTFPTLILILVVFRLALSIATTRSILGEGHNGPDAVSSIITAFGQFVVGGNMVIGIIIFIILVLINFMVVTKGATRVAEVTARFTLDSMPGKQMAIDADLNAGFIDDIQAQARRKALISEANFYGAMDGSSKFVKGDAIASIIITLVNLVGGILVGLFQHNLSIAQAGETYTILTIGDGLVSQIPALLLSTATAIIITRSNtDDEKFATQTVNQLIKDSKSLILVGIGLMLFALVPGFPTFILMTMGLLMGGLGYIIimiergdnnivtrflktpEVKKVDKPEDLKEKRRTASAADETQTIETIMKLEVLELKLGIRLLQLV--QGNSELLDKIKAIRKTIASELGFVIPQIRISDDSYLSPNEYQLYLKRIPLVKGRIEVDKFLAM-GGTGNEKLQGIHVKEPVFNLDATWITGDLREEALMKGFTVVDAPTIISTHISEIIKRHAEDIITRQDIVDIVERLKKDFPIVIEEAM-KVTSYGALLKVCKDLLHEKIPIIDMLTIIEAIADIAEFTKAPEILLEHVRAKLYRLITQKFKDTDGILHIITIKPDVEQQFIGKLQEHHGisqlmLSIAEINNLVTKTKQLLDDVEMKGFSKVcMVVDPVLRKRISEIYEKFGLQIAVLSHAELDSKANFAIEGTL---
>UniRef50_Q44909(13-693:697) Flagellar biosynthesis protein flhA n=23 Tax=Borrelia RepID=FLHA_BORBU  E=0 s/c=0.97 id=36% cov=96%
---------------------LIISVGLIFVVAGFILPLPAVILDVLITVNLVISLLIILIVLYSKRSLDFSVFPTLLLVMTIFGLVLNISSTRLILTKG---INFDGQMIRTFGTFVVGSSGIQGLvigfIIFIIIIAVQFIVITKGATRVAEVAARFALDALPGKQMAIDSAYSSGNLTEEEATRQKNDLQSEVNFYGAMDGASKFVSGNVKVGFLITLINILGGLLVGITLQGLNFNEALNNYVSLTVGDGLVSQLPSLLISTSTGLIVTRSISKNSFGGEIFDQFTNHLGIYWIVSGFLLFLAFLPGFPTLILMFLSLSIAFLAYSLSGIRQKEEIDKKMKLEEEQASIySDKDVSPVVPLDPLALEIGYNLVPIVDDTKTSELLDRIVKIRREIAFEFGIVVPKIRIVDNMRLEPNAYSFKLRGVEVGRGEIKLGKFLVINVGIDSG-IDGDLVKDPSFGLPSLWVNDDGRETAEKLGYTVVDPPSIIATHMTELIKRHSYEILTRQDVQNTLDVFKKDYGAIVEEVLKN-FSVGEIQRVLQGLLKEQVSIRNLVTIFETIADFTSITKDIFFLIEKCRQSVGRQITSGYLDLNSELNVITLNPSFEQMIIDSRVESnhdliSSIDPNLKTKFIYELFKIVNEVQAEGFYPVVLSSESSRPIIKVITSREIPDLVVMSVLEVPQNIKVNVLKTV---
>UniRef50_C3KN99(13-698:714) Type III secretion protein, RhcV family n=1 Tax=Rhizobium sp. NGR234 RepID=C3KN99_RHISN  E=0 s/c=0.95 id=35% cov=95%
---------------------IVVAAVVMLAITMMIIPMPTFLVDMLIGFNFFYSLLILVGALYISSPAQFSSLPSIILLGTLFRLALAITTTRLILTE-----ADAGQIVAAFGSFVVGGDVLVGLIVFLIITIAQFVVITKGAERVAEVGARFALDAMPGKQMSIDNEARSGDIDQQEARRKRDDLERESQFYGAMDGAMKFVKGDAVAGLIIIAINLIGGLAIGSLQRGLTVGEAAHTYSLLTVGDGLISQIPALMMAVAAGAVVTRVPSgrrPQDLSSEILGQLGASDRALALAAAILFGFGLVPGFPLIVFWPLAGLAGLLAYAARKRQAAEEVTGSAQNRREARPVspggrvvdhiagnLPGAGSDLGMAHRLTLTMGEGL---GERLPPPLFAERTESLAEAILEDLGIRVPAIGRLTDARLATAEFRIDFEGVPVVDGALLPDHLMAWDETVDLDILSIPYVTQPDlMGLKLVWIDRSHAAALDAAGVGYCEAADVVMTLVERVLRRYAPDFIDAQETRALLGRLEGTFGDLTKEVL-DVVSAQRLSDVLRRLIEEDVPITNMRIILQTIAERGAQIQNLQALADHVRAGLGRQICFRLADSNRIVSAYLLTRPFEDELRAAVEKNSGPAGAVPERLAAPILEELKKRREKagaQSRAAILTSMDLRRHIRNLLMRHDVQMAVLSYQEIAAEFSVQCLGYI---
>UniRef50_C4PL76(17-685:707) RhcV protein n=1 Tax=Bradyrhizobium elkanii RepID=C4PL76_BRAEL   E=0 s/c=0.97 id=33% cov=95%
-----------------------VALMLLLAIGMMIMPIPIIVIDMLIGFNLGFAILLLMVALYLSTPLDFSSLPGVILISTVFRLALTIATTRLILAEGD-----AGSIIHTFGDFVISGNIAVGIVIFLIVTMVQFMVLAKGAERVAEVSARFTLDALPGKQMAIDAELRNNHIDQHEARRRRAALEQESQLHGAMDGAMKFVKGDAIAGLIVICINMLGGISIGLLSKDMSLDAAMHHYTLLTIGDALISQIPALLLSITAATIVTRVNgpSKLKLGADIVSQLTASTQALRLAACVLLLMGFVPGFPLPPFVILAVLFAAASYVKVGAKGDEPAAKTGANVTASAPAPAQAQAQKQAAHAEALPIALFLAPnLTHSIDKDELEQSIARVSTSVSADLGITVPRIPARIDQNLSKSQFRIDVDSVPVERDVINPTQ-LVLNDDIANIELSGIPFRqDPETAR--VWIEERHAAALKAAGIGHHRPVEILALRLHSTLTRYAQRLVGIQETRQLLARMEQEYADLVKEVLRTA-TIPRIAEVLRRLLDEGIPIRNTRLLLEALAEWSEREQNAVLLTEYVRAALKRQICFRYANAHRVVAAFIIERETEEIVRVSVRETAvgpylVLDDWQSEKLLSQFRQIHSTIAQSQSQPVILGSMDIRRFVRGFLTRNGLDLPVLSYQDLASEFTVQPIGSV---
>UniRef50_P80150(29-643:645) Protein hrpC2 n=18 Tax=Proteobacteria RepID=HRC2_XANEU   E=1e-165 s/c=0.95 id=35% cov=87%
---------------------------------LMILPLPTPMIDTLLGINITLSVVLLMVTMYVPDSISLSSFPSLLLFTTLLRLSLNIASTKSILLH-----AEAGHIIESFGELVVGGNLVVGLVVFLIITTVQFIVIAKGSERVAEVGARFTLDAMPGKQMSIDADLRGGNLTADEARRKRARLAMESQLHGGMDGAMKFVKGDAIAGLVITMVNILAGIVVGVTYHGMTAGDAANRFAILSVGDAMVSQIASLLISVAAGVMITRVANENetrlsSLGLDIGRQLTSNARALMAASVLLACFAFVPGFPAVLFLLLAAAVGAGGYTIWRKQRdisgtDQRKLPSASRKGAKGEAPHIRKNAPDFASPLSMRLSPQLAALLDP---ARLDQAIESERRQLVELLGLPFPGIAIWQTESLQGMQYEVLIHDVPETRAEL-------------------ENTDDMQAALARQAISP---------------------------LHARAHLFVGIQETQWMLEQVAVDYPGLVAE-VNKAMPAQRIADVLRRLLEERIPVRNIKSILESLVVWGPKEKDLLMLTEYVRCDLGRYLAHTATAGTGQLPAVMLDHAVEQLIRQSIRATAagnflALPPEQANQLVEQVERIVGDHAQ--HPLAVVASMDVRRYVRRMIEARLTWLQVYSFQELGSEVQLQPIGRV---
>UniRef50_C5U3P7(33-296:398) Type III secretion FHIPEP protein n=1 Tax=Desulfovibrio vulgaris RCH1 RepID=C5U3P7_DESVU  E=1e-109 s/c=1.51 id=52% cov=37%
----------------------------------MILPLPTPLVDTLIGANMALSFVMLMMSMYVKSILDFSVFPTMLLFTTLFRVGLNITTTRLILLQ-----ADAGEIIFVFGEYALGGNFVVGAVVFVILTIVQFLVIAKGAERVAEVGARFTLDAMPGKQMSIDADMRAGVIDMEEAQRRRNTVSQESQMYGAMDGAMKFVKGDSIAGMIVALVNIVGGTVIGITQHGMAAGEALHTYGILTIGDGLVSQIPSLLVSISAGILITRSGdSGGNVGAQIGGQIFGQPKALLMAGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_A8DVR9(1-383:383) Predicted protein (Fragment) n=1 Tax=Nematostella vectensis RepID=A8DVR9_NEMVE  E=6e-98 s/c=0.94 id=40% cov=54%
---------------------------------------------------------------------------------------------------------------------------------------------------------------MPGQQMSIDADLNMGFIDQAEAQRRRKNIEKEAGFYGAMDGASKFVKGDAIAGIIILLINIIGGLVIGVMQHKLPWAQALKTYSLLTIGDGIVTQVPALIIAVGTGIIVTRSASDGNLSQEVLRQITSFPKTLLLVGAALTGLLFFPGIPALPTLVLIAVVATVAWVVYRNASNSAEDGTAPADAQDAAQPadaaqkgEDDPYASLQVEPIEVHVGSEWAALV-SQPGSVLMDRIATFRKQHAQDLGLVLPRVRFKDVARLGQDRYEIHIDGVVCGRGEARADRLLAIHPTGRTDGMPGEPTRDPTYGLPALWIEEHQRAAATVAKFTLVDAPTVFMTHLTEVLRRESATLLTRAEVDRLLNRVRQNQASLVEELIPTVLSVSD------------------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_B1TCM3(14-329:349) Type III secretion FHIPEP protein n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1TCM3_9BURK  E=3e-80 s/c=0.96 id=41% cov=44%
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ERIATFRDQYADESGFVAPAVVFRDSTQLPPDEYQVRLFGTRFGQAATYPGRTLAIHPAGVTGALPGAATQEPAFGLPAVWIDDDQRDRAKALGHTCVDPVTALLTHVTELIKTHAARLFGRAETIALLDGVRARQPGLVDEVVPNVLAVGDVQQVLQGLLAEQVPIRDIDLIVQTLADVARHEKDPARLVEAVRQRLGHAICQRAQGERDTLAVLTLDPALEAEIARNLAGADGhgthvLDPRLAEPFLGRLLAHTETMMRQGHTPALLCRPDIRRALKTFSRRVAPRLVVLSINEVPDAIPLRAFATVG--
>UniRef50_A9KQE5(68-257:266) Transcriptional regulator, XRE family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KQE5_CLOPH  E=8e-19 s/c=0.52 id=25% cov=23%
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSEPITLKVGCGFVDyLMKENQQG--FPKLQQVRINMAKESGYLLPTVRILDDITLDNHCFQILFYDKVVYEQN-------NLNPSSSEYP--------------------------------------EIFEQLNLTCTAHYEKLLHRQIVKDLIDNLSKLYPVLVDGYIPDKLSYAQIQFVLKSLIEHKKSIRNLCEIIEYLED---------------------------------------------------------------------------------------------------------------------------------
>UniRef50_B6AMB1(21-697:702) Possible flagellar biosynthetic protein FlhA n=2 Tax=Leptospirillum RepID=B6AMB1_9BACT  E=0 s/c=1.13 id=44% cov=96%
-------------------------VGVVGILFIMIVPMPPLLLDLFLATNITFSLVILLVAMTTKNLLEFTIFPSILLLSTLFRLSLNVASTRLILLHGQNGTGAAGHVIQSFGRFVVGGSYAVGLVLFAIFVVINFVVVTRGAGRIAEVAARFTLDALPGKQMAIDADLNSGAIKEEEARKRRKELSRESEFYGAMDGASKFVRGDAVAAILILFVNILGGLVIGMVLKGLDLPEALHNYTLLTIGEGLVAQLPALIVSVAAGIVVTRAGSGNDLGSEIREQVLTRPRPLGGASGILFLLSVIPGLPHAAFFLLASVTGLMAYRRTTLEKKKARELQAEE--KTVPPPAENVETYLSLDLLELNVGYGLVDLVEGKAGSNLTDRIRGIRRQLAQEMGIIVPPIHIRDNLQLKPDEYVVLLKGAPVARWELLPDSLLAMNPGMEPVTVEGIPVKEPTFGLPATWIAPDAREEVEAQGFTVVDPLTVLSTHLTEVIRSHAAELVGRQEVQRLLDALGKDYPRLVEDLVPGQVSLGVLVSVLHALLSERVSIRDLRTILEAVSDqiaAGRDSKDVTGLAEGVRQALGRSIVNPYLAGKaRSLPVVTFDRRWEEVFMKQASQTPpgsplVLEPGLAQKLLSGLGQVMESLGRKGVQPVLLVSAQTRVPVRRFLERYFSSLPVLSPMEVPKDVPIVSQEVV---
>UniRef50_B8FTQ1(1-682:688) Flagellar biosynthesis protein FlhA n=13 Tax=Firmicutes RepID=B8FTQ1_DESHD  E=0 s/c=1.12 id=43% cov=96%
---------------------VLAAIFIVSIVVMMVVPIPPLMLDILLTISISAAVLTLMISVFTKDPLDFSVLPSLILILTLFRLSLNVTTTRLILGEGH-----AGEVIQQFGEFVVKGSAVVGFIIFAILVVVNFIVITKGSERVSEVGARFTLDAMPGKQMSIDADLNAGMITETQARDRRQKIQAEADFYGAMDGASKFVKGDAIAAIIILFINIIGGFVTGVVMRGMDIMEALHTYTLLTIGDGLVTQIPALLMSTATGLVVTRAASETNLGEDLSRQLFHTPKALYITAGVAMVLAMF-GLPLLPLLIVAIVLVALGRVMDKGSQKAVVEESAAarETALEESKKPENVLNLLNVDNMELELGYALIALVDVQQGGDLLDRIVLIRRQVASELGFIVPVIRVRDNMNLQPNQYSIKIRGAEVAGGEILADHYLAMSSGLGDDNIPGIPTKEPAFGLDAKWINAVYREEVEMNGGTVVDAPTVLATHLTEVIKSNAWEILSRQDVKTLLDHAREQAPAAVDDAM-EHLDLGHLQKVLANLLRERVSIRDMVTILETLADYASTTKDLDRLTEYVRQSLARQIVQPLLGMDKQLPVLTLEPKLEQLILDSIQPSDfgsymTLDPRVLQELMQSLAREMEKMVLKGYNPVLVCAPVVRINLKRVTERQLPQLMVLSYNELVHGVQVQAVGMV---
>UniRef50_A3U131(19-699:701) Flagellar biosynthesis protein n=6 Tax=Rhodobacteraceae RepID=A3U131_9RHOB  E=0 s/c=1.11 id=40% cov=97%
---------------------IAFAVGVTLVLAVLFIPLPPIILDFGLAISLSLSVLILMVALWIPKPLDFNSFPTLLLVVTMLRLSLNVASTRLILSEGHTGPGAAGGVIEGFSRFIVSGNFVIGIVIFAILVVINFLVITKGSTRIAEVSARFSLDSMPGKQMAIDADLGAGLIDEQEAKTRRKTLEDESGFFGAMDGASKFVRGDAVAGIIITLINVIGGILIGVMQYDLSVADAANSYTTLTIGDGLVTQVPALIVSLAAGLIVTKGGTEGAANEAVLGQLSRFPKALYMAAGLLAGMGLLPGFPTIVFFALGGLMAGLGWYIGQQEERLAEDRRRAEIEKERAGAAAKEETVQSTmklDDLRLEMGEALVPLMSA-ADAALPGKIKSLRNLFAREFGFVLPSVRITDEPSLPMNSYAVLVQGVEVARGEVRPNGMMVVNPSDNPLQMAGEAAKDPTFGLDALWIQPQQAGEAERQGYTVVDPESVITTHLTEVVKEHMPDLLTYGATQGLIENLDRDYQKLVGE-IGGTSPAIMIQHVLQGLLGERVSVRNLPLIVEAIAEAKRTTSNVTGIIEHVRRRLSNQICKSLTDESGMIPVITLSQKWDQEFVDSIRMNGDdktliMSPQRIQEFVLDARRTIQTHAAEDRWPAILVSPDARSFIRNMLERVSPMTQVISHNEVHRNANLRTLATIG--
>UniRef50_B0K1R1(2-668:673) Flagellar biosynthesis protein FlhA n=15 Tax=Clostridia RepID=B0K1R1_THEPX  E=0 s/c=1.12 id=44% cov=95%
---------------------LTVALFVVGIVLLIMIPVPPVIMDFLLISNITLSIIILLTTMYVKDALDFSIFPSILLITTLLRLALNISSTRLILSNTY-----AGNVIQAFGSFVIGGNPIVGFIIFLIIAIVQFIVITRGAERVSEVSARFTLDAMPGKQMAIDADLNAGLITEKEARERRKEIQQEAKFYGAMDGASKFVKGDAIASIIIIIINIVAGLIIGMVMKGMDINRALNTYIVLTVGDGLVSQIPALLISTATGMIVTRSASESNLGGDVIKQLFNQPHILKVAAGLLFALVLVPSLPKLPLILIGSLFAYLGFAGTQKVTIKEEEQEENIKELENIRDPKKVYELLQVDPIELEFGYELIPLA----SGELLDRIVMIRRQIALDLGIVVPMIRLRDNIQLKPNEYIIKIRGNEIARGKVYVDRYMAMTAGEIDEDISGIREREPAFGLPAIWVDENERSKAEARGYTVVDVPSVIATHLTHVIKQHAHELLGRQEVQSLIDNVKTTNPALIEELVPKLLTIGEIEKVLSNLLREGLSIRDLVTILETLADYAPIIRDTDVLTEYVRQALARTISNKYAPY-GKIEVITLDPSVEQLISSSITQTEhgsylALEPSSAQRILKSIHELAKKVTLKGGQPVILTAPVTRFYLRKLVEQISPDIAVLSYNELLPNIEVASVETV---
>UniRef50_Q1D9J0(3-704:707) Type III secretion protein LcrD/AscV n=4 Tax=Bacteria RepID=Q1D9J0_MYXXD  E=0 s/c=1.02 id=38% cov=97%
----------------SKYSDIVLAVVVVAIVGMMIVPLPTLLLDVLLTLNISISVVLLLVSLYVPAALHLSVFPTLLLITTMFRLALTISTTRLILLTGDP-----GEVVVAFGNFVVQGNFVVGAILFIILVIVNFIVISKGSERVAEVAARFTLDAMPGKQMSIDADLRAGSIDQDQGKKKRRDLERESQLFGAMDGAMKFVKGDAIASIIITVVNIVGGLIIGVTQKGMSAGDAAQKYTLLTIGDGLVGMIPAILVSTCAGIIVTRVAGEEEgnhLGMDMGSQLTAYPKAIAIAAGMLIVLGLVPGLPKIPFFLLGIGAGLGAWTMLKKQQQAVEAEDAGPAMEtdlgtpmasEPAPKEALNPDselfIPVVTPIVLEVSDALVPFVDSRQDNGkfLFELIPFMRDGLFVELGVRFPGVRARGNGSLPPGAYQIQINEVPVVTGQATLGHVLVNDTVDRLRlmNIQGFEAVNPATRQPAAWVPEQYRDTLEAAGLTTWDVPGYIILHTAAVLRRNAREFVGVQETQTMLEQLEKAFPAIVKEVVPKVVNVLKLTDILQRLVEEEISIRDLRGILQALAEYGQVEADNVMLTEHVRAAQRRYISHKYARGTGTLVVYLLDPNIEDAIRGSVKRTSagahlALEPELAQEIVQAVRSECGHLPPSAQRPVILTAMDIRRYVRKLLEYEFnPSFSVLSYQELSPELNIQPVARI---
>UniRef50_A3ZZP0(7-688:695) Flagella-associated protein n=2 Tax=Planctomycetaceae RepID=A3ZZP0_9PLAN  E=0 s/c=1.04 id=44% cov=96%
---------------------LILPVGIIASVLVILVPLPNWLMNLLLTANITAGVIILLTTIYVQTPLEFNVFPSLLLATTLARLVLNVATTRLILTKaAEDGMDAAGGVIESFGEFVAGDKIAVGIIIFIIIIVIQFMVITKGATRISEVAARFALDGMPGRQMAIDADLNAGIIDEHEAQARRSEITQQADFFGAMDGASKFVRGDAIAGIIITLINIVGGFIIG-LQAGMSLAEAAEVYTKLTIGDGLVSQVPAFLISLAAGLLVTRSSQKTNLPLEFVQQLLSRPPALIVAGAFLGLL-VFTGLPTIPLLTLCGGCLGIAFFIKKQDRQDEADKQTAETKkqdqEKAAKKEDRIEDYLSIDPMEMELGVGLVRLAAPDRGGDLLHRVTGVRQNVATEVGIILPKVRIRDNMRLHENQYRIKITNNTVAENTIYPDRLLAITGPNSQGNLPGEPTRDPAYNQPAVWIEPGLRPQAEMLGYTIVEPSSVLATHLQRVAKKHADELLTRDATKHLLDDLKLESPAVVDELIPGVMKLGDVQAVLHNLLREEVPIRQLAIILETLGDHAGRTKDAIWLTEFVRHRLARTICTKYRDRENKMFVVPLDPAMQDRIAAGIDTERGpyarMSPQAIELTCRAVAAGIEKLLAVGKPPIVLVNPQIRPALKQLTMNHIPDLIVLSHNEVTRDTLIESVGII---
>UniRef50_Q01PP7(20-698:699) Flagellar biosynthesis protein FlhA n=2 Tax=Acidobacteria RepID=Q01PP7_SOLUE  E=0 s/c=1.04 id=43% cov=96%
---------------------LAVPLAVLAIVIALITPLPGFLLDLLIVVDILVSVTVLMVSLYLVRPVEFTSFPTTLLLLTLFRLALNVSSSRLILLNGNTGTAAAGEVIGAFGSFVVGGNYVIGAVIFLVLIAIQYVVINHGAVRISEVTARFTLDALPGKQMSIDGDLNAGLIDEAEAKRRRKALATEAEFYGAMDGASRFTQRDAVASILITAINIIAGFLIGVTQHGMDFRRALETYTVLTIGDGLVTVIPALMISISGGLIVTRASSEARLGAEFHKQILGNSQPLLLAAGVLVALAALPGMPKLPFLVLGFGAGAGGWRMRKTELAQIAAP--PEDTGKPAPAKDSVESLLRVEPLAIEVGLGLIGLVEGAQESPLLRRISAIRRQLATDLGYLLPPVRVTDNLSLRSREYVISLKGVEIARYELPQGCELAIATGAASAPLEGQATRDPAFGMNATWIPADRADRARHSGYTVVDSVSVLGTHLSEIIRRYAHELFSRQDAKRLLDRVGVEHPKVVEDVVPKLLPLSSVQRVLQNLLRERVSIRDAVSILEALGEAGASTRNPILLTEYVRQAIRRAVVKPYLNRAGDLPAWFVDPAIEHAVEAAVEHGEqnshiQLAPQHIREMLNRISARIQSPE---TPVVAITSSGARYFLRQIAEPTMPNLFFLAHNEVPPGVRVQSLGNI---
>UniRef50_Q3SJM4(16-682:692) Flagellar biosynthesis protein FlhA n=2 Tax=Betaproteobacteria RepID=Q3SJM4_THIDA  E=0 s/c=1.05 id=51% cov=96%
---------------------VAVPLLVLLILAMMVLPLPTFMLDVLFTLNIALAMIVLLVSLNARRPLDFSVFPTVLLLTTLLRLSLNVASTRIILMQGHTGPDAAGKVIESFGNFLVGGNIAVGFVVFLILVIINFVVITKGAGRIAEVAARFTLDSMPGKQLAVDADLNAGFVDESEARMRRAEIGREADFYGAMDGASKFVRGDAIAGMIILLVNLIGGIAVGLLQHDLGVGEALARYALLTVGDGLVTQIPALIISTAAGIVVSRASSEQDLSREFSTQIFGRPQTLYVAAAVLAALGVIPGTPHVAFLTIAAVLAALALWLTRHRESAAFDSTPLPPIEEEAlPVDVTWDDIPPVDVLALEVGYRLIPLVDRNQGGAALTRITESRRRFATDMGLVVPLIRVRDNLDLKPNTFRITLKGVDVAHGEMPTGQILAVDTGDVLGRIDGTPGVDPLMHLPGVWIDAARVEEAELRGFVVLEPAELIARQVEAVFRQHAPELLGRTEVQQLLDALARSHPGLVEDVTPRHLPLTTVQAILQQLIAENVPIRDTRTLFETLAARAPKTQDIDDLVETVRAALGRSIVDRLFEGSDTLLVIGLAPTTESRLLYEMgdEGEALLAPSTLDALNGAAEQAVAEHEAGGHPPVLLTSPGLRAILSRLLRRTLPRLAVIAYAEVPADKTVQV-------
>UniRef50_A9L223(10-672:685) Type III secretion protein, HrcV family n=27 Tax=Proteobacteria RepID=A9L223_SHEB9  E=0 s/c=1.03 id=34% cov=93%
--------------------------MLMVAVFMMILPLPTPLIDVLIALNLGLSIVLLMIAIYIRDPLEFSVFPSLLLITTLYRLALTISTSRLILLQHD-----AGDIVYTFGNFVVGGNLAVGIIIFAIITIVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGIIDAKEAKRQRAQVQKESQLYGAMDGAMKFVKGDAIASIIVILTNIIGGIAVGVMQHNMSAAEALNTYAVLSVGDGLIAQIPSLLISVTAGLIVTRVPGEqrQNLANELVMQVGRQPASLQMAGIVMFIFALIPGFPILVFGTLGSVVLGASLWLKRQQKRASAQG------EESHFTDAGKSDTANVDNMAPGAVPLILYLGADVPIHGVKEALQKLRWQWFEQLGVPLPEIQLQIAKKGSLGCCDVLLYQESVLQLQLVPQEALLIDS---IATIPCRVESIPFSNQRLHWIKGNALEQAEAQGLAVCRDEQIPAYVMGKVIDRYAGEFIGVQETRYLMDAMEARYGELVKEL-QRLLSVGKVAEILQRLVEEGISVRDLRTIFETLVEWVPKEKDIIMLTEYVRIALRRHIRRKFATPQGWIAVLMVGEGIENVIRESIRQStagsySALDMAQTQQILTCIQEQLPPE----QTCVLLTSLDVRRYLRKIVERELFSTPVLSFQELGDDAEIKVIGQV---
>UniRef50_C1F997(22-700:700) Flagellar biosynthesis protein FlhA n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F997_ACIC5  E=0 s/c=1.00 id=43% cov=97%
-------------------KSLALPVGAISVIFVMLVPVPAVLLDLLLGLSMATSVVVFLAAVQVRKAVDFSVFPTLLLLLTLFRLSLNIASSRRILLHGSTGTAAAGKVIEAFGQFVVGGNYVVGFVLFIALIAIQFLVVSHGAVRTAEVTARFTLDALPGKQMAIDADMNAGLINEATARQRRQAIAQEAEFYGAMDGAARFNQRDSLATILITTINIVAGLLIGTLQHGVALSQAVKTYTILTVGDGLVTMIPSLLVSVAGGIVLTRASSAGALETELGAQLFRKGTTLYIASGVLGALCLVPGLPKLAFLVPAVILAGIGRTVTKEQPAEEAAEEAGKKADPSRA--DNLDSVLKVDDLSLEIGFQLIPLVDEAQGGLMLSRVRTLRRHLAGELGFLVPAVHISDNLRLKPREYVVSLRGLEIGRWQTEANQLLAVSNEARPRPMQGKEVREPAFGANARWIAPELEEQALAAGYSVVDPATAISTHLAELIRTHAHELLSRAETKRLLDTLNESHPKLVEELVPKVMSLGEVQKVLQQLLREQVSIRDLGTILETLVEVAAQGRGLPAMVEAVRRALGRRLTQKLLDSDGSLPVMVLEPALEEALIAATQSEPPTDalldrrtPASAQ-LFARISESLKKLSQNHpssALPVLLCQSPARYYLRRWLEPVFPRITVLAPPEIGPEIRVHSIGVLRG-
>UniRef50_C5EZ65(20-750:754) Flagellar biosynthesis/regulation protein flba n=4 Tax=Helicobacter RepID=C5EZ65_9HELI  E=0 s/c=0.92 id=43% cov=96%
--------------------------FIIAILAIIIVPLPSALLDFFLAISIALSALIILIALYVKKPTDFSAFPTLLLIVTLFRLSLNIATTRMILSNGHLGPEAVSDIITAFGQFVVGGNYVIGIILFIILVIINFMVVTNGSTRVSEVKARFTLDAMPGKQMAIDADLNTGLIGQEEAKARRDELAAEADFYGSMDGANKFVKGDAIAGIIITLINIIGGFLIGVFQKDMSVADAASTFTILTIGDGLVSQLPALIVSTATGIIVTRFSKEgENFASGIVDQLINESKTLMIVGCILLLFALVPGLPTISLGFVGLLFLtlalllnkqkdGEAWkyveslFKKVRKGKAEEGQAPLPQrqtqrasggqtpqnAQQAAPKPQPqeseeerrkreeaeIDKALKVKILRVGLGYQLIKFADPAQGGELVNKIRAIRKTMATEYGILVPMVHLRDDLNLAPDEYQILLKEIEIGKGKIMVDKYLAIASSGFVGELPdGIPTKEPVFGLDAYWIDEDKKEDAIIEGYTIIDGATVISTHIQELIKQYAEELLTRQEVANLVAKLGQDYPILAEEI--KGVGIGTIQHILKELLHEQIPIKDMLSIAEAIADGYPAYKaDLPTLSEYVRACLKRLITHNFQSDDGVLKYFVLSPSLEQFLLEklpdqqKIGQRLRLSPTESQSLLDAINVAYQKGVSMGAVPTIIggVPMVLRKPLAIFLEQYGFgrNIVVLSTAEIDYQSKFEILGSI---
>UniRef50_B4EYD9(15-699:699) Type III secretion system protein n=5 Tax=Proteus RepID=B4EYD9_PROMH  E=0 s/c=0.97 id=33% cov=95%
--------------------------VMILVIMMLIIPLPTYLVDFLIGLNITIAILIFMSSFYIKRILNFMTFPALLLITTLFRLALSISTSRLILLD-----ADAGEIITSFGEFVIGENLVVGFVVFSIVTIVQFLVITKGSERVAEVAARFSLDGMPGKQMSIDADLKSGIITNEEVQIRRKELGQESQLYGSFDGAMKFIKGDAIAGIVIIFVNLIGGISVGMAQMGLSITEALHTYTLLTIGDGLVAQIPALLISISAGFIVTRVGGEnNNLGYSIMNELLAQDFALLVTAILAFGIGFLPGFPTPVFLILSVMLG--VYFFKIKWKSSKKEYKTEDEKDNHNATNADSKKGLMSNLFsgkhGEEVDNSLLTENITLSQAETLPLIitlstkkkpyltkivfeKWLQKEFILQYGILLPDIVIHYSDKIDDDKIIILINEVKAKELNCPFPLFHIENPNDELLSLGFNLISIEDDNKTHYWIERDDESKLAPLGYKAERSESYFYRKFSDLITLNITEFLGIQETKDILDKLEKSAPELLKECY-RQVSIQRINDVLQRLVQEKIPIRNIKTIIGGLVQWGSKEKDPVLLTEHIRTLLARYISY-FFSTDGKFNAIILSNDMEEIIRSGIRQSSsgtllNLEPAELDMIIEKISMVIDDIKYIQ-DYIFLTSIDIRRFVKKLIETQYPQIPVLSYDEITSDIEINVLQSI---
>UniRef50_P55726(29-675:697) Probable translocation protein y4yR n=4 Tax=Rhizobiales RepID=Y4YR_RHISN  E=0 s/c=1.02 id=33% cov=93%
--------------------------------SMMVMPIPVMAVDALIGFNMGLAVLLLMAALYVSTPLDFSSLPGVILLSTVFRLALTVATTRLILAEG-----EAGSIIHTFGSFVISGNIVVGFVIFLVVTMVQFMVLAKGAERVAEVAARFTLDALPGKQMAIDAELRNGHIDADESRRRRAALEKESKLYGAMDGAMKFVKGDSIAGLVVICINMLGGISIGLLSKGMSFAQVLHHYTLLTIGDALISQIPALLLSITAATMVTRVtgASKLNLGEDIANQLTASTRALRLAACVLVAMGFVPGFPLPVFFMLAAVFAAASFVKGDVLDADKVDATTVTPAESQTP-----NVAAQPNPIGVFLAPSLTNAIDQV---ELRQHIARISQLVSADLGIIVPPIPVDVDQQLPESQFRIDVEGVPVEQDLINPAQ-LSLADDLKKIESSGIPFRHD-PETHRIWVEQSHEPALKAAGIRHHSPSELLAMRVHATLTCHAPRLVGIQETRQLLGRMEQEYSDLVKEVL-RTTPIPRIADVLRRLLGEGIPIRNTRLVLEALAEWSEREQNVALLTEHVRSGMKRQICHRY-GRHGVLPAFVMERETEDVVRCAVRETAagpylALEDRQSEALLSQMRQVFSSTAPGQTRPIVLTSMDVRRFVRGFLTRNGIELAVLSYQDLASDFKIQPVGSI---
>UniRef50_Q0C5I9(16-691:692) Flagellar biosynthesis protein FlhA n=13 Tax=Alphaproteobacteria RepID=Q0C5I9_HYPNA  E=1e-172 s/c=0.90 id=36% cov=96%
------------------------AIGLMAIILVMVLPMPAWVLDVGLTLSFALSILIFTTVIFVEKPLDFSSFPSILLASLVLRLALNVSSTKLIIGEGHTGTDAAGGVIEGFAMFIMGGNLFVGLVVFGVLVIVNFMVITKGAGRMAEVGARFALDAMPGKQLAIDSDLAVGAITHEEAKLRRQREQEEAGFLGSLDGASKFVKGDAIAGLLITALNLIAGIGFGVVAHQLSVVEALNNYSILTVGDGLVSQIPAVIVSVAAALLLSKGREEGAIDRALGLQLAGNSTALYIVAGILAIFALLPGLPFLPFIAGAAGFAAVAYFTKKAADEKAASEETKP--EDAAPKAPKIGDSIYADEIHLEVAPDLVNMVLVGENG-FESRIDKIRRYIAEEYGFVLPPIRMTDNPTLKKNEYRMRIQGVRVDSGILRPGQVLALIEENQLPHLAGEKVREPVYKAAARWLPSAKKQELAAAAVPVVEPIEVLATHMLEVIQSNFSLVFTRMVMMETLDALaaisdvdrASANKRFLDEYIPGKVTPELLLSVLRMLLTERVPIRNLFLIIETVAEAKPQALPLPRVIELVRQRLAFQIVDRLQDDQGRLPLIQLSTSWEQKFTEYEVTNEsggsdiALPPEIFGELINSVQAKLNETAQKGIIAAVATSSRRRRFLQTVLASKGIRNAVVAYEEINSKSKPYIIGV----
>UniRef50_B9JJ70(5-637:644) Type III secretory system inner memberane protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JJ70_AGRRK  E=1e-168 s/c=0.94 id=33% cov=88%
--------------------------FFAVIVVMMVLPMPTVLIDAMIAFNLAFAFVVLVTTIYLRNVLDISTFPAVILIGTLFRLALTISTTRLVLAEGD-----AGEIISAFGSFVVAGNVVVGLIMFLIVALVQFIVVTKGAERIAEVGARFTLDAMPGKQLAIDSDLRSGHISGEAAQKRRSQLERESQFFGAMDGAMRFVKGDAIAGLVIVAVNLLGGLAIGIFQRGLSFSEAAQLYSLLSIGDGLVSQIPSMLMAVAAGTVVTRVSADEstNLGSEIGRQLIKEPRALGIAAAITLGAGLIPGFPTTVLWPIGIGLATLALVLvrKRRSQSPELDAATGMAHQQNGTATAALDRAKYGDPIVATLSAATMSRLEANNlGGHLDARIRVA----ARAVGVAITVPTFNADPRMGEDMIHIQVENVP-----------------------------------------------AGLISCKADRPAELIAQDIVRIVRRHTGSIFSVDDATQWLASLEPRLGKLAID-VRTQVSPMLLVAVIRRLLDSGVTLSQPRGLLETMLKIEPHEQDPDKLAEKARWALSRQIAFGLLDQRGLLPVLSFSPEWERFVRSYSDASDKTEkeeiSEKLRRLANETKDALVDANERGFDPVVVMPGELRFLTQALMIRHNCRVPVVAIEEIDHDITSDVVGMVG--
>UniRef50_Q1D0P1(9-681:688) Type III secretion protein, FHIPEP family n=6 Tax=Cystobacterineae RepID=Q1D0P1_MYXXD  E=1e-163 s/c=0.86 id=35% cov=94%
---------------------VVLAVAMAAVLGALIIPLPAWLLDAGLAVNLAASVALLVAALRARDALKVTSFPTLLLFTTLFRLALNVSSTRLALAEGH-----AGDVIQAFGEFVVRGDYVVGAVVFAILTLVQLLVVTKGAERVAEVSARFTLDAMPGKQMSIDADLRAGAIDQAQARRRRRDLERESQMFGAMDGAMKFVKGDVIAGLVIVAVNLLGGTVIGVLQGGMPLAEAASTFALIAIGDGLVSQVPSLCIAVAAGLVVTRVASekeEDTLGAEIGAQFFGEARTLWVVAGLCVALALMPGMPHVTFLLLAGGLGGLGHVLSRAgvpkvEEKAGAPADGVAPGAAGAPPESAASPVG-VSPLTLDMAPDLTVLAEAEGAAFVHKTLNGVRDELFFELGVRVPGIRVRTQAAyLGPGEYRVLVDEVPAGGGQVLPGALYALAPPDELAflQVSAEAATEPSSGKVISRIPESARVLLETAQVPLRRPGELVSDHVRAILRVRAADLLGLQDVQGLLEGLEAQAPVLVKEALQK-VPLPLLTDVLRKLLQEGVSIRDLRAILEALV-SPTTEGDAVALAERCRQALRRYLSHKFAP-TGPLYAYLVDPEVEEVLRGMGPRGLAPDPERVAEILEGVRQVATEG-----RAVLLTAPDVRRPLRRLCEGAFPDVAVLTYGELDGALQIRPIG-----
>UniRef50_A3ZLT3(97-443:489) Flagella-associated protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZLT3_9PLAN  E=3e-83 s/c=0.90 id=33% cov=48%
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EPWRSYLAMDRLSLEVGQSLISIVAPESK-DFFDRMTAVRCQLADSLGIVVPNIRMRDNRQLSDNEYRILIDENELARARFGPGKYIALDMGTATETLDGSPGVDPTFGGPGIWIRADQQHEAEKAGYLVIEPSMLLVTHLQETLRRHSHEMLTLDDVRRLIEMQRDDQAAEVEELRASPLSLSTIHAVLVRLLEEGVSIKNFSRVLETLVRHGARTGDVELLVAAVRVRLGRQICQRYLDRDGRVHAIGLEPDLEDRLLELNDAGAGRKARPwVERLIDNLADSFQQLEEQQQPTALVTSIDLRCNLWRMITAQLPRVAVLSFAEVPRNTEI---------
>UniRef50_C5U3P6(1-296:298) Type III secretion FHIPEP protein n=1 Tax=Desulfovibrio vulgaris RCH1 RepID=C5U3P6_DESVU  E=8e-70 s/c=0.90 id=25% cov=42%
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MPFPGINVRPNPALPGLCYVLNLNEIPMSRGVLEKGMSLVRDTRENLA-MMGVAVREGERFLPevePLWVPDEQCRLLEKAGIGHMSHARILAYHLSLVLSRHASTFIGMQEAKYLLDRMEERAPDLVREVT-RLLPVQRIAEIFQRLVQEQVSIRDLRSILEALIEWSAKEKDTVMLTEYVRSALKRQISYMHSRGQNMLPAILLDPGVEETIRKAVRQTSagaflALEPAVTERFMKAVADAAGPYAQQTQKPVIMTSMDIRRYVRRLIEGDHYTLAVMSYQELTPEISVQPVNRI---
>UniRef50_D1B6A5(10-696:697) Flagellar biosynthesis protein FlhA n=19 Tax=Bacteria RepID=D1B6A5_THEAS  E=0 s/c=1.14 id=44% cov=96%
---------------------VGMAVLLVLIVGMMIIPLPTWLLDVLLALNITFGVVILLSTFYVKQALEIAAFPTILLMATLFRLALNVSTTRLVLLNGY-----AGEIINAFGNFVVGGNYVVGGVVFLILVIIQFLVITKGAERVAEVAARFTLDAMPGKQMAIDADLNAGMIDEQEARKRRANVQREADFYGAMDGASKFVKGDAIAGLIITAINILGGLAIGVLQRGMELRQALSTYSLLTVGDGLVAQIPALLLSTATGIIVTRAAGESDLGRDMVASMTRNHRPLYIGSGLLFALAVVPGLPTIPFALLGSAMAAMAYGIQREAAEAEVPAGRGEGSPQPKGAPGAPSappsapsgpenvlPLLTVDPMEVEIGYALIPLVDPSQGGDILERIGTIRRQMAMDLGLVVPPIRIRDNIQLKPTEYVIRVKGAEVGRGELLPDHYLAMSTGGE-DLLVGIPTKEPAFGLPALWISPEIRDQAEGLGYTVVDCPSVLATHLSEVIKRYGADLMTRQEVQKLVDLVAETNPAITKDLL-DVLSLADVQKVLQGLIREQVSIRDLVTVFETLADHGRYTKSPDYLMERVREALSRVITLKLQDQDGVLGVYTLSPRWEQRIKECIKGDlmqgwqLNMPPKEMQELMEAVGAAAEAMVMGGLTPVLLTHPDVRLVVRRIVEGSLPQLFVVSYNEIAPSTQLRSLGVV---
>UniRef50_Q5WFS0(2-675:678) Flagellar biosynthesis protein FlhA n=4 Tax=Firmicutes RepID=Q5WFS0_BACSK  E=0 s/c=1.15 id=42% cov=95%
--------------------------GVILIIVMLIIPLPPFLLDVLIIFNISLSLLILLVAISTKDALDFSIFPTMLLLVTLFRLGLSVSTTRSIL-----GNAEAGNVIDTFGSFVIGGNAVVGFIVFLILIVIQFIVITKGAERVSEVGARFTLDAMPGKQMSIDADLNAGLISDREAKQRREKIEHEADFYGSMDGASKFVKGDAIASIIIVIINMLGGLMIGMMQMGMDMNTAASTYTLLTVGDGLVTQIPALLISTATGVIVTKAASEGNLSTDLSRQILAYPKLLYVTAATILLLGLATPITKVVTFSIAGLLAFAGYRLSKASLAKANFEEALLEEAPPEEPSGPESVVQLlqMDPIEFEFGYGLIPLADANQGGDLLDRVVMIRKQMALELGSVIPVIRIRDNISLEPNSYTIKVKGAVVAKGEVLLDHYMAMSTGEQDDSIVGIETIEPAFGLPALWVDEDMRDRAEMAGYTVVDPPTVISTHLTEVLKAHAYELLGREETKQLIDHLKESYPTLVEEVTPNPLTTGDIQKVLRNLLREQLSIRNLPVIFEALADYGPLTKDMNVVTEYVRQALSRQITTQLTNGGNELFVITLAAAVEKKIADAIGQNEngsflALAPADSQAILQNTAKEVQKVAELGRQAVILCSPAVRMHMRQLIERHLPYVPVVSYNELEPDVEVQSVGVV---
>UniRef50_A9KND9(2-675:677) Flagellar biosynthesis protein FlhA n=13 Tax=Firmicutes RepID=A9KND9_CLOPH  E=0 s/c=1.11 id=38% cov=96%
---------------------LGIGLFIISSIIFLIVPMPATLLDFLLALNISISMIILFNALFSQEVLNMSTFPTILLFTTVFRISLNVSSTKLILSSGNP-----GAVVTQFGRFVGQDDVIIGVIVFIILIIIQFIVINKGSERVSEVTARFTLDAMPGKQMAIDADLNTGAITDAQARERREKIQEESNFFGAMDGATKYVKGDAVAGLIITVVNMIGGTVMGMMKAGLPAGEAFSKYAILTIGDGLVSQIPSLMISLATGIVVTKVSKEADIGDLLMKQLFSIPKVLYMVGGALTFLGIVTPLPFIVFAGYGAMFIFCGRVIDKRVKIASIEEEASTEEQSGEEIRRPENVVslLQVDQIELEFGYGIIPLADVNQGGDLLDRVVLIRRQIALELGCVVPTIRLRDNIQLNPNQYVIKIKGIPLSEGEILFDHYMAMNPGYVEEEITGIPTFEPSFHLPALWITESQRERAESFGYTVVDPPSIIATHLTEVIRGHLDELLTRQDVQNLITNITEANHTLVSELVPKLLGVGEIQKVLQNLLKEGISIRDLVTIFETLADYAPTTRDTDVLTEYVRQSLKRAISNKYFGPNEMTSVVTLDPKVEQEIMNSVKQTEqgaflAIDPEKTQSIMKSVKDEVEKLENLGKNPIIITSPIVRMYFKKLTKEYFNDLIVISYNEIESNVELQSVGMV---
>UniRef50_Q5DY37(5-694:697) Lateral flagellar export/assembly protein (FlhA-like) n=72 Tax=Proteobacteria RepID=Q5DY37_ECOLX  E=0 s/c=1.06 id=44% cov=96%
---------------------LGVPLVILCILAMVILPLPPALLDILFTFNIVLAVMVLLVAVSAKRPLEFSLFPTILLITTLMRLTLNVASTRVVLLHGHLGAGAAGKVIESFGQVVIGGNFVVGFVVFIILMIINFIVVTKGAERISEVSARFTLDAMPGKQMAIDADLNAGLINQAQAQTRRKDVASEADFYGAMDGASKFVRGDAIAGMMILAINLIGGVCIGIFKYNLSADAAFQQYVLMTIGDGLVAQIPSLLLSTAAAIIVTRVSDNGDIAHDVRHQLLASPSVLYTATGIMFVLAVVPGMPHLPFLLFSALLGFTGWRMSKRPQAAEAEEKSLEtltrTITETSEQQVSWETIPLIEPISLSLGYKLVALVDKAQGNPLTQRIRGVRQVISDGNGVLLPEIRIRENFRLKPSQYAIFINGIKADEADIPADKLMALPSSETYGEIDGVLGNDPAYGMPVTWIQPAQKAKALNMGYQVIDSASVIATHVNKIVRSYIPDLFNYDDITQLHNRLSSMAPRLAEDL-SAALNYSQLLKVYRALLTEGVSLRDIVTIATVLVASSTLTKDHILLAADVRLALRRSITHPFV-RKQELTVYTLNNELENLLTNVVNQAQQagkvmldsvpVDPNMLNQFQSTMPQVKEQMKAAGKAPVLLVPPQLRPLLARYARLFAPGLHVLSYNEVPDELELKIMG-----
>UniRef50_Q04SD6(9-683:705) Endoflagellar biosynthesis protein n=6 Tax=Leptospira RepID=Q04SD6_LEPBJ  E=0 s/c=1.05 id=39% cov=95%
-------------------------VGAVAIVAMLVIPLPGLILDILIIVSLAIGLLVLLTSLSVNEPADFSIFPSLLLITTLYRLALNVSTTRQILSKG---PAMNSHVIDAFGSFIIGsesglSKYVVGFIIFIILVLVQILVITKGATRISEVAARFTLDALPGKQMAIDMELSSGNINEEEAKKRRKRIEAEVDFYGSMDGASKFVQGDVRAGLIITAINLLGGVIIGSSIRGESFTQAIETYGKFTIGDGLVSQIPALLTTVATGIIVTRSGSESDLATQFKSQLFSNSKVLYVVAGSLGFSAFIPGLPFIPLVILSAGIAYLGYSLEQTVKEQLESIEKKEKESGQDRKPKDFYEELRTDPIEIEVGYHLIPLVDTSQGGALLDQISNLRKKFAQDNGVVIPPVRILDNLDLNPDTYSIKINGTEVGISTVKPDKLMALNtSPGTAESIQGEDFLEPSFGQKAKWISSEDKSEAEAKGYTVVDASTVVVTHLKELLATHASTLLGREEVKKLLDHYKTSYPTLIGELdADKPGNLGIIQQVLQNLLREGLGIRNLVPILESIANNLSKYQNPYILTELVRQSVARTVVKDYLSIDGKLRVITLESRILDRLNKSItqdrienRDVLSLAPDFYKKLIDSVAELYRNFRMEGKFPIFVVNRDVRLPFSYLLAKEFPprNFGVLAYEEIHSSV-----------
>UniRef50_Q2RZE9(1-672:693) Flagellar biosynthesis protein FlhA n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2RZE9_SALRD  E=0 s/c=1.05 id=45% cov=95%
---------------------------IVAILFMMVVPLPSYLLDLFLATDIALSLGVLLTSFYAERPLEFAIFPGLLLTTTLFRLSLNVASTRLIL-----GNAEAGALINAFGSFVVAGNYVVGAIIFLVLVIINFVVITKGTERISEVAARFTLDAMPGKQMAIDADLNSGLIDEREARERRDEVTEEADFYGAMDGATKFVRGEAVAGILITAINVVGGLVIGVTQQAMGIGEAASTFALLSIGDGLVSQIPALMVSTAAGIIVSRASGEEgSLASEMKGQLLDKPPPLLITGCFLGVMGFVPGLPIIPFWLLSAGVLLLWYLRSKEKKAEDeaeaERQREAEEQQAEEEAEEDPSDLLLVDPLELEIGYGLISLVDPDQGGDLLERVKMLRKQLAEEMGLVIPPVRIRDNVDMDSNKYVIRLRGNPIGEGQVMPGYKLALLPDDVDEAPSGIRVEDPTFGLPAVWVAERNLSEAEQMGLTVIEPPAVISTHLLEELRKNAYRLLDRQEVREMLDKVEESAPALVDELVPDLLSLGSIRKVLQRLLEERIPIRDLVTILETLADHASQTQTVEVLTEHCRAALAPTITREFSGPEGRIKAFVMDPALEQHLLETAESGGldantlGLQPERADALVKAIDEQATELISNDRAPILLISPVLRATVYQFLDPMVSDITVLSYNDLTPDAPVDIV------
>UniRef50_P0A1I5(15-686:686) Protein mxiA n=161 Tax=Proteobacteria RepID=MXIA_SHIFL   E=0 s/c=0.99 id=34% cov=96%
---------------------LIILVLMVMIIAMLIIPLPTYLVDFLIGLNIVLAILVFMGSFYIERILSFSTFPSVLLITTLFRLALSISTSRLILVD-----ADAGKIITTFGQFVIGDSLAVGFVIFSIVTVVQFIVITKGSERVAEVAARFSLDGMPGKQMSIDADLKAGIIDAAGAKERRSILERESQLYGSFDGAMKFIKGDAIAGIIIIFVNLIGGISVGMSQHGMSLSGALSTYTILTIGDGLVSQIPALLISISAGFIVTRVNGDsDNMGRNIMSQIFGNPFVLIVTSALALAIGMLPGFPFFVFFLIAVTLTALFYYKKVVEKEKSLSESDssgyTGTFDIDNSHDSSLAMIENLDAISSEtVPLILLFAENKINANDMEGLIERIRSQFFIDYGVRLPTILYRTSNELKVDDIVLLINEVRADSFNIYFDKVCITDENGDIDAL-GIPVVSTSYNERVIsWVDVSYTENLTNIDAKIKSAQDEFYHQLSQALLNNINEIFGIQETKNMLDQFENRYPDLLKEVF-RHVTIQRISEVLQRLLGENISVRNLKLIMESLALWAPREKDVITLVEHVRASLSRYICSKIA-VSGEIKVVMLSGYIEDAIRKGIRQTSGgsflnMDIEVSDEVMETLAHALRELRNAKKNFVLLVSVDIRRFVKRLIDNRFKSILVISYAEIDEAYTINVLKTI---
>UniRef50_UPI00016C3B57(41-699:720) flagellar biosynthesis protein A n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3B57  E=0 s/c=1.00 id=44% cov=94%
--------------------------------VIFLVPLPTIVLDMLLAFNISATLLLLLVTLTVKQPLEFSTFPSLLLLLTLFRLALNVATTRLVLLNGD-----AGTIVEAFGKFVVGGSLIVGLVIFLILIVIQFVVITKGAGRVSEVAARFTLDSLPGKQMAIDAEMNAGMIDEAEAKRRRTSLMRESEFYGTMDGASRFVRGDAVAAIIITAINLFGGFIIG-LTKGMPLAEAVRRYSILTIGDGLVTQIPALITATASAMLVTKATSGTSLGEELGGQFSAASGPFRLAAFILIALALVPGMPMLPFLALGVALLLLSRRMSRVPELPPaakaeaAAAAAAAAAPSKSPVEGYLDDFLQSDRVSLEIGAALIPMVSARRGPGLIDRIGGLRRDLAKQSGLWVPAVRVRDNLQLDPPTYRILLGGREVARGDVRPDLWLAIDPGGAARvPLTGEDAREPAFGLPAKWISEADRNRAEAAGFTVVDSPNVIITHLGEVVRRHAGELLGRDDLKSMVDRVRETTPAVVDDLIPNVVSMGLLHRVLTQLLDERVPISNLPRILESLAAHAPTVKDPAELAERVRVDLGRAVVDRFRDPTGRIRAIVLDPRLELDLKRAVQNNQlIIDPSRLEQLTMRVAAELRKAGARGYEAALLCDAGLRRALRHSLARALHDLSVVSYQEIPTDLLMEPVAVI---
>UniRef50_Q48IR5(14-704:727) Type III secretion component, putative n=7 Tax=Gammaproteobacteria RepID=Q48IR5_PSE14  E=0 s/c=0.92 id=34% cov=95%
---------------------VIIVAFMLMAIAMMIIPMPTYLVDALIGVNIALSLLILIVAFYINHSVEFSALPPLILLSTLFRLSLSITTTRLILLDGN-----AGHIVKAFGDFVIAGQVVVGLVVFLIITVAQFVVITKGAERVAEVAARFTLDAMPGKQMSIDNDLRNGDIDPFEARRRRSRLERESQMFGAMDGAMKFVKGDAIAGLVILFVNLLGGMMIGMVQRGMPFAEAAHVYSLLTVGDGLIAQIPALLISVAAGTVVTRVNSDGeerDLVTEIVRQLSASHRALGLTALILLGVGMLPGFPLLVFVGLAAVLGGSAFVLWRRDRRAARSLVKDELQEHETMAEPgassgasgasndaaedalESAERPRDSQVLLSIGTGLAEAAPLQP---LRQRIEALCHDIRINLGVEVPLPEVYLDRSLPVDRFQVELEGVPVSEGE-FSGMALLLQDDPVHAQLVSVETFEapsPIGSRPGRWAGREHADRLQDAGIGFLFADEVLREVLDRTLRRYAADFLGIQETRLMLEQLEGKYGELIKEVL-RILPLQRIAEALRLLVSEGVSIRSRRGLLESMVEWGSIESDAGRLTEHLRAGLARQISHQYADRNRVISAFVLAPALEEQLRATLarqeKSRDSLPDDIGRTVLVQLRRLC-DMLPEHDLTVLLVHSELRRCMRRLIVRGELQLAVLSFRELASEYNLQAVGTV---
>UniRef50_A1EBT8(19-685:687) SctV n=1 Tax=Lysobacter enzymogenes RepID=A1EBT8_LYSEN   E=1e-179 s/c=0.95 id=38% cov=92%
----------------------------VTIIGVMILPLPLAIIDTLVAVNIAIGFGLLLIALYIPTPVAFSSFPSVLLLTTLFRLSLSIAITRSILLEAN-----GGHIVETFGSLVAGGNLVVGFVVFLIITVVQFIVIAKGAERVAEVAARFTLDAMPGKQLSIDSDLRAGLIDKDEAKRKRRLLEVESQLHGSLDGAMKFVKGDAIAGIVIIIINLLGGLAIGVLQKGMPLADATHTYSILTIGDGLVSQIPAILATIAAGLVVTRTAGDEDdrhLGESITRQVSGQPRVLLITGFLAFGMTFVPGFPKLVFLMLSVVLLGFAAWRYRHHhpvlRRAFKVPEGERPAEEKTVNE---DEIAPPAPLQLELAPSLAAAF---GEHAARTRIVEIARRLREEYGVPLPVPALKISPdldgDDGLGGYRLTAFGARLAFGRLSPNAQFrpARAGDANAPKLPG--FFPPLAGE---WT--------GQAGADIRDGLATVSEHCRAALERRLASFIGIQEASNLFGRMQRDYPDLVKEML-RVVAPQRVADVLRRLVEEGVPIRNLRDAFEAITDVGGREKDVVLLTEYVRVALKREIADRYADGERTMQVLLIHPELEDRLRQSVRVAGgatqlAISPELAGRLGAEVRSHLARQ-GEGIKPVLLCSLDVRRHLRKLLEIDFFELPVLSYQELAPDLRIVQAGQV---
>UniRef50_A0RCA3(23-692:693) Flagellar biosynthesis protein n=48 Tax=Bacillus cereus group RepID=A0RCA3_BACAH  E=1e-178 s/c=0.94 id=33% cov=94%
-------------------------------VVALLIPLPPFILDIIIVFLLSMSVLIYMRATSINEWDELKSFPTMLLLIGIFRVSINVSTTRAILTNGN-----AGHVIEEFGQFVIGGNLLIGIVIFTVLIIFQFIV-ANGASRTAEVAARFTLDSLPGKQMSIDADLNQRIITEKDAQAKRKKLNMETEFYGAMDGAGKFIKGDVIFGIVILFVNIIFGLIVGMMQQGMSFGEAALHYTQLTVGDGIVNQIGSLMLAISTGIIVTRVfdGSPDTVTEGIFKELLAHEVVVYALGGLFIAMGIFTPLPFLPFALVGGTIIFLGIRNKKRIKKEKEDELQKEIEmiqgedEQLQQVEDSFGVFTDKYPIIVELGLDLAALVKQKINGETaRDKVVLMRKSIITDLGINVPGINFKDNTSFRPrGRYIIRIKGAKAAEGVLKSGYLLALKTPNVMADLDAEPAKDPIFGEDGYWILEHMVQDAQMKGYQVLEPLSILITHLDVVVRRNLHELIQRQHVKDLINSLENDNGVLLEEIKKKEIDLSLVQNVIKQLLKEGISIRDLPTIIEGIIDGKEIYQNhVDGVTSFVRECISKVICENAKNPDGKIYAALFSDSIEldaDVVNNSYQGYlLNWDLDLETRVVEQVQRVFKQARLMGREPVLLTRRkDFRFAIVRLLERYQVEAQVLCISELAPEIVVDQIAYI---
>UniRef50_Q11M51(30-678:691) Type III secretion FHIPEP n=1 Tax=Chelativorans sp. BNC1 RepID=Q11M51_MESSB  E=1e-174 s/c=0.94 id=31% cov=93%
-----------------------------------ILPLPPAAMDLMITLNVSASIIILLMSLQMHNPVQFSTFPALLLVTTLFRLSISISTTRLILLEGD-----AGRIVETFGQVAMGGNLAVGLVTFLIITVVQFLVITKGADRVAEVGARFTLDGMPGKQMSIDADVRAGNMDQLDARHARQNLEREAKLFGAMDGAMKFVKGDAIAGLVITVINLVGGVAIGMAQRGVGFGEALSLYALLTVGDGLVAQIPALLISVAAGNMVTRVTNPNgmDLGAEIAQQFVANRRTIVMAGIIIALFGLVPGFPTWIFVSVGSAMTGGVIWTIRRQHRDVLSAQT-DWSLRLDLLQRQCAEIAMRTGAKEAVRLILPKEIYKLDVTAFFSAFEAVRISIAQEYGI-PTGYWLFEVDEGSPHSYQIYVNQELADCGIFRADSLFVKAHTSYLDAL-GIPWLSGFGRREGALVPTDQEQRLAEENIVYWRPMEQLLMHLKRVAVERLDVMASLQNITAILNEVQTNNPALVGDL-REAASNNQIAGVIRNLLRERIPVTSRVRILEGILKWSQKRPDPGYLAQKVRIEIADFITKRFA-ADGFLPVVVVSPTVESLMREGMRNTEEgnfliLEPSISAYIAKQAKQICGEEFRRGHDPVLIMQQDVRLAMHNILYEHGIHLPVLAYQEITPETVIYPVG-----
>UniRef50_A0AGD5(14-688:691) FlhA protein n=47 Tax=Bacillales RepID=A0AGD5_LISW6   E=1e-172 s/c=0.90 id=34% cov=95%
-------------------------LIAVSFVIALIVPLPPFVLDLVLVTILAFSVLVYMRATSIKDWNELKSFPSLLLLMGIFRVSINISTTRAILTTGDP-----GQVIKQFGNFVIGSNFVVGIVIFIILIVFQFIV-ANGSSRTAEVAARFTLDALPGKQMAIDADLNQRLITEPEAKEKRAYLNMETEFYGAMDGAGKFVKGDVLFTVLLAVVNIVFGLIVGMVQGGLSFGEAAVKYTELTIGDGIVSQIGSLLMAMSAGVIVTRVfdGSDDNVAVGIFKELMQNSIVVYTLSAMFILMGVFSPLPAIPFVGIGVVLGIIGYRTQfnlKKKEQLELEKEMELIQSETNSAEAEHNQafgaAREKFPVVVELGLNIAALVKQKMNGETAkDKVVLMRKSILQDLGIGVPGINFKDNTSFQPrGKYEIKVKGVAVASGVLKAGHLLALKTPGVMMDLDAEPTKDPIFGEDGYWILPGELEDAQMKNYQVLEPLSILITHLDVVLRKNLHELLMRQQIKDLIDGLADENQILIDEIKKKEIDYSLIQGVLRQLLKEGISVRDLPTIVEGIIDGQTIYpNDLDGITAFVRERISKVICEQAKNQDGKIYALLLQDSIEmdTEIVNTPYYGYALNWALDKELpiIQKVRDTVNKAQLTGREPVILTRRkDFRFGFVRVLERYQLDVPVLSISELSPETEVEQIALI---
>UniRef50_B3Q2A2(2-630:643) Type III secretory system protein n=3 Tax=Rhizobium etli RepID=B3Q2A2_RHIE6  E=1e-158 s/c=0.89 id=33% cov=88%
------------------------AVFFASVVTMLVLPLPTIVLDVLIAFNLSFAFVVLITTTYLKSVLEISTFPAVILIGTLFRLALTISSTRLVLAD-----ADAGEIIMAFGDFVVAGNVVVGLIIFLIVALVQFIVVTKGAERIAEVGARFTLDAMPGKQLAIDSDLRNGHITTEAAQKRRSRLEQESQFFGAMDGAMRFVKGDAVAGLVIVAVNLIGGLAIGIFQKGLSFAEAAHLYTLLSIGDGLVSQIPSILMAVSAGIVVTRVSDDGNgsLGSDIGRELFREPRALAIAAALTICAGFVPGFPTGVLGAIGLCLAGLAFMVHRR-RAGPAAAGSANAVESANS--YPLDRTKYGDPVIATVAVETLARLEAMRLGEMLDgRIRMA----ARAVGVSVTVPTFNADPRMAEDLIHLQVENVPAGLVSCGPERT-----------------------------------------------AEQIADDIVRIVRRHIGALFSVDDAAQWLGSLEPRLGKLAIDVA-TQVPLMLTVAVVRRLLDSGVTLSQPRGLLEVML-HAGTDHAPDALAEMARAALVKQIAFGLLDRRGLLPALVLPAEWDHFIRSYDAAGATEKIEIAERlrlLAEKARQALEDANERGYDPIIIVPGEWRLLTQTLMIHHNCRIPVLAAEEIDRDITIETIGEIG--
>UniRef50_Q1NCU5(18-637:654) Putative type III secretion pore protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NCU5_9SPHN  E=1e-154 s/c=0.88 id=33% cov=87%
-------------------------VAVVAIVALLILPLPAIMIDMLVATNIAIGLLLLLSTLHITKPLDFSTFPTVLLLSTLFRLSLSIATTRMILT-----TAEGGHIIQQFGEMVAGGNLIVGLVVFLIVTVVQFIVISKGAERVAEVAARFSLDAMPGKQLSIDSDLRSGLIGKDEARERRRTLELESKLHGSLDGAMKFVKGDAIASIVIVLINLVGGLAVGVFSHGMEAGEAMQVFSILTIGDGLVAQIPALFSAMAAGLLVTRTTDEsrdGSLGPAIVQQIGSKPKVLAPAAILCLLMALIPGFPAAVFIGIAFALGSAAAWQHPVSHAwimGKAARFDKGEKPLPQTLAAQPEAPRPVRPLVLEIAAPALDAAQAER---LRARFVLVIEAVQARLGLPMPAGEVTTRL---------------LPEGERPRWTLSAYEAPVGSGEVDGPF-------------------------------EEAIAPAIEALLRRNAARFLGLQETTTMLNRMGADYPDLVKEVV-RAVSSPRIAEVLRLLAEEEVCLRNLRDVLEAIAEIGQSERNAVPIADRTRVALRRYIAAPHM-ADGRFPVLVVGGRLERFFRDNLQTVEgvahlAMPPDQARTLIGMIRSETAKCGAR----AIITAYDLRRPLRQLTAGDLFGLPILCYNELTPALPLDVVGTL---
>UniRef50_A2P9C5(4-625:628) VcsV2 n=6 Tax=Vibrio RepID=A2P9C5_VIBCH   E=1e-129 s/c=0.75 id=29% cov=86%
--------------------------------TIILVTLPGVVIDFFLLISFVSSALLLIIMLENDQPLKVTFLPTMVLLLTTFRLLLSIATTRNIIAN-----EDVGRVIETIGEFVMGGNLISGLLIFVIITIVQFLVVTKGGERVAEVGARFSLDALPGKQMTIDGDLKSGLISGEQAQKLRADLGTENKLFGSLDGAMKFVKGDAIAGILISLVNLFGGIYVGINQFDLSLSESVKRFSVLTIGDGLVSQIPSLLLSMACGVYLTRIRGSEDESSSFMSQMMAQIRTFWKSLLVVGVVIMLIGLlnPTLMYVCLPLAVLCIVMALLLWKKNENTAVAVKVEPEGSGVFESLKFVFR-----------------DAQYQHLIKKRLKDVEaRVWGQALG--EPAVIVQPDLDVD---IAVYISGV----------QTYQFSQNSSEGIV--EILNDDVFNLHD-------------------DLSANLDEIISYFIQTRLVEKYNLQYSSNIVAELA-SQSEIMKSEIDSAVGLNRVHDVLKQMIRSPEFYLDRVSFFESLIYWSRVESDPRNWLTRIRHQARYEITARLLSNNGQIHVMLLSPE----LTEEISGYVAGEFEDFERLIEiqrALKSEIKRLIMSHHnRPVLVVNDNELNLVKTFVQQVMSTLLVCSHTDIVDNNCISSSEVI---
>UniRef50_D0I6B6(3-632:634) Type III secretion inner membrane channel protein n=9 Tax=Gammaproteobacteria RepID=D0I6B6_VIBHO  E=1e-126 s/c=0.72 id=30% cov=89%
-----AKLRL-SSLKLRKSSLLFNPSSVLIAFllpTIILVTLPGVVIDFFLMISFVSSALLLVIMLENDEPLKVTFLPTMVLLLTTFRLLLSIATTRNIIAN-----EDVGQVIETVGQFVMGGNLLSGLLIFIIITIVQFLVVTKGGERVAEVGARFSLDALPGKQMTIDGDLKSGLITGEQAQKLRADLGTENKLFGSLDGAMKFVKGDAIAGILISLVNLFGGIYVGINQFDLSLADSVSRFSVLTVGDGLVSQIPSLLLSMACGVYLTRIKGSDDESTSFMTQLMTQIRTFWKSllVIGVIIIVLGIANPNLLYICipLAILCGGLAMWLWKKDDNEVAvssfEPKGHGLFESLKFVFRDSQ-------------YQSLVQRNVENKEKVL---------WGQALG--SPAVLVDPTLE---DDLKVYVSDIEMYSYK-----------HAEAGSVVDIQ-NDELFVASA-------------------DVASNLNNIISYFIHHRFIEKYNLQYSNNIVAGLAQ-QSEIMKSEIDSAVGLNRVHDVLKQMIRSPEFYLDRISFFEALIYWSRVESDPRNWLTRIRSQARYDITANLLNQEGKVNVVLLTPE----LTEEISGFVAGEFDDVDRLIAvqtGLRNEIKRlLVQYGVKPVVVVNENELNVVKAFFQQVMSTVIVCSHADIVNSNCIENSETI---
>UniRef50_D1ZYL5(1-161:168) Whole genome shotgun sequence assembly, contig_4154 (Fragment) n=1 Tax=Sordaria macrospora RepID=D1ZYL5_SORMA  E=1e-26 s/c=0.77 id=33% cov=23%
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEWSEALGHFTLLTIGDGIATQLPALIISIATGIIVTRSASDRELSTEVFRQLGSVPRIPLIVAAVLAALLLLPGMPKWPIVVIGTIAFVAWRRIRKAAAEAAAEPVDEEVAAESTASP----------PLEIRLGEALSG-AWAGEGALVMDRIAGLRRVHEEQFGLPFPP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_A1V9R4(15-700:703) Flagellar biosynthesis protein FlhA n=11 Tax=Deltaproteobacteria RepID=A1V9R4_DESVV  E=0 s/c=1.14 id=45% cov=96%
--------------------------GVVTILFVMLVPLPTFFLDILLCCSISLSLVILVTSMFMMSPLEFSIFPSLLLVTTLLRLALNVASTRLILLHGDEGTDAAGEVIRAFGEFVVGGSYVIGAVIFMILFILNKNVITAGTTRIAEVAARFTLDAMPGKQMAIEADLNAGLIDETEANERRKNIRKEADFYGAMDGAGKFVSGDVNAGMFITLINIIGGLLVGIIQKDMPWRDALTTYTLLTVGDGLVSTIPSIIVSTAAGIIVSRAASEAKMGEEFLGQLTYNSRAMRLVSGVLLLFALVPGLPTVPFLIFSASLFFFAKLLGDRDGDEAQGDAKRAGGKAAKGKGDSLDTpeevqaLLPLDALELEVGYGLIPLVDEEQNGNLLTRIRSIRRQFALDMGVVIPSLHLRDNLQLKPGQYALLIKGNQVASAEILIDHLLAMDPGTARHRIQGIETREPAFNLPALWIPESQKEEAMLAGYTVVDPSTVIATHLTEVFRRHLSEFLGRQEVQGLLDNLSKHAPKAVEELVPGVLSLGVVQKVLQNLVRENVSVRDLLSVVETLADYGPAIKNPDTLTEYVRERLARSIVKPHMDSEGTLPIITLDANVERTLQDSIRQTEggaylALNPSTAQRLIQSVNTQVENAVGTDGQPVVLTQPGTRPHLAQLLMRFLPNIPVLSQAEIPPDIRLQAVGNV---
>UniRef50_C4ZAM7(3-678:680) Flagellar biosynthesis protein A n=4 Tax=Clostridia RepID=C4ZAM7_EUBR3  E=0 s/c=1.15 id=38% cov=96%
---------------------LGVGLYLLCAVLFFIIPIPSFLLDVMLAFNLSIALIILFKVLFVKEVLDMSFFPTLLLFTTIFRISLNVSSTRLILSTGNP-----GVVVNVFGQFVGGGNLVIGAIVFIVLIIIQFVVINKGSERVAEVTARFTLDAMPGKQMAIDADLNTGAITDKEAKARRDKIQKESSFYGAMDGATKYVKGDAAAGIIITLINLVGGTIMGVMFQGLDVNEAIQKFGLLTIGDGLVSQIPSLLISLSTGILVTKGSNENDFSGELLGQLFGTAKVLYIVSIVLVVLGILTPLRNewWLFIGLAVAFFVTGKNLDKKAGIESIEDETAQAESDAEEIRKPENVVslLQVDPIELEFGYGIIPLADVNQGGDLLDRVVMIRRQIALELGTVVPIIRLRDNIQLNPNQYIIKIKGIQVTEGEILFDHYMAMNPGYVEEEITGIPTFEPSFHLPAIWITESQRERAESLGYTVVDPPSIIATHLTEVIRSHIAELLTRQDVQNLVNNLKESNPVIVDELIPKLLGLGEIQKVLQNLLSEGISIRDLLTIFETLADHAQTTRDTDVLTEYVRQGLKRAISSKYFPANETTSVITLDPAVEQEIMSSVKQTEqgsylSLDPDRIKAIIKSVETEIGKLESLGKSAIIITSPIVRMYFKKMTEDYFKDLIVLSYNEVESNVELQSVGMV---
>UniRef50_Q21IQ2(51-746:755) Flagellar biosynthesis protein FlhA n=16 Tax=Gammaproteobacteria RepID=Q21IQ2_SACD2  E=0 s/c=1.09 id=54% cov=94%
---------------------------------------PAFLLDAFFSFNIALSIVVLLVAVYSLRPLDFAVFPTILLIATLLRLALNVASTRVVLLEGHQGGDAAGKVIQAFGEVVIGGNYAVGLVVFIILIIINFVVVTKGAGRISEVSARFTLDAMPGKQMAIDADLNAGIIDQDEARTRREDVASEADFYGAMDGASKFVRGDSVAGILILIINICGGLLVGMVQHQLEFSDALEKYVLLTIGDGLVAQIPSLLLSVAAAIMVTRVNSSEDMNRQVLSQMFESPKALAVAGCIIFIMGAIPGMPHFPFITLAIICGILAYYIHFRSQEAEVVEvgnargftqsspsgqtgaqpsmpagnmpaienqsarQGNPPPQSSEPTEVSWDDVTPVDLVGLEVGYRLIPLVDKGQGGELLGRIKGVRKKLSQDLGFLIPAVHIRDNLDLLPSGYRITLMGVSIGEGEVFPDKFLAINPGQVFGSLQGTKTKDPAFGLEAIWIDEAQREQAQTLGYTVVDPSTVVATHLNQIIQTHTHELLGHEEVQKWLDLLGEKSPKLVEELVPETLSINQLLKTLQGLLREQVPIRDMRTIAEALAAHGNKSMDTTALTSIARVSLARQIVQNIVGQDPNLPVITLDPSLEQLLLQSVQQaqkagasdGAFIEPQLAERLNKSLVETAKKQEMAGRPIVLLVAAPIRPMMAQFVRYHISEMHVIAYNEVPDNKQITIEATIG--
>UniRef50_C1SNG5(13-692:696) Flagellar biosynthesis protein FlhA n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SNG5_9BACT  E=0 s/c=1.10 id=45% cov=96%
------------------------SIFFIGIIVVMVLPLPAFLLDILLTMSIALAIVILMVAIHSDDPLNFSTFPSVLLIVTLFRLSLNVATTRTILLHGAEGEEAAGQVIRSFGQFVVGGNYVVGIIIFLILVLINFMVITKGSGRIAEVAARFTLDAMPGKQMAIDADLNTGLITEDEAKAKREKIQKEADYYGAMDGASKFVRGDAIAGIIITAINILGGLLIGVFQHDMPAGESAARFTILTIGDGLVSQIPSLIISTSAGLIVSRAGGSADLSGQLFTQLFSSTKVLGIAGAILLFFALVPGLPKISFISIAALMFYLVYIskgKKNELEKKEKEEATKEKEHKDVPEEEEVKNLLEMDLMELEIGFGLIPLVDTNQGGTLLSRIKAIRRQIALEMGFIVPPVRIRDNLQLDANGYSVMLKSVRVATGTIFPEKYLIMNPEGDITKIDGIPTKEPAFGLEAKWVDEPVKDIAEMEGYTIVDPSTVIATHLTEIIKKNAHELLGRQETQELLDKLKEKYPKLVDDVIPSILDLGTVNRVLQSLLKERVSIRNLQTVMEVLATFGMQNKNPDYLIEKVRLTLKRQITEAMTSADGSLYVFTLPSKIEQMLASSLQNTDDgqeivIDPTLAQKILSGIMKKTEECVSKGLPPLMIISPPIRLPMRRFVEKFVPNVNIMSHNEISESVRIESLG-----
>UniRef50_Q89AN5(1-697:702) Flagellar biosynthesis protein flhA n=2 Tax=Enterobacteriaceae RepID=FLHA_BUCBP  E=0 s/c=1.07 id=59% cov=100%
MANILSIFKTFEIKRLVKFQTLSGPVLILIILSMMVLPLAPFILDLFFTFNIALSIVVLLMSMFTTKTLEFTSFPTILLFSTLLRLALNIASTRIILLNGHIGSCSAGNVIQAFGHFLVGGNFTIGIIVFIILIIINFMVITKGASRIAEVGARFTLDGMPGKQMAIDADLNAGLIGEKQAKKRRIEINQEADFYGSMDGASKFVRGDAIAGILIMIVNIIGGLVIGILQHNMTFSQAAQVYTILTIGDGLVAQIPALVVSTASGVIVTRVSTDQNVSEQIVSQLFCNPQVILLSGIVLGVLGLVPGMPNIIFLIFTTLLFFISWLIYRNPVIFTNFESTMKKIDNTnfcNISDASWNDVQLEGSISIELGNLLIPMIKVNsKKSNLLDKIRNVRKKCAKNIGFLPPLVHIRDNNNLPGNCYCILIKGIEISKGTVQCGKFLAINSGNASGplPLPAEETSDPIFKFKSFWITSELINQAKQKGYNIAEDSTVISTHLNHIILTHISLLFGRQEAQQLLDYVSKFCPKLIEDLIPNSINLTIFHQVLQNLLIENVPIRDMQTILETLITHAPNYQnDSQILTSLVRISLGKLIIQNIF-QNNKIEVIKFDSKLEQILLKTIANKDSvLEPGLYNYIVVKLQQEYNNCKLKNIPCVLLVHHNLRVFIAKMLLKNIPKIFVLSNLELEDVTKIYTTNIIG--
>UniRef50_Q1Q6S4(22-693:695) Strong similarity to flagellar biosynthesis protein FlhA n=2 Tax=Bacteria RepID=Q1Q6S4_9BACT  E=0 s/c=1.10 id=43% cov=95%
-------------------------IGVISIFIVLIIPVPPFIIDLLVTTNISLVLLLLLVSLHIKGALDLSSFPSILLFMTLFRLALNVASTRQILLQGY-----GGKVIGAFGDFVVGGNMLVGLVVFLIIVVIQFIVITKGATRIGEVAARFTLDAMPGKQMSIDADLNAGLITEKEARERREKLSREAEFYGAMDGAGKFVSGDAVAGIIIVLINIIGGIVMGM-RSGMSVSEAMQHYTLLTVGDGLVSQIPSFIIATASAVIVTKTSaTGENLGTDVTGQLFSQPNAIAFAGGILTLFSIVPGLPKIPFLVLAGFFWMMFFVLRRSSKETELAEALVKETEGmarEPKKEESVEGMLRVDRMELEVGYKLVPLVDPNKNGGILERINTLRMQIAKDMGMIVPPIRVRDNLQLETNKYVVKIRGQEIAHGELLTGSYLAIDSGAVTQKVNGIETLDPAYGLPALWITDAVKEDAEALGYTVVDPASVMITHLTEIIKTHAYEILCREDVQKLLETVKKDYPTIVEELAPNIISLGSIQEILKNLLKEQVPIRDLSSILETIADYAPATKDIEQLTEYVRQRLSRTICKRYQNTEGKIGVISFDPHLEQTIANAIHKTEkgnllALDPNMAHKVIDKLAEIVRGSLTSGYEVVLLTSSSVRSHVRRLIENALPQLAVLSYKEISPGVMIDSVGVV---
>UniRef50_A6Q2M0(31-689:695) Flagellar biosynthesis protein FlhA n=6 Tax=Bacteria RepID=A6Q2M0_NITSB  E=0 s/c=1.12 id=44% cov=95%
----------------------------------MILPVPPFFLDLLLTASITFSLVILMTTVYVGNPLEIASFPSLLLLATLFRLALNIATTRRILLHGHEGPEAAGKLIESFGQFVVGGNYIVGIIIFVILVTINFIVVTKGTERISEVGARFTLDAMPGKQMAIDADLNAGLIDEQEARRRREAIAKEADFYGAMDGASKFIRGDAIAGIIITTINIIGGIAIGVLQHGMDLSTAAANFTLLTVGDGLVSQIPSLITSTAAGLMVTRAVSETNLGKEIFSQLTSYPKALYMTAGALFVIGTVPGMPFIPFTILAGMIALTAYMMQLemKRETIEKEEEEVKEILQQQVEESEEEYITQPETITFEIGYGLIPLVDEEKGGELLKRIKSLRKQLSKELGLMVPLIHIKDNLELKSGEYRILLKGVEVARYQIEPGKMLAIDTGQTNGKLEGVETTEPTFGLKAYWIDESQKDKARMLGFTVVDIPTVIITHLSEIIKQNAHEILGRSETKELVDKLGQKYP-IVKEIVPEQVPYAILHRVLQNLLREHIPIKDLLTIIESLSDNITKTEDTDILTELVRESLARLITSIYA-KDGVLYALTLDPASEEKLYAKIKEYNGnlppIDPAKLQSFIMQISKNMEKFVIEQRTPVLLTSPNVRRYVYKIIEPYMSNVAVLSYNEVDPKTKLKIIDKV---
>UniRef50_Q2SEX4(8-679:697) Flagellar biosynthesis pathway, component FlhA n=4 Tax=cellular organisms RepID=Q2SEX4_HAHCH  E=0 s/c=1.03 id=38% cov=97%
-----------ASLLGTRSE-LALVLGMVGILLVLFTPIPSQLLDVLLIINFSFGLLILLLTFFVDKPLGFSTFPSLLLIATLFRLSLNIAATRLILSDGD-----AGEVINAIGTYVVGGNYVIGLVVFLILIVVQYVVVTNGAQRVAEVAARFTLDSMPGKQMSIDADMNMGLIDEKEARERRQNIEREASFYGAMDGASKFVKGDAIAGILIILIDIIGGLTVGIAQRGLSWGEALHSYTLLTVGDGIVTQIPALVISTATGIIITRAATDAFLGDEISRQVTRYPKSLVIVTLGLLSLLLLPGIPALPIFIVASLMAALVVYAFKQNKYQEAEDNVEDQED----AEKDIYEELKVEPLEISLGPSIAGYLGAS-EGALMDEIKRLRKQLALELGFVLPNVKIYQTDRNSEREYKVCVHGAQVAEGELYSDRILAISAQDLTDKLPGVSVKDPTYGLPAVWIEENLKEKARQFNCTLVDPLTVMLTHVNETVRLQAPALLTRSETEKLMGRVRTAQSSLYEELVPNTLTLSDIQKVLQQLLQEKVSIRNIELIAEALVDAGKVSKDHEQLADQVRQKLGAEICQDLVAQDRYLHVMSMDPGIEQLMQSGIRVTEQgaslyVDPKLTEQVLSSLARQVEKMMAVGLKPVLITSPGVRRHIRKLSGRLLPHLTVLALTEVPVGMNIKSFSIV---
>UniRef50_C0QXX5(11-702:703) Flagellar biosynthesis protein A n=2 Tax=Brachyspira RepID=C0QXX5_BRAHW  E=0 s/c=0.94 id=36% cov=98%
-------IKLPANL--SRHSDIMFAIGAVMVIMMLIIPLPSLILDFLLIINIIVSLLILLMVLSIRSANDFSVFPSVLLVMTAFRLALNVSTTRAILTEG---ANFGGKVITSFADFVVGGNIVVGVVIFIILIIVQFVVITKGATRVSEVAARFALDSMPSKMMAVESELQAGAITDKEAEEKRKKIRGESDFYGTMDGASKFVQGDVIAGIIITVINIVGGLVIGMTMRGEPFTQAVNAYTRFTVGDGLVSQIPSFFMSFATGLLVTRSSSEDNLSTQIAVQVFAKPKNLFIGAGFAFFLMLLPGFPKIALFIIALALFLAGYALKKEQQELGLNEDGTKTDAGEQVHQGPLDVTPFlkVEKIELSVGASLIPLALESEGGDLINRISQIRRELALEVGLVVPPVRIVDNSVIEPDEYTVSINGTEMAKGFVRPNMLLALNANSPDGPSPdCEKVREPAFGLPAYWIKVDEKDMAEKKGFMLFQPTSVIATHFSETIKRNANLLIGREEVQNMLDLIKDDHKALVSEVLAAKphneSPLGYIQKVLQNLLQEEVPIRNSVAILEGVADAIAIMGS-EQATELVRSRLASQISQMVADQDRNIRVITLSQQLQNNIAQNLANTGNLqgsqmiamSFESMQNLIKNIKDAVKLVSDSGVdDIVFLTSPIIRRPLYQFIAKNVGKYKVIATTEIAQGYNVQGIASI---
>UniRef50_A6GN34(5-688:705) Type III secretion protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GN34_9BURK  E=0 s/c=0.95 id=33% cov=96%
-----------ARLASARSEVVGASLIILMIV-MMVIPMGPGILDVLLAINISVSVVLVISAVLIETPLAFSSFPALLLMTTLFRLSLTISTTRQILLEGD-----AGHIVQTFGEFVVGGNVAVGLTIFLIISVVNFLVITKGSERVAEVAARFSLDGMPGKQMSIDSDLRAGLITQAVAKQRRSDLEKESQLFGAMDGAIKFVKNDAIAGLVITVVNLLGGLTVGMMQKGMSFSEAGSVYTILSVGDGLVAIIPSLMVSIAAGLIVTRVtkgeADGSNTAQDMLKDLSRNSNALQISGIFCFLFAFVPGMPSYVFLATSATLLCGWYFISRKTDKAEEVDVSTQFSDmlSASGKSIKMDDILHTNTFA-PLEVRLPVDIEPTAANQIQNICRIARNRRVEQLGILFPLFEFINHTESFVEFY---VYGVPAMSIHISEKRLSIRSDQSLVQAVPGIEfviEKDVVTGKYDMLCDPLQKTLLDQHKLEYLTFETRLVSQIEALLVQKVDQLFTLNEYQRHMTTLGDKYTEQLKEL-ERVLPVTKVVEVLQRLLGESVSIKNMRSILNSLIEWGQRERDPMVIAEQVRRGLFEQICHQHT-HERKLKVFMLGVEFEQLIRESSRSDGNgsfvdIDSSSLNELIEIVEEQCRPHLVGNYVPAIVCSMDCRVFFRQIIQDSLFIIPVLSHQEISSNMEIQVLGNI---
>UniRef50_Q8GAT5(1-340:340) Invasion protein (Fragment) n=1 Tax=primary endosymbiont of Sitophilus zeamais RepID=Q8GAT5_9ENTR  E=1e-71 s/c=0.80 id=30% cov=48%
--------------------------------------------------------------------------------------------------------------------------------------------------------------------MSIDADLKAGVLDEDGVKKRREVLEAESQLYGALDGAMKFIKGDAIAGIIIIFVNLIGGISVGMVQHGMELSEALTVYTHLSIGDALVAQIPALLISISGGFIVTRVnnNKNNNLGSKIITDLFANQSTLMVTACLALAMGFLPGFPLPVFMVLSALLIAIYFKDKWRNRHKNKSGESHREKGADDEAQSEAvtidgDIIPETLPLMITFNETFKPKLE---QHNLASRLK---KTFFIEYGVRLPEITIGYAPKSVCASMNIAINEIPVADYMLIPGMHKILINGEELKMLDNSVESINTPQGVSYWLPEEKADNAHKMGYITRSAIDEFYFCISTLLTHNISEF---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_O52255(8-220:223) FlhA (Fragment) n=1 Tax=Pseudomonas putida RepID=O52255_PSEPU   E=8e-41 s/c=0.80 id=45% cov=28%
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LDELVACHECDLLLRKPV---LQVLSKASPKLAEELVPGVISLSGLLKVLQALLSEQVPVRDIRSIAEAIANNAGKSQDTAALVAVVRVGLCRAIVQSIVGVESELPVITLEPRLEQILLNSLQRAGQgqedgvlLEPSMAEKLQPSLIEAAQRQEMQGQPAILLVAGPIRAMLSRFGRLAVPNLHVLAYQEIPDNKQVTIVATVG--
