Phyre 2 alignment of P76298 with c2pw0A_

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Job Description | P76298
Confidence | 8.60% | Date | Thu Jan 5 12:21:40 GMT 2012
Rank | 93 | Aligned Residues | 38
% Identity | 24% | Template | c2pw0A_
PDB info | PDB header:unknown function | Chain: A: PDB Molecule:prpf methylaconitate isomerase; | PDBTitle: crystal structure of trans-aconitate bound to methylaconitate2 isomerase prpf from shewanella oneidensis
Resolution | 1.57 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 368 | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
Query Sequence |  | G | Y | R | L | I | P | M | V | D | F | Q | Q | D | G | E | L | L | G | R | I | R | S | I | R | K | K | F | A | Q | E | M | G | F | . | . | . | . | . | . | . | . | . | . | . | L | P | P | V | V | H | I
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | T | E | L | Q | D | D | I | N | S | D | N | A | . | . | A | L | A | K | F | E | T | I | R | A | H | G | A | L | R | M | G | L | I | K | H | I | D | E | A | A | S | R | Q | H | T | P | K | I | A | F
Template Known Secondary structure |  | S |  |  |  |  |  |  |  | T | T |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  | S | S | G | G | G | G | G | G |  |  | S | S | S |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 236 | . | . | . | 240 | . | . | . | . | . | . | . | . |  |  | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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