Phyre 2 alignment of P76298 with c2q2kA_

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Job Description | P76298
Confidence | 20.08% | Date | Thu Jan 5 12:21:40 GMT 2012
Rank | 22 | Aligned Residues | 29
% Identity | 34% | Template | c2q2kA_
PDB info | PDB header:dna binding protein/dna | Chain: A: PDB Molecule:hypothetical protein; | PDBTitle: structure of nucleic-acid binding protein
Resolution | 3.00 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 553 | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | D | M | R | T | I | L | E | T | L | A | E | H | A | P | I | Q | S | D | P | H | E | L | T | A | V | V | R | V | A | L | G | R | A | I
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | D | Y | P | Q | I | F | D | F | L | E | N | V | P | R | G | T | K | . | . | . | . | . | T | A | H | I | R | E | A | L | R | R | Y | I
Template Known Secondary structure |  | T | S |  |  |  |  |  |  |  | T | T | S |  | T | T |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . |  |  |  |  |  | . | . | . | . | . | . | . | 40 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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