Emaill.a.kelley@imperial.ac.uk
DescriptionP45800
DateWed Jan 25 15:20:55 GMT 2012
Unique Job IDc4f2eb709e6db4f5

Detailed template information 

#Template Alignment Coverage3D Model Confidence% i.d. Template Information
1d1jmxa1



55.4 12 Fold:Cytochrome c
Superfamily:Cytochrome c
Family:Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2
2c1eboE_



51.9 13 PDB header:viral protein
Chain: E: PDB Molecule:ebola virus envelope protein chimera consisting
PDBTitle: crystal structure of the ebola virus membrane-fusion2 subunit, gp2, from the envelope glycoprotein ectodomain
3d1pbya1



51.6 24 Fold:Cytochrome c
Superfamily:Cytochrome c
Family:Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2
4c3ifqD_



50.0 28 PDB header:cell adhesion
Chain: D: PDB Molecule:e-cadherin;
PDBTitle: interction of plakoglobin and beta-catenin with desmosomal2 cadherins
5d2q09a1



43.3 89 Fold:Composite domain of metallo-dependent hydrolases
Superfamily:Composite domain of metallo-dependent hydrolases
Family:Imidazolonepropionase-like
6c3k5bE_



42.0 19 PDB header:hydrolase
Chain: E: PDB Molecule:v-type atp synthase subunit e;
PDBTitle: crystal structure of the peripheral stalk of thermus thermophilus h+-2 atpase/synthase
7c2jo1A_



41.8 28 PDB header:hydrolase regulator
Chain: A: PDB Molecule:phospholemman;
PDBTitle: structure of the na,k-atpase regulatory protein fxyd1 in2 micelles
8d2isba1



31.2 18 Fold:The "swivelling" beta/beta/alpha domain
Superfamily:FumA C-terminal domain-like
Family:FumA C-terminal domain-like
9c3mk7F_



31.0 17 PDB header:oxidoreductase
Chain: F: PDB Molecule:cytochrome c oxidase, cbb3-type, subunit p;
PDBTitle: the structure of cbb3 cytochrome oxidase
10d1y0na_



28.2 30 Fold:YehU-like
Superfamily:YehU-like
Family:YehU-like
11c3c6eC_



24.2 33 PDB header:viral protein
Chain: C: PDB Molecule:prm;
PDBTitle: crystal structure of the precursor membrane protein- envelope protein2 heterodimer from the dengue 2 virus at neutral ph
12c3c6rE_



24.1 33 PDB header:virus
Chain: E: PDB Molecule:peptide pr;
PDBTitle: low ph immature dengue virus
13d1ny722



23.1 16 Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins)
Superfamily:Positive stranded ssRNA viruses
Family:Comoviridae-like VP
14d1pgl22



23.1 24 Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins)
Superfamily:Positive stranded ssRNA viruses
Family:Comoviridae-like VP
15c3rfrI_



22.7 24 PDB header:oxidoreductase
Chain: I: PDB Molecule:pmob;
PDBTitle: crystal structure of particulate methane monooxygenase (pmmo) from2 methylocystis sp. strain m
16c3i24B_



21.7 19 PDB header:hydrolase
Chain: B: PDB Molecule:hit family hydrolase;
PDBTitle: crystal structure of a hit family hydrolase protein from2 vibrio fischeri. northeast structural genomics consortium3 target id vfr176
17d1v54k_



21.6 17 Fold:Single transmembrane helix
Superfamily:Mitochondrial cytochrome c oxidase subunit VIIb
Family:Mitochondrial cytochrome c oxidase subunit VIIb
18c2y69X_



21.6 17 PDB header:electron transport
Chain: X: PDB Molecule:cytochrome c oxidase polypeptide 7b;
PDBTitle: bovine heart cytochrome c oxidase re-refined with molecular2 oxygen
19c3nohA_



20.2 26 PDB header:peptide binding protein
Chain: A: PDB Molecule:putative peptide binding protein;
PDBTitle: crystal structure of a putative peptide binding protein (rumgna_00914)2 from ruminococcus gnavus atcc 29149 at 1.60 a resolution
20c2bpbB_



19.4 18 PDB header:oxidoreductase
Chain: B: PDB Molecule:sulfite\:cytochrome c oxidoreductase subunit b;
PDBTitle: sulfite dehydrogenase from starkeya novella
21d1u61a_



not modelled 18.9 24 Fold:RNase III domain-like
Superfamily:RNase III domain-like
Family:RNase III catalytic domain-like
22c3heiF_



not modelled 18.6 25 PDB header:transferase/signaling protein
Chain: F: PDB Molecule:ephrin-a1;
PDBTitle: ligand recognition by a-class eph receptors: crystal structures of the2 epha2 ligand-binding domain and the epha2/ephrin-a1 complex
23d1dgsa2



not modelled 18.5 17 Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:DNA ligase/mRNA capping enzyme postcatalytic domain
24c3ikmD_



not modelled 17.6 26 PDB header:transferase
Chain: D: PDB Molecule:dna polymerase subunit gamma-1;
PDBTitle: crystal structure of human mitochondrial dna polymerase2 holoenzyme
25c2q04C_



not modelled 17.2 19 PDB header:transferase
Chain: C: PDB Molecule:acetoin utilization protein;
PDBTitle: crystal structure of acetoin utilization protein (zp_00540088.1) from2 exiguobacterium sibiricum 255-15 at 2.33 a resolution
26c2x11B_



not modelled 16.7 25 PDB header:receptor/signaling protein
Chain: B: PDB Molecule:ephrin-a5;
PDBTitle: crystal structure of the complete epha2 ectodomain in2 complex with ephrin a5 receptor binding domain
27d1shxa1



not modelled 16.7 25 Fold:Cupredoxin-like
Superfamily:Cupredoxins
Family:Ephrin ectodomain
28d2o6ka1



not modelled 16.7 19 Fold:SAM domain-like
Superfamily:YozE-like
Family:YozE-like
29c3czuB_



not modelled 16.6 25 PDB header:transferase/signaling protein
Chain: B: PDB Molecule:ephrin-a1;
PDBTitle: crystal structure of the human ephrin a2- ephrin a1 complex
30c2wo3B_



not modelled 16.5 25 PDB header:transferase/signaling protein
Chain: B: PDB Molecule:ephrin-a2;
PDBTitle: crystal structure of the epha4-ephrina2 complex
31d2j5wa3



not modelled 16.3 20 Fold:Cupredoxin-like
Superfamily:Cupredoxins
Family:Multidomain cupredoxins
32d1ngka_



not modelled 15.9 26 Fold:Globin-like
Superfamily:Globin-like
Family:Truncated hemoglobin
33d1v33a_



not modelled 15.8 19 Fold:Prim-pol domain
Superfamily:Prim-pol domain
Family:PriA-like
34d2cqaa1



not modelled 15.7 28 Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:TIP49 domain
35c3uowB_



not modelled 15.5 19 PDB header:ligase
Chain: B: PDB Molecule:gmp synthetase;
PDBTitle: crystal structure of pf10_0123, a gmp synthetase from plasmodium2 falciparum
36d2ctda1



not modelled 14.6 14 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
37d1g71a_



not modelled 14.0 15 Fold:Prim-pol domain
Superfamily:Prim-pol domain
Family:PriA-like
38c3d12E_



not modelled 13.9 29 PDB header:hydrolase/membrane protein
Chain: E: PDB Molecule:ephrin-b3;
PDBTitle: crystal structures of nipah virus g attachment glycoprotein in complex2 with its receptor ephrin-b3
39d1h1oa1



not modelled 13.9 12 Fold:Cytochrome c
Superfamily:Cytochrome c
Family:Two-domain cytochrome c
40c3p87H_



not modelled 13.8 60 PDB header:hydrolase/dna binding protein
Chain: H: PDB Molecule:ribonuclease h2 subunit b;
PDBTitle: structure of human pcna bound to rnaseh2b pip box peptide
41c3p87I_



not modelled 13.8 60 PDB header:hydrolase/dna binding protein
Chain: I: PDB Molecule:ribonuclease h2 subunit b;
PDBTitle: structure of human pcna bound to rnaseh2b pip box peptide
42c3p87K_



not modelled 13.8 60 PDB header:hydrolase/dna binding protein
Chain: K: PDB Molecule:ribonuclease h2 subunit b;
PDBTitle: structure of human pcna bound to rnaseh2b pip box peptide
43c3p87G_



not modelled 13.4 60 PDB header:hydrolase/dna binding protein
Chain: G: PDB Molecule:ribonuclease h2 subunit b;
PDBTitle: structure of human pcna bound to rnaseh2b pip box peptide
44c3p87J_



not modelled 13.4 60 PDB header:hydrolase/dna binding protein
Chain: J: PDB Molecule:ribonuclease h2 subunit b;
PDBTitle: structure of human pcna bound to rnaseh2b pip box peptide
45c3p87L_



not modelled 13.4 60 PDB header:hydrolase/dna binding protein
Chain: L: PDB Molecule:ribonuclease h2 subunit b;
PDBTitle: structure of human pcna bound to rnaseh2b pip box peptide
46d2nwua1



not modelled 13.3 12 Fold:RL5-like
Superfamily:RL5-like
Family:SSO1042-like
47d1zsoa1



not modelled 13.1 25 Fold:MAL13P1.257-like
Superfamily:MAL13P1.257-like
Family:MAL13P1.257-like
48c2p2vA_



not modelled 13.0 19 PDB header:transferase
Chain: A: PDB Molecule:alpha-2,3-sialyltransferase;
PDBTitle: crystal structure analysis of monofunctional alpha-2,3-2 sialyltransferase cst-i from campylobacter jejuni
49c3ktbD_



not modelled 12.1 10 PDB header:transcription regulator
Chain: D: PDB Molecule:arsenical resistance operon trans-acting repressor;
PDBTitle: crystal structure of arsenical resistance operon trans-acting2 repressor from bacteroides vulgatus atcc 8482
50c3pdsA_



not modelled 12.0 14 PDB header:membrane protein/hydrolase
Chain: A: PDB Molecule:fusion protein beta-2 adrenergic receptor/lysozyme;
PDBTitle: irreversible agonist-beta2 adrenoceptor complex
51c3kgkA_



not modelled 12.0 29 PDB header:chaperone
Chain: A: PDB Molecule:arsenical resistance operon trans-acting repressor arsd;
PDBTitle: crystal structure of arsd
52d1ikop_



not modelled 11.9 47 Fold:Cupredoxin-like
Superfamily:Cupredoxins
Family:Ephrin ectodomain
53c1ikoP_



not modelled 11.9 47 PDB header:signaling protein
Chain: P: PDB Molecule:ephrin-b2;
PDBTitle: crystal structure of the murine ephrin-b2 ectodomain
54c2f8mB_



not modelled 11.5 13 PDB header:isomerase
Chain: B: PDB Molecule:ribose 5-phosphate isomerase;
PDBTitle: ribose 5-phosphate isomerase from plasmodium falciparum
55d1v38a_



not modelled 11.4 30 Fold:SAM domain-like
Superfamily:SAM/Pointed domain
Family:SAM (sterile alpha motif) domain
56c2j5dA_



not modelled 11.4 40 PDB header:membrane protein
Chain: A: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting
PDBTitle: nmr structure of bnip3 transmembrane domain in lipid2 bicelles
57d1o0la_



not modelled 11.4 17 Fold:Toxins' membrane translocation domains
Superfamily:Bcl-2 inhibitors of programmed cell death
Family:Bcl-2 inhibitors of programmed cell death
58c2w2hD_



not modelled 11.3 23 PDB header:rna-binding protein
Chain: D: PDB Molecule:protein tat;
PDBTitle: structural basis of transcription activation by the cyclin2 t1-tat-tar rna complex from eiav
59c2fl8N_



not modelled 11.3 23 PDB header:virus/viral protein
Chain: N: PDB Molecule:baseplate structural protein gp10;
PDBTitle: fitting of the gp10 trimer structure into the cryoem map of the2 bacteriophage t4 baseplate in the hexagonal conformation.
60c3lgoA_



not modelled 11.2 19 PDB header:protein binding
Chain: A: PDB Molecule:protein slm4;
PDBTitle: structure of gse1p, member of the gse/ego complex
61c2lmaA_



not modelled 11.0 38 PDB header:immune system
Chain: A: PDB Molecule:thp5 peptide;
PDBTitle: solution structure of cd4+ t cell derived peptide thp5
62c2jwaA_



not modelled 10.9 18 PDB header:transferase
Chain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-2;
PDBTitle: erbb2 transmembrane segment dimer spatial structure
63d1fcdc1



not modelled 10.7 5 Fold:Cytochrome c
Superfamily:Cytochrome c
Family:Two-domain cytochrome c
64d2fj6a1



not modelled 10.5 25 Fold:SAM domain-like
Superfamily:YozE-like
Family:YozE-like
65d1lira_



not modelled 10.5 30 Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:Scorpion toxin-like
Family:Short-chain scorpion toxins
66c3cp5A_



not modelled 10.4 20 PDB header:electron transport
Chain: A: PDB Molecule:cytochrome c;
PDBTitle: cytochrome c from rhodothermus marinus
67d2evra2



not modelled 10.4 60 Fold:Cysteine proteinases
Superfamily:Cysteine proteinases
Family:NlpC/P60
68c3oa8A_



not modelled 10.3 19 PDB header:heme-binding protein/heme-binding protei
Chain: A: PDB Molecule:soxa;
PDBTitle: diheme soxax
69c2l4dA_



not modelled 10.3 38 PDB header:electron transport
Chain: A: PDB Molecule:sco1/senc family protein/cytochrome c;
PDBTitle: cytochrome c domain of pp3183 protein from pseudomonas putida
70d1mida_



not modelled 10.0 42 Fold:Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
Superfamily:Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
Family:Plant lipid-transfer and hydrophobic proteins
71c3ixxE_



not modelled 10.0 33 PDB header:virus
Chain: E: PDB Molecule:peptide pr;
PDBTitle: the pseudo-atomic structure of west nile immature virus in2 complex with fab fragments of the anti-fusion loop antibody3 e53
72d2bmta_



not modelled 9.8 45 Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:Scorpion toxin-like
Family:Short-chain scorpion toxins
73c1pbyA_



not modelled 9.8 21 PDB header:oxidoreductase
Chain: A: PDB Molecule:quinohemoprotein amine dehydrogenase 60 kda
PDBTitle: structure of the phenylhydrazine adduct of the2 quinohemoprotein amine dehydrogenase from paracoccus3 denitrificans at 1.7 a resolution
74c1sddA_



not modelled 9.6 11 PDB header:blood clotting
Chain: A: PDB Molecule:coagulation factor v;
PDBTitle: crystal structure of bovine factor vai
75c2vofA_



not modelled 9.6 20 PDB header:apoptosis
Chain: A: PDB Molecule:bcl-2-related protein a1;
PDBTitle: structure of mouse a1 bound to the puma bh3-domain
76c2ehwD_



not modelled 9.3 20 PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:hypothetical protein tthb059;
PDBTitle: conserved hypothetical proteim (tthb059) from thermo thermophilus hb8
77d1g3wa3



not modelled 9.3 32 Fold:SH3-like barrel
Superfamily:C-terminal domain of transcriptional repressors
Family:FeoA-like
78d1m70a2



not modelled 9.0 22 Fold:Cytochrome c
Superfamily:Cytochrome c
Family:Two-domain cytochrome c
79d1y88a1



not modelled 8.9 43 Fold:SAM domain-like
Superfamily:Rad51 N-terminal domain-like
Family:Hypothetical protein AF1548, C-terminal domain
80d1kpfa_



not modelled 8.9 17 Fold:HIT-like
Superfamily:HIT-like
Family:HIT (HINT, histidine triad) family of protein kinase-interacting proteins
81d1wejf_



not modelled 8.7 14 Fold:Cytochrome c
Superfamily:Cytochrome c
Family:monodomain cytochrome c
82c3rqrA_



not modelled 8.7 24 PDB header:metal transport
Chain: A: PDB Molecule:ryanodine receptor 1;
PDBTitle: crystal structure of the ryr domain of the rabbit ryanodine receptor
83c2ka2A_



not modelled 8.5 40 PDB header:membrane protein
Chain: A: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting
PDBTitle: solution nmr structure of bnip3 transmembrane peptide dimer2 in detergent micelles with his173-ser172 intermonomer3 hydrogen bond restraints
84c2ka1B_



not modelled 8.5 40 PDB header:membrane protein
Chain: B: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting
PDBTitle: solution nmr structure of bnip3 transmembrane peptide dimer2 in detergent micelles
85d1hlca_



not modelled 8.4 28 Fold:Concanavalin A-like lectins/glucanases
Superfamily:Concanavalin A-like lectins/glucanases
Family:Galectin (animal S-lectin)
86c2zkqg_



not modelled 8.3 19 PDB header:ribosomal protein/rna
Chain: G: PDB Molecule:rna helix;
PDBTitle: structure of a mammalian ribosomal 40s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map
87c1bmv2_



not modelled 8.1 24 PDB header:virus/rna
Chain: 2: PDB Molecule:protein (icosahedral virus - b and c domain);
PDBTitle: protein-rna interactions in an icosahedral virus at 3.02 angstroms resolution
88c2fg0B_



not modelled 8.1 60 PDB header:hydrolase
Chain: B: PDB Molecule:cog0791: cell wall-associated hydrolases (invasion-
PDBTitle: crystal structure of a putative gamma-d-glutamyl-l-diamino acid2 endopeptidase (npun_r0659) from nostoc punctiforme pcc 73102 at 1.793 a resolution
89c2axkA_



not modelled 8.1 36 PDB header:toxin
Chain: A: PDB Molecule:discrepin;
PDBTitle: solution structure of discrepin, a scorpion venom toxin2 blocking k+ channels.
90c3arcl_



not modelled 8.0 35 PDB header:electron transport, photosynthesis
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: crystal structure of oxygen-evolving photosystem ii at 1.9 angstrom2 resolution
91c2ka2B_



not modelled 8.0 42 PDB header:membrane protein
Chain: B: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting
PDBTitle: solution nmr structure of bnip3 transmembrane peptide dimer2 in detergent micelles with his173-ser172 intermonomer3 hydrogen bond restraints
92c2ka1A_



not modelled 8.0 42 PDB header:membrane protein
Chain: A: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting
PDBTitle: solution nmr structure of bnip3 transmembrane peptide dimer2 in detergent micelles
93c2p57A_



not modelled 8.0 32 PDB header:metal binding protein
Chain: A: PDB Molecule:gtpase-activating protein znf289;
PDBTitle: gap domain of znf289, an id1-regulated zinc finger protein
94c2xivA_



not modelled 8.0 80 PDB header:structural protein
Chain: A: PDB Molecule:hypothetical invasion protein;
PDBTitle: structure of rv1477, hypothetical invasion protein of2 mycobacterium tuberculosis
95c3o47A_



not modelled 7.9 18 PDB header:hydrolase, hydrolase activator
Chain: A: PDB Molecule:adp-ribosylation factor gtpase-activating protein 1, adp-
PDBTitle: crystal structure of arfgap1-arf1 fusion protein
96c2k8iA_



not modelled 7.9 38 PDB header:isomerase
Chain: A: PDB Molecule:peptidyl-prolyl cis-trans isomerase;
PDBTitle: solution structure of e.coli slyd
97c1oheA_



not modelled 7.9 20 PDB header:hydrolase
Chain: A: PDB Molecule:cdc14b2 phosphatase;
PDBTitle: structure of cdc14b phosphatase with a peptide ligand
98c3gt2A_



not modelled 7.9 60 PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of the p60 domain from m. avium2 paratuberculosis antigen map1272c
99d1xrda1



not modelled 7.8 23 Fold:Light-harvesting complex subunits
Superfamily:Light-harvesting complex subunits
Family:Light-harvesting complex subunits