Email l.a.kelley@imperial.ac.uk Description P76106 Date Thu Jan 5 12:19:00 GMT 2012 Unique Job ID c10360a209b78b1a

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1whza_ 99.7 28 Fold:dsRBD-like Superfamily:YcfA/nrd intein domain Family:YcfA-like 2 c2wj0B_ 58.0 10 PDB header:hydrolase/dna Chain: B: PDB Molecule:archaeal hjc; PDBTitle: crystal structures of holliday junction resolvases from2 archaeoglobus fulgidus bound to dna substrate 3 d1gefa_ 54.0 25 Fold:Restriction endonuclease-like Superfamily:Restriction endonuclease-like Family:Hjc-like 4 d1ob8a_ 49.8 25 Fold:Restriction endonuclease-like Superfamily:Restriction endonuclease-like Family:Hjc-like 5 d1hh1a_ 49.1 16 Fold:Restriction endonuclease-like Superfamily:Restriction endonuclease-like Family:Hjc-like 6 c3o2qB_ 37.1 19 PDB header:hydrolase Chain: B: PDB Molecule:rna polymerase ii subunit a c-terminal domain phosphatase PDBTitle: crystal structure of the human symplekin-ssu72-ctd phosphopeptide2 complex 7 c3o2sB_ 37.0 19 PDB header:hydrolase Chain: B: PDB Molecule:rna polymerase ii subunit a c-terminal domain phosphatase PDBTitle: crystal structure of the human symplekin-ssu72 complex 8 c2jugB_ 27.5 15 PDB header:biosynthetic protein Chain: B: PDB Molecule:tubc protein; PDBTitle: multienzyme docking in hybrid megasynthetases 9 d1h3da1 24.5 13 Fold:Periplasmic binding protein-like II Superfamily:Periplasmic binding protein-like II Family:Phosphate binding protein-like 10 c3cf4A_ 17.8 12 PDB header:oxidoreductase Chain: A: PDB Molecule:acetyl-coa decarboxylase/synthase alpha subunit; PDBTitle: structure of the codh component of the m. barkeri acds complex 11 d1ul7a_ 17.6 20 Fold:TBP-like Superfamily:KA1-like Family:Kinase associated domain 1, KA1 12 d1nh8a1 16.1 16 Fold:Periplasmic binding protein-like II Superfamily:Periplasmic binding protein-like II Family:Phosphate binding protein-like 13 c2lciA_ 15.9 57 PDB header:de novo protein Chain: A: PDB Molecule:protein or36; PDBTitle: solution nmr structure of de novo designed protein, p-loop ntpase2 fold, northeast structural genomics consortium target or36 (casd3 target) 14 c1q1kA_ 15.1 15 PDB header:transferase Chain: A: PDB Molecule:atp phosphoribosyltransferase; PDBTitle: structure of atp-phosphoribosyltransferase from e. coli complexed with2 pr-atp 15 c2vd3B_ 14.4 17 PDB header:transferase Chain: B: PDB Molecule:atp phosphoribosyltransferase; PDBTitle: the structure of histidine inhibited hisg from2 methanobacterium thermoautotrophicum 16 c1nh7A_ 13.9 11 PDB header:transferase Chain: A: PDB Molecule:atp phosphoribosyltransferase; PDBTitle: atp phosphoribosyltransferase (atp-prtase) from mycobacterium2 tuberculosis 17 c3fdfA_ 13.2 18 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:fr253; PDBTitle: crystal structure of the serine phosphatase of rna2 polymerase ii ctd (ssu72 superfamily) from drosophila3 melanogaster. orthorhombic crystal form. northeast4 structural genomics consortium target fr253. 18 d2doaa1 13.0 20 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:ELL N2 domain-like 19 d1k25a2 12.4 5 Fold:Penicillin-binding protein 2x (pbp-2x), c-terminal domain Superfamily:Penicillin-binding protein 2x (pbp-2x), c-terminal domain Family:Penicillin-binding protein 2x (pbp-2x), c-terminal domain 20 d1o6wa2 11.7 13 Fold:WW domain-like Superfamily:WW domain Family:WW domain 21 c2dcrA_ not modelled 11.1 15 PDB header:transferase Chain: A: PDB Molecule:proto-oncogene tyrosine-protein kinase fes/fps; PDBTitle: fully automated solution structure determination of the fes2 sh2 domain 22 c2v1nA_ not modelled 10.8 31 PDB header:nuclear protein Chain: A: PDB Molecule:protein kin homolog; PDBTitle: solution structure of the region 51-160 of human kin172 reveals a winged helix fold 23 c3jthA_ not modelled 10.7 21 PDB header:transcription Chain: A: PDB Molecule:transcription activator hlyu; PDBTitle: crystal structure of a transcriptional regulator hlyu from2 vibrio vulnificus cmcp6 24 c2e5nA_ not modelled 10.6 33 PDB header:transcription Chain: A: PDB Molecule:rna polymerase ii elongation factor ell2; PDBTitle: solution structure of the ell_n2 domain of target of rna2 polymerase ii elongation factor ell2 25 c2gjwC_ not modelled 10.4 19 PDB header:hydrolase/rna Chain: C: PDB Molecule:trna-splicing endonuclease; PDBTitle: rna recognition and cleavage by an splicing endonuclease 26 c3ieyA_ not modelled 10.1 9 PDB header:hydrolase/rna binding protein Chain: A: PDB Molecule:trna-splicing endonuclease; PDBTitle: crystal structure of the functional nanoarchaeum equitans trna2 splicing endonuclease 27 d1pyya2 not modelled 9.4 0 Fold:Penicillin-binding protein 2x (pbp-2x), c-terminal domain Superfamily:Penicillin-binding protein 2x (pbp-2x), c-terminal domain Family:Penicillin-binding protein 2x (pbp-2x), c-terminal domain 28 c2zkrt_ not modelled 9.2 23 PDB header:ribosomal protein/rna Chain: T: PDB Molecule:rna expansion segment es39 part iii; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map 29 d2fi0a1 not modelled 9.1 29 Fold:SP0561-like Superfamily:SP0561-like Family:SP0561-like 30 c3g3zA_ not modelled 9.0 19 PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator, marr family; PDBTitle: the structure of nmb1585, a marr family regulator from neisseria2 meningitidis 31 c2it0A_ not modelled 8.7 32 PDB header:transcription/dna Chain: A: PDB Molecule:iron-dependent repressor ider; PDBTitle: crystal structure of a two-domain ider-dna complex crystal2 form ii 32 d2p5ka1 not modelled 8.5 28 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Arginine repressor (ArgR), N-terminal DNA-binding domain 33 c2vd2A_ not modelled 8.3 11 PDB header:transferase Chain: A: PDB Molecule:atp phosphoribosyltransferase; PDBTitle: the crystal structure of hisg from b. subtilis 34 d1f1ea_ not modelled 7.5 29 Fold:Histone-fold Superfamily:Histone-fold Family:Archaeal histone 35 d1rp5a2 not modelled 7.4 0 Fold:Penicillin-binding protein 2x (pbp-2x), c-terminal domain Superfamily:Penicillin-binding protein 2x (pbp-2x), c-terminal domain Family:Penicillin-binding protein 2x (pbp-2x), c-terminal domain 36 d1b4aa1 not modelled 7.4 28 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Arginine repressor (ArgR), N-terminal DNA-binding domain 37 c3a1yF_ not modelled 7.4 37 PDB header:ribosomal protein Chain: F: PDB Molecule:50s ribosomal protein p1 (l12p); PDBTitle: the structure of protein complex 38 d1r1ta_ not modelled 7.4 17 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:ArsR-like transcriptional regulators 39 c3hruA_ not modelled 7.4 14 PDB header:transcription Chain: A: PDB Molecule:metalloregulator scar; PDBTitle: crystal structure of scar with bound zn2+ 40 c2jscB_ not modelled 7.1 17 PDB header:transcription Chain: B: PDB Molecule:transcriptional regulator rv1994c/mt2050; PDBTitle: nmr structure of the cadmium metal-sensor cmtr from mycobacterium2 tuberculosis 41 c3eyiB_ not modelled 7.0 30 PDB header:dna binding protein/dna Chain: B: PDB Molecule:z-dna-binding protein 1; PDBTitle: the crystal structure of the second z-dna binding domain of2 human dai (zbp1) in complex with z-dna 42 c1zrjA_ not modelled 6.9 36 PDB header:dna binding protein Chain: A: PDB Molecule:e1b-55kda-associated protein 5 isoform c; PDBTitle: solution structure of the sap domain of human e1b-55kda-2 associated protein 5 isoform c 43 d1gyza_ not modelled 6.8 22 Fold:PABP domain-like Superfamily:Ribosomal protein L20 Family:Ribosomal protein L20 44 c1g3wA_ not modelled 6.8 25 PDB header:gene regulation Chain: A: PDB Molecule:diphtheria toxin repressor; PDBTitle: cd-cys102ser dtxr 45 c2bruC_ not modelled 6.6 27 PDB header:oxidoreductase Chain: C: PDB Molecule:nad(p) transhydrogenase subunit beta; PDBTitle: complex of the domain i and domain iii of escherichia coli2 transhydrogenase 46 c1pt9B_ not modelled 6.6 27 PDB header:oxidoreductase Chain: B: PDB Molecule:nad(p) transhydrogenase, mitochondrial; PDBTitle: crystal structure analysis of the diii component of transhydrogenase2 with a thio-nicotinamide nucleotide analogue 47 d1d4oa_ not modelled 6.6 27 Fold:DHS-like NAD/FAD-binding domain Superfamily:DHS-like NAD/FAD-binding domain Family:Transhydrogenase domain III (dIII) 48 d1h1js_ not modelled 6.6 7 Fold:LEM/SAP HeH motif Superfamily:SAP domain Family:SAP domain 49 c1b4aA_ not modelled 6.6 28 PDB header:repressor Chain: A: PDB Molecule:arginine repressor; PDBTitle: structure of the arginine repressor from bacillus stearothermophilus 50 c2do1A_ not modelled 6.5 21 PDB header:gene regulation Chain: A: PDB Molecule:nuclear protein hcc-1; PDBTitle: solution structure of the sap domain of human nuclear2 protein hcc-1 51 d2a2pa1 not modelled 6.5 20 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Selenoprotein W-related 52 c3ereD_ not modelled 6.5 28 PDB header:dna binding protein/dna Chain: D: PDB Molecule:arginine repressor; PDBTitle: crystal structure of the arginine repressor protein from mycobacterium2 tuberculosis in complex with the dna operator 53 d1i94m_ not modelled 6.4 25 Fold:S13-like H2TH domain Superfamily:S13-like H2TH domain Family:Ribosomal protein S13 54 d1pnoa_ not modelled 6.4 33 Fold:DHS-like NAD/FAD-binding domain Superfamily:DHS-like NAD/FAD-binding domain Family:Transhydrogenase domain III (dIII) 55 c1keeH_ not modelled 6.4 25 PDB header:ligase Chain: H: PDB Molecule:carbamoyl-phosphate synthetase small chain; PDBTitle: inactivation of the amidotransferase activity of carbamoyl phosphate2 synthetase by the antibiotic acivicin 56 c3ieyB_ not modelled 6.4 18 PDB header:hydrolase/rna binding protein Chain: B: PDB Molecule:neq261; PDBTitle: crystal structure of the functional nanoarchaeum equitans trna2 splicing endonuclease 57 d1xrsb2 not modelled 6.3 21 Fold:Dodecin subunit-like Superfamily:D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain Family:D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain 58 d1ub9a_ not modelled 6.3 19 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:MarR-like transcriptional regulators 59 d1g5qa_ not modelled 6.3 12 Fold:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD Superfamily:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD Family:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD 60 c3pqkD_ not modelled 6.3 17 PDB header:transcription Chain: D: PDB Molecule:biofilm growth-associated repressor; PDBTitle: crystal structure of the transcriptional repressor bigr from xylella2 fastidiosa 61 d1zrja1 not modelled 6.3 36 Fold:LEM/SAP HeH motif Superfamily:SAP domain Family:SAP domain 62 c1f5tA_ not modelled 6.2 25 PDB header:transcription/dna Chain: A: PDB Molecule:diphtheria toxin repressor; PDBTitle: diphtheria tox repressor (c102d mutant) complexed with2 nickel and dtxr consensus binding sequence 63 c2k4bA_ not modelled 6.1 4 PDB header:dna binding protein Chain: A: PDB Molecule:transcriptional regulator; PDBTitle: copr repressor structure 64 c1fx7C_ not modelled 6.1 32 PDB header:signaling protein Chain: C: PDB Molecule:iron-dependent repressor ider; PDBTitle: crystal structure of the iron-dependent regulator (ider)2 from mycobacterium tuberculosis 65 d1jqlb_ not modelled 6.0 19 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Extended AAA-ATPase domain 66 c2zkqm_ not modelled 5.9 6 PDB header:ribosomal protein/rna Chain: M: PDB Molecule: PDBTitle: structure of a mammalian ribosomal 40s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map 67 c2vb0A_ not modelled 5.8 28 PDB header:hydrolase Chain: A: PDB Molecule:polyprotein 3bcd; PDBTitle: crystal structure of coxsackievirus b3 proteinase 3c 68 c2qwwB_ not modelled 5.7 19 PDB header:transcription Chain: B: PDB Molecule:transcriptional regulator, marr family; PDBTitle: crystal structure of multiple antibiotic-resistance repressor (marr)2 (yp_013417.1) from listeria monocytogenes 4b f2365 at 2.07 a3 resolution 69 d2fxaa1 not modelled 5.5 21 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:MarR-like transcriptional regulators 70 d1p3y1_ not modelled 5.3 12 Fold:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD Superfamily:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD Family:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD 71 d2d1ha1 not modelled 5.2 12 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:TrmB-like 72 c2kk6A_ not modelled 5.2 23 PDB header:transferase Chain: A: PDB Molecule:proto-oncogene tyrosine-protein kinase fer; PDBTitle: solution structure of sh2 domain of proto-oncogene tyrosine-2 protein kinase fer from homo sapiens, northeast structural3 genomics consortium (nesg) target hr3461d 73 d1p4xa1 not modelled 5.2 10 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:MarR-like transcriptional regulators 74 d2frha1 not modelled 5.1 10 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:MarR-like transcriptional regulators 75 c2kvuA_ not modelled 5.1 29 PDB header:transcription regulator Chain: A: PDB Molecule:mkl/myocardin-like protein 1; PDBTitle: solution nmr structure of sap domain of mkl/myocardin-like2 protein 1 from h.sapiens, northeast structural genomics3 consortium target target hr4547e 76 d1f9na1 not modelled 5.1 28 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Arginine repressor (ArgR), N-terminal DNA-binding domain 77 d2al3a1 not modelled 5.1 11 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:UBX domain 78 d1g3wa1 not modelled 5.0 22 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Iron-dependent repressor protein