Email l.a.kelley@imperial.ac.uk Description P65290 Date Thu Jan 5 12:10:09 GMT 2012 Unique Job ID bfa0aec7d50e07e2

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3cp0A_ 72.4 7 PDB header:membrane protein Chain: A: PDB Molecule:membrane protein implicated in regulation of membrane PDBTitle: crystal structure of the soluble domain of membrane protein implicated2 in regulation of membrane protease activity from corynebacterium3 glutamicum 2 c2kvqG_ 57.1 19 PDB header:transcription Chain: G: PDB Molecule:transcription antitermination protein nusg; PDBTitle: solution structure of nuse:nusg-ctd complex 3 c2jvvA_ 57.1 19 PDB header:transcription Chain: A: PDB Molecule:transcription antitermination protein nusg; PDBTitle: solution structure of e. coli nusg carboxyterminal domain 4 c2lllA_ 54.1 8 PDB header:structural protein Chain: A: PDB Molecule:lamin-b2; PDBTitle: solution nmr structure of c-terminal globular domain of human lamin-2 b2, northeast structural genomics consortium target hr8546a 5 d1nz9a_ 48.3 19 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:N-utilization substance G protein NusG, C-terminal domain 6 d2gnra1 47.6 11 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:SSO2064-like 7 c2e6zA_ 46.6 17 PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt5; PDBTitle: solution structure of the second kow motif of human2 transcription elongation factor spt5 8 d1nppa2 45.5 19 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:N-utilization substance G protein NusG, C-terminal domain 9 d1h9ma1 43.8 14 Fold:OB-fold Superfamily:MOP-like Family:BiMOP, duplicated molybdate-binding domain 10 d1fdra1 38.9 13 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 11 d1k25a1 37.8 10 Fold:Penicillin-binding protein 2x (pbp-2x), c-terminal domain Superfamily:Penicillin-binding protein 2x (pbp-2x), c-terminal domain Family:Penicillin-binding protein 2x (pbp-2x), c-terminal domain 12 d1q1ca1 36.9 20 Fold:FKBP-like Superfamily:FKBP-like Family:FKBP immunophilin/proline isomerase 13 c2dxcG_ 36.7 29 PDB header:hydrolase Chain: G: PDB Molecule:thiocyanate hydrolase subunit alpha; PDBTitle: recombinant thiocyanate hydrolase, fully-matured form 14 d2do3a1 35.7 25 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:SPT5 KOW domain-like 15 d1oxxk1 35.4 8 Fold:OB-fold Superfamily:MOP-like Family:ABC-transporter additional domain 16 d1pyya1 35.3 8 Fold:Penicillin-binding protein 2x (pbp-2x), c-terminal domain Superfamily:Penicillin-binding protein 2x (pbp-2x), c-terminal domain Family:Penicillin-binding protein 2x (pbp-2x), c-terminal domain 17 c3qz9D_ 34.0 29 PDB header:lyase Chain: D: PDB Molecule:co-type nitrile hydratase beta subunit; PDBTitle: crystal structure of co-type nitrile hydratase beta-y215f from2 pseudomonas putida. 18 c1h9mB_ 33.8 11 PDB header:binding protein Chain: B: PDB Molecule:molybdenum-binding-protein; PDBTitle: two crystal structures of the cytoplasmic molybdate-binding2 protein modg suggest a novel cooperative binding mechanism3 and provide insights into ligand-binding specificity.4 peg-grown form with molybdate bound 19 d1ugpb_ 33.2 21 Fold:SH3-like barrel Superfamily:Electron transport accessory proteins Family:Nitrile hydratase beta chain 20 d1ifra_ 33.2 13 Fold:Immunoglobulin-like beta-sandwich Superfamily:Lamin A/C globular tail domain Family:Lamin A/C globular tail domain 21 d1h9ra1 not modelled 33.0 14 Fold:OB-fold Superfamily:MOP-like Family:BiMOP, duplicated molybdate-binding domain 22 d1v29b_ not modelled 31.6 14 Fold:SH3-like barrel Superfamily:Electron transport accessory proteins Family:Nitrile hydratase beta chain 23 c3e0eA_ not modelled 31.3 19 PDB header:replication Chain: A: PDB Molecule:replication protein a; PDBTitle: crystal structure of a domain of replication protein a from2 methanococcus maripaludis. northeast structural genomics3 targe mrr110b 24 d1ivta_ not modelled 30.7 13 Fold:Immunoglobulin-like beta-sandwich Superfamily:Lamin A/C globular tail domain Family:Lamin A/C globular tail domain 25 c3jt0B_ not modelled 28.1 15 PDB header:structural protein Chain: B: PDB Molecule:lamin-b1; PDBTitle: crystal structure of the c-terminal fragment (426-558)2 lamin-b1 from homo sapiens, northeast structural genomics3 consortium target hr5546a 26 d2zjrm1 not modelled 27.7 36 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:Ribosomal protein L19 27 d2asba1 not modelled 27.2 6 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 28 d1pkla3 not modelled 27.1 37 Fold:Pyruvate kinase C-terminal domain-like Superfamily:PK C-terminal domain-like Family:Pyruvate kinase, C-terminal domain 29 c2fhdA_ not modelled 22.4 9 PDB header:cell cycle Chain: A: PDB Molecule:dna repair protein rhp9/crb2; PDBTitle: crystal structure of crb2 tandem tudor domains 30 d2qdyb1 not modelled 21.8 23 Fold:SH3-like barrel Superfamily:Electron transport accessory proteins Family:Nitrile hydratase beta chain 31 d1fr3a_ not modelled 21.4 8 Fold:OB-fold Superfamily:MOP-like Family:Molybdate/tungstate binding protein MOP 32 c2kppA_ not modelled 20.7 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:lin0431 protein; PDBTitle: solution nmr structure of lin0431 protein from listeria innocua.2 northeast structural genomics consortium target lkr112 33 d1h9ra2 not modelled 20.4 9 Fold:OB-fold Superfamily:MOP-like Family:BiMOP, duplicated molybdate-binding domain 34 d1v43a2 not modelled 19.5 9 Fold:OB-fold Superfamily:MOP-like Family:ABC-transporter additional domain 35 c1m1gB_ not modelled 18.9 19 PDB header:transcription Chain: B: PDB Molecule:transcription antitermination protein nusg; PDBTitle: crystal structure of aquifex aeolicus n-utilization2 substance g (nusg), space group p2(1) 36 d1yloa1 not modelled 18.5 16 Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Aminopeptidase/glucanase lid domain Family:Aminopeptidase/glucanase lid domain 37 d1vhea1 not modelled 18.2 23 Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Aminopeptidase/glucanase lid domain Family:Aminopeptidase/glucanase lid domain 38 d1kyaa2 not modelled 17.9 20 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 39 c2k5hA_ not modelled 16.6 11 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved protein; PDBTitle: solution nmr structure of protein encoded by mth693 from2 methanobacterium thermoautotrophicum: northeast structural3 genomics consortium target tt824a 40 c1h9sA_ not modelled 16.2 14 PDB header:transcription regulator Chain: A: PDB Molecule:molybdenum transport protein mode; PDBTitle: molybdate bound complex of dimop domain of mode from e.coli 41 d2ccwa1 not modelled 15.8 7 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 42 d1g2914 not modelled 15.5 15 Fold:OB-fold Superfamily:MOP-like Family:ABC-transporter additional domain 43 d1te7a_ not modelled 15.3 15 Fold:PUA domain-like Superfamily:PUA domain-like Family:yqfB-like 44 d1ah9a_ not modelled 15.2 12 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 45 d1qfja1 not modelled 15.0 12 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 46 d1h9ma2 not modelled 14.9 10 Fold:OB-fold Superfamily:MOP-like Family:BiMOP, duplicated molybdate-binding domain 47 d2j01t1 not modelled 14.6 36 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:Ribosomal protein L19 48 c1rouA_ not modelled 14.6 19 PDB header:rotamase (isomerase) Chain: A: PDB Molecule:fkbp59-i; PDBTitle: structure of fkbp59-i, the n-terminal domain of a 59 kda2 fk506-binding protein, nmr, 22 structures 49 c3p8bB_ not modelled 14.1 12 PDB header:transferase/transcription Chain: B: PDB Molecule:transcription antitermination protein nusg; PDBTitle: x-ray crystal structure of pyrococcus furiosus transcription2 elongation factor spt4/5 50 d1y0ya1 not modelled 13.8 10 Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Aminopeptidase/glucanase lid domain Family:Aminopeptidase/glucanase lid domain 51 d2cowa1 not modelled 13.6 13 Fold:SH3-like barrel Superfamily:Cap-Gly domain Family:Cap-Gly domain 52 c3zv0D_ not modelled 13.1 23 PDB header:cell cycle Chain: D: PDB Molecule:h/aca ribonucleoprotein complex subunit 4; PDBTitle: structure of the shq1p-cbf5p complex 53 c2lbgA_ not modelled 12.9 18 PDB header:membrane protein Chain: A: PDB Molecule:major prion protein; PDBTitle: structure of the chr of the prion protein in dpc micelles 54 d1hh2p1 not modelled 12.8 13 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 55 c3gwqB_ not modelled 12.7 7 PDB header:lyase Chain: B: PDB Molecule:d-serine deaminase; PDBTitle: crystal structure of a putative d-serine deaminase (bxe_a4060) from2 burkholderia xenovorans lb400 at 2.00 a resolution 56 d1guta_ not modelled 12.7 7 Fold:OB-fold Superfamily:MOP-like Family:Molybdate/tungstate binding protein MOP 57 d3d31a1 not modelled 12.3 5 Fold:OB-fold Superfamily:MOP-like Family:ABC-transporter additional domain 58 c2egcA_ not modelled 12.3 11 PDB header:signaling protein Chain: A: PDB Molecule:sh3 and px domain-containing protein 2a; PDBTitle: solution structure of the fifth sh3 domain from human2 kiaa0418 protein 59 c2k14A_ not modelled 12.2 12 PDB header:unknown function Chain: A: PDB Molecule:yuaf protein; PDBTitle: solution structure of the soluble domain of the nfed2 protein yuaf from bacillus subtilis 60 c2xhcA_ not modelled 11.9 29 PDB header:transcription Chain: A: PDB Molecule:transcription antitermination protein nusg; PDBTitle: crystal structure of thermotoga maritima n-utilization substance g2 (nusg) 61 d1v10a2 not modelled 11.0 17 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 62 d2hqha1 not modelled 10.8 11 Fold:SH3-like barrel Superfamily:Cap-Gly domain Family:Cap-Gly domain 63 d2cp5a1 not modelled 10.5 13 Fold:SH3-like barrel Superfamily:Cap-Gly domain Family:Cap-Gly domain 64 d2awna1 not modelled 10.5 4 Fold:OB-fold Superfamily:MOP-like Family:ABC-transporter additional domain 65 d2grea1 not modelled 10.4 13 Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Aminopeptidase/glucanase lid domain Family:Aminopeptidase/glucanase lid domain 66 c3dm3A_ not modelled 9.8 16 PDB header:replication Chain: A: PDB Molecule:replication factor a; PDBTitle: crystal structure of a domain of a replication factor a2 protein, from methanocaldococcus jannaschii. northeast3 structural genomics target mjr118e 67 c1piwA_ not modelled 9.7 9 PDB header:oxidoreductase Chain: A: PDB Molecule:hypothetical zinc-type alcohol dehydrogenase- PDBTitle: apo and holo structures of an nadp(h)-dependent cinnamyl2 alcohol dehydrogenase from saccharomyces cerevisiae 68 d2q07a1 not modelled 9.6 10 Fold:PUA domain-like Superfamily:PUA domain-like Family:PUA domain 69 c2d6fA_ not modelled 9.4 14 PDB header:ligase/rna Chain: A: PDB Molecule:glutamyl-trna(gln) amidotransferase subunit d; PDBTitle: crystal structure of glu-trna(gln) amidotransferase in the2 complex with trna(gln) 70 d2e3ia1 not modelled 9.3 18 Fold:SH3-like barrel Superfamily:Cap-Gly domain Family:Cap-Gly domain 71 d2gycn1 not modelled 9.3 23 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:Ribosomal protein L19 72 c1nwxN_ not modelled 9.1 36 PDB header:ribosome Chain: N: PDB Molecule:ribosomal protein l19; PDBTitle: complex of the large ribosomal subunit from deinococcus2 radiodurans with abt-773 73 d2vv5a1 not modelled 9.1 15 Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Mechanosensitive channel protein MscS (YggB), middle domain 74 d2zjrr1 not modelled 8.8 17 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:Ribosomal proteins L24p and L21e 75 c3m9qA_ not modelled 8.8 16 PDB header:dna binding protein Chain: A: PDB Molecule:protein male-specific lethal-3; PDBTitle: drosophila msl3 chromodomain 76 d1q7ha1 not modelled 8.7 9 Fold:PUA domain-like Superfamily:PUA domain-like Family:PUA domain 77 d1whma_ not modelled 8.7 5 Fold:SH3-like barrel Superfamily:Cap-Gly domain Family:Cap-Gly domain 78 c3fp9E_ not modelled 8.6 8 PDB header:hydrolase Chain: E: PDB Molecule:proteasome-associated atpase; PDBTitle: crystal structure of intern domain of proteasome-associated2 atpase, mycobacterium tuberculosis 79 d1k3ra1 not modelled 8.6 18 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Hypothetical protein MTH1 (MT0001), insert domain 80 c2piaA_ not modelled 8.2 11 PDB header:reductase Chain: A: PDB Molecule:phthalate dioxygenase reductase; PDBTitle: phthalate dioxygenase reductase: a modular structure for2 electron transfer from pyridine nucleotides to [2fe-2s] 81 c1krhA_ not modelled 8.0 19 PDB header:oxidoreductase Chain: A: PDB Molecule:benzoate 1,2-dioxygenase reductase; PDBTitle: x-ray stucture of benzoate dioxygenase reductase 82 c3es4B_ not modelled 8.0 13 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein duf861 with a rmlc-like cupin fold; PDBTitle: crystal structure of protein of unknown function (duf861) with a rmlc-2 like cupin fold (17741406) from agrobacterium tumefaciens str. c583 (dupont) at 1.64 a resolution 83 d1piwa1 not modelled 7.8 9 Fold:GroES-like Superfamily:GroES-like Family:Alcohol dehydrogenase-like, N-terminal domain 84 d2cp2a1 not modelled 7.8 13 Fold:SH3-like barrel Superfamily:Cap-Gly domain Family:Cap-Gly domain 85 d2cp0a1 not modelled 7.6 17 Fold:SH3-like barrel Superfamily:Cap-Gly domain Family:Cap-Gly domain 86 d2jnaa1 not modelled 7.6 20 Fold:Dodecin subunit-like Superfamily:YdgH-like Family:YdgH-like 87 d1tova_ not modelled 7.6 17 Fold:SH3-like barrel Superfamily:Cap-Gly domain Family:Cap-Gly domain 88 c3i4oA_ not modelled 7.5 6 PDB header:translation Chain: A: PDB Molecule:translation initiation factor if-1; PDBTitle: crystal structure of translation initiation factor 1 from2 mycobacterium tuberculosis 89 c3jxoB_ not modelled 7.4 10 PDB header:transport protein Chain: B: PDB Molecule:trka-n domain protein; PDBTitle: crystal structure of an octomeric two-subunit trka k+ channel ring2 gating assembly, tm1088a:tm1088b, from thermotoga maritima 90 d1iq8a3 not modelled 7.4 11 Fold:PUA domain-like Superfamily:PUA domain-like Family:PUA domain 91 d1hfua2 not modelled 7.4 27 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 92 d1uufa1 not modelled 7.3 10 Fold:GroES-like Superfamily:GroES-like Family:Alcohol dehydrogenase-like, N-terminal domain 93 d1m1ha1 not modelled 7.1 15 Fold:N-utilization substance G protein NusG, insert domain Superfamily:N-utilization substance G protein NusG, insert domain Family:N-utilization substance G protein NusG, insert domain 94 c2asbA_ not modelled 7.0 6 PDB header:transcription/rna Chain: A: PDB Molecule:transcription elongation protein nusa; PDBTitle: structure of a mycobacterium tuberculosis nusa-rna complex 95 c3zvkG_ not modelled 7.0 18 PDB header:antitoxin/toxin/dna Chain: G: PDB Molecule:antitoxin of toxin-antitoxin system vapb; PDBTitle: crystal structure of vapbc2 from rickettsia felis bound to2 a dna fragment from their promoter 96 c1yqxB_ not modelled 6.9 26 PDB header:oxidoreductase Chain: B: PDB Molecule:sinapyl alcohol dehydrogenase; PDBTitle: sinapyl alcohol dehydrogenase at 2.5 angstrom resolution 97 c2e4hA_ not modelled 6.8 22 PDB header:structural protein Chain: A: PDB Molecule:restin; PDBTitle: solution structure of cytoskeletal protein in complex with2 tubulin tail 98 c2yyzA_ not modelled 6.7 6 PDB header:transport protein Chain: A: PDB Molecule:sugar abc transporter, atp-binding protein; PDBTitle: crystal structure of sugar abc transporter, atp-binding protein 99 d2apoa1 not modelled 6.7 18 Fold:PUA domain-like Superfamily:PUA domain-like Family:PUA domain