PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d1v29b_

Fold library id	Fold	Superfamily	Family
d1v29b_	SH3-like barrel	Electron transport accessory proteins	Nitrile hydratase beta chain

Links to external resources
Added to library: Tue Mar 16 13:22:31 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M N G I H D V G G M D G F G K I M Y V K E E E D T Y F K H D W E R L T F G L V A G C M A Q G L G M K A F D E F R I G I E K M R P V D Y L T S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
S
T T T
S
S S T S S
S S S T S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S Y Y G H W I A T V A Y N L L E T G V L D E K E L E D R T Q A F M E K P D T K I Q R W E N P K L V K V V E K A L L E G L S P V R E V S S F P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence R F E V G E R I K T R N I H P T G H T R F P R Y V R D K Y G V I E E V Y G A H V F P D D A A H R K G E N P Q Y L Y R V R F D A E E L W G V K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T
S S
S
G G G T T
T T T S
S S

. . . . . . . . . 220 . . . . . . . . .

Sequence Q N D S V Y I D L W E G Y L E P V S H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
G G G

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	N	G	I	H	D	V	G	G	M	D	G	F	G	K	I	M	Y	V	K	E	E	E	D	T	Y	F	K	H	D	W	E	R	L	T	F	G	L	V	A	G	C	M	A	Q	G	L	G	M	K	A	F	D	E	F	R	I	G	I	E	K	M	R	P	V	D	Y	L	T	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T			T	T				S								T	T	T			S		S	S																	T	S	S		S	S	S									T	S								S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	Y	Y	G	H	W	I	A	T	V	A	Y	N	L	L	E	T	G	V	L	D	E	K	E	L	E	D	R	T	Q	A	F	M	E	K	P	D	T	K	I	Q	R	W	E	N	P	K	L	V	K	V	V	E	K	A	L	L	E	G	L	S	P	V	R	E	V	S	S	F	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T	S	S																T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	F	E	V	G	E	R	I	K	T	R	N	I	H	P	T	G	H	T	R	F	P	R	Y	V	R	D	K	Y	G	V	I	E	E	V	Y	G	A	H	V	F	P	D	D	A	A	H	R	K	G	E	N	P	Q	Y	L	Y	R	V	R	F	D	A	E	E	L	W	G	V	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S			T	T											S	S			S			G	G	G	T	T																			T	T	T	S																			S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Sequence	Q	N	D	S	V	Y	I	D	L	W	E	G	Y	L	E	P	V	S	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S									G	G	G