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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3jxoB_

Fold library idPDB HeaderMoleculeTitle
c3jxoB_PDB header: transport proteinChain: B: PDB Molecule: trka-n domain protein;PDBTitle: crystal structure of an octomeric two-subunit trka k+2 channel ring gating assembly, tm1088a:tm1088b, from3 thermotoga maritima


Added to library: Sun Aug 29 01:03:24 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NLYFQGMIPLEQGIEFLSVNVEEDSPVVGKKLKDLPLPRDSIIAAIVRGGVLVVPRGDTEILSGDKLYVI
Predicted secondary structure




































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Known secondary structure (DSSP)




STT

TT
TTTT
BGGG



TTTT


TT
B

TT
 .........80.....
Sequence VSAEAKETVEETLLG
Predicted secondary structure


SS confidence














Known secondary structure (DSSP) TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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