PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3qz9D_

Fold library id	PDB Header	Molecule	Title
c3qz9D_	PDB header: lyase	Chain: D: PDB Molecule: co-type nitrile hydratase beta subunit;	PDBTitle: crystal structure of co-type nitrile hydratase beta-y215f from2 pseudomonas putida.

Links to external resources
Added to library: Sat Mar 26 08:48:11 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M N G I H D T G G A H G Y G P V Y R E P N E P V F R Y D W E K T V M S L L P A L L A N G N F N L D E F R H S I E R M G P A H Y L E G T Y Y E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T
T T
T T
S
S S T T S S
T S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence H W L H V F E N L L V E K G V L T A T E V A T G K A A S G K T A T P V L T P A I V D G L L S T G A S A A R E E G A R A R F A V G D K V R V L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S
T
S S S S
S
B
S
S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence N K N P V G H T R M P R Y T R G K V G T V V I D H G V F V T P D T A A H G K G E H P Q H V Y T V S F T S V E L W G Q D A S S P K D T I R V D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S
G G G T T
T T T S
T T T T
S S

. . . . . . . . .

Sequence L W D D F L E P A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	N	G	I	H	D	T	G	G	A	H	G	Y	G	P	V	Y	R	E	P	N	E	P	V	F	R	Y	D	W	E	K	T	V	M	S	L	L	P	A	L	L	A	N	G	N	F	N	L	D	E	F	R	H	S	I	E	R	M	G	P	A	H	Y	L	E	G	T	Y	Y	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	T	T			T	T											T	T			S		S	S																T	T	S	S											T	S								S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	H	W	L	H	V	F	E	N	L	L	V	E	K	G	V	L	T	A	T	E	V	A	T	G	K	A	A	S	G	K	T	A	T	P	V	L	T	P	A	I	V	D	G	L	L	S	T	G	A	S	A	A	R	E	E	G	A	R	A	R	F	A	V	G	D	K	V	R	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T	S	S								T			S	S	S	S					S																	B		S			S						T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	K	N	P	V	G	H	T	R	M	P	R	Y	T	R	G	K	V	G	T	V	V	I	D	H	G	V	F	V	T	P	D	T	A	A	H	G	K	G	E	H	P	Q	H	V	Y	T	V	S	F	T	S	V	E	L	W	G	Q	D	A	S	S	P	K	D	T	I	R	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S				S		G	G	G	T	T																			T	T	T	S																			T	T	T	T			S	S
	.	.	.	.	.	.	.	.	.
Sequence	L	W	D	D	F	L	E	P	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G