Email l.a.kelley@imperial.ac.uk Description P0ACV4 Date Thu Jan 5 11:19:09 GMT 2012 Unique Job ID ae0d29a2fdbeae0b

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1a92B_ 52.0 21 PDB header:leucine zipper Chain: B: PDB Molecule:delta antigen; PDBTitle: oligomerization domain of hepatitis delta antigen 2 c1ci6B_ 50.5 21 PDB header:transcription Chain: B: PDB Molecule:transcription factor c/ebp beta; PDBTitle: transcription factor atf4-c/ebp beta bzip heterodimer 3 c3errB_ 49.0 18 PDB header:ligase Chain: B: PDB Molecule:fusion protein of microtubule binding domain from PDBTitle: microtubule binding domain from mouse cytoplasmic dynein as2 a fusion with seryl-trna synthetase 4 c1u0iA_ 42.7 24 PDB header:de novo protein Chain: A: PDB Molecule:iaal-e3; PDBTitle: iaal-e3/k3 heterodimer 5 c3kinB_ 40.8 16 PDB header:motor protein Chain: B: PDB Molecule:kinesin heavy chain; PDBTitle: kinesin (dimeric) from rattus norvegicus 6 d1u58a2 39.2 19 Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain 7 d1uuja_ 35.2 35 Fold:Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain Superfamily:Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain Family:Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 8 c1u2uA_ 34.3 12 PDB header:transcription Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: nmr solution structure of a designed heterodimeric leucine2 zipper 9 c3n4xB_ 33.8 14 PDB header:replication Chain: B: PDB Molecule:monopolin complex subunit csm1; PDBTitle: structure of csm1 full-length 10 c2l5gB_ 30.9 27 PDB header:transcription regulator Chain: B: PDB Molecule:putative uncharacterized protein ncor2; PDBTitle: co-ordinates and 1h, 13c and 15n chemical shift assignments for the2 complex of gps2 53-90 and smrt 167-207 11 c1zxaB_ 30.5 10 PDB header:transferase Chain: B: PDB Molecule:cgmp-dependent protein kinase 1, alpha isozyme; PDBTitle: solution structure of the coiled-coil domain of cgmp-2 dependent protein kinase ia 12 c3eh0C_ 30.3 10 PDB header:transferase Chain: C: PDB Molecule:udp-3-o-[3-hydroxymyristoyl] glucosamine n- PDBTitle: crystal structure of lpxd from escherichia coli 13 c1hf9B_ 29.9 13 PDB header:atpase inhibitor Chain: B: PDB Molecule:atpase inhibitor (mitochondrial); PDBTitle: c-terminal coiled-coil domain from bovine if1 14 c2xzrA_ 28.5 9 PDB header:cell adhesion Chain: A: PDB Molecule:immunoglobulin-binding protein eibd; PDBTitle: escherichia coli immunoglobulin-binding protein eibd 391-438 fused2 to gcn4 adaptors 15 c2wg6L_ 27.5 15 PDB header:transcription,hydrolase Chain: L: PDB Molecule:general control protein gcn4, PDBTitle: proteasome-activating nucleotidase (pan) n-domain (57-134)2 from archaeoglobus fulgidus fused to gcn4, p61a mutant 16 c1ihqA_ 27.5 17 PDB header:de novo protein Chain: A: PDB Molecule:chimeric peptide glytm1bzip: tropomyosin alpha PDBTitle: glytm1bzip: a chimeric peptide model of the n-terminus of a2 rat short alpha tropomyosin with the n-terminus encoded by3 exon 1b 17 c1debA_ 26.3 8 PDB header:structural protein Chain: A: PDB Molecule:adenomatous polyposis coli protein; PDBTitle: crystal structure of the n-terminal coiled coil domain from2 apc 18 c2kncB_ 26.3 18 PDB header:cell adhesion Chain: B: PDB Molecule:integrin beta-3; PDBTitle: platelet integrin alfaiib-beta3 transmembrane-cytoplasmic2 heterocomplex 19 c3kltB_ 24.6 9 PDB header:structural protein Chain: B: PDB Molecule:vimentin; PDBTitle: crystal structure of a vimentin fragment 20 c3m9bK_ 23.5 10 PDB header:chaperone Chain: K: PDB Molecule:proteasome-associated atpase; PDBTitle: crystal structure of the amino terminal coiled coil domain and the2 inter domain of the mycobacterium tuberculosis proteasomal atpase mpa 21 d1k1fa_ not modelled 23.1 29 Fold:Bcr-Abl oncoprotein oligomerization domain Superfamily:Bcr-Abl oncoprotein oligomerization domain Family:Bcr-Abl oncoprotein oligomerization domain 22 c1by0A_ not modelled 22.3 23 PDB header:rna binding protein Chain: A: PDB Molecule:protein (hepatitis delta antigen); PDBTitle: n-terminal leucine-repeat region of hepatitis delta antigen 23 d1fewa_ not modelled 21.4 11 Fold:Spectrin repeat-like Superfamily:Smac/diablo Family:Smac/diablo 24 c3sjaG_ not modelled 20.1 15 PDB header:hydrolase/transport protein Chain: G: PDB Molecule:golgi to er traffic protein 1; PDBTitle: crystal structure of s. cerevisiae get3 in the open state in complex2 with get1 cytosolic domain 25 c3gw6F_ not modelled 18.5 32 PDB header:chaperone Chain: F: PDB Molecule:endo-n-acetylneuraminidase; PDBTitle: intramolecular chaperone 26 c3swfA_ not modelled 18.5 18 PDB header:transport protein Chain: A: PDB Molecule:cgmp-gated cation channel alpha-1; PDBTitle: cnga1 621-690 containing clz domain 27 d1f6ga_ not modelled 17.6 10 Fold:Voltage-gated potassium channels Superfamily:Voltage-gated potassium channels Family:Voltage-gated potassium channels 28 c2ke4A_ not modelled 17.4 14 PDB header:membrane protein Chain: A: PDB Molecule:cdc42-interacting protein 4; PDBTitle: the nmr structure of the tc10 and cdc42 interacting domain2 of cip4 29 c2iu9C_ not modelled 17.1 21 PDB header:transferase Chain: C: PDB Molecule:udp-3-o-[3-hydroxymyristoyl] glucosamine PDBTitle: chlamydia trachomatis lpxd with 100mm udpglcnac (complex ii) 30 c3he5D_ not modelled 16.8 18 PDB header:de novo protein Chain: D: PDB Molecule:synzip2; PDBTitle: heterospecific coiled-coil pair synzip2:synzip1 31 c2w6aB_ not modelled 16.3 17 PDB header:signaling protein Chain: B: PDB Molecule:arf gtpase-activating protein git1; PDBTitle: x-ray structure of the dimeric git1 coiled-coil domain 32 d1ivsa1 not modelled 15.7 19 Fold:Long alpha-hairpin Superfamily:tRNA-binding arm Family:Valyl-tRNA synthetase (ValRS) C-terminal domain 33 c3sjbC_ not modelled 14.2 15 PDB header:hydrolase/transport protein Chain: C: PDB Molecule:golgi to er traffic protein 1; PDBTitle: crystal structure of s. cerevisiae get3 in the open state in complex2 with get1 cytosolic domain 34 c3a7pB_ not modelled 14.2 15 PDB header:protein transport Chain: B: PDB Molecule:autophagy protein 16; PDBTitle: the crystal structure of saccharomyces cerevisiae atg16 35 c1junB_ not modelled 13.6 31 PDB header:transcription regulation Chain: B: PDB Molecule:c-jun homodimer; PDBTitle: nmr study of c-jun homodimer 36 c1gk4A_ not modelled 13.4 11 PDB header:vimentin Chain: A: PDB Molecule:vimentin; PDBTitle: human vimentin coil 2b fragment (cys2) 37 c3qnqD_ not modelled 13.1 21 PDB header:membrane protein, transport protein Chain: D: PDB Molecule:pts system, cellobiose-specific iic component; PDBTitle: crystal structure of the transporter chbc, the iic component from the2 n,n'-diacetylchitobiose-specific phosphotransferase system 38 c3he4A_ not modelled 12.5 17 PDB header:de novo protein Chain: A: PDB Molecule:synzip6; PDBTitle: heterospecific coiled-coil pair synzip5:synzip6 39 c2e43A_ not modelled 12.5 19 PDB header:transcription/dna Chain: A: PDB Molecule:ccaat/enhancer-binding protein beta; PDBTitle: crystal structure of c/ebpbeta bzip homodimer k269a mutant2 bound to a high affinity dna fragment 40 c2gd5B_ not modelled 12.5 12 PDB header:protein transport Chain: B: PDB Molecule:charged multivesicular body protein 3; PDBTitle: structural basis for budding by the escrtiii factor chmp3 41 c3cvfA_ not modelled 11.8 15 PDB header:signaling protein Chain: A: PDB Molecule:homer protein homolog 3; PDBTitle: crystal structure of the carboxy terminus of homer3 42 d1uklc_ not modelled 11.1 5 Fold:HLH-like Superfamily:HLH, helix-loop-helix DNA-binding domain Family:HLH, helix-loop-helix DNA-binding domain 43 c1kddC_ not modelled 10.4 19 PDB header:de novo protein Chain: C: PDB Molecule:gcn4 acid base heterodimer acid-d12la16i; PDBTitle: x-ray structure of the coiled coil gcn4 acid base2 heterodimer acid-d12la16i base-d12la16l 44 c1kddF_ not modelled 10.1 19 PDB header:de novo protein Chain: F: PDB Molecule:gcn4 acid base heterodimer acid-d12la16i; PDBTitle: x-ray structure of the coiled coil gcn4 acid base2 heterodimer acid-d12la16i base-d12la16l 45 c3movB_ not modelled 10.0 10 PDB header:structural protein Chain: B: PDB Molecule:lamin-b1; PDBTitle: crystal structure of human lamin-b1 coil 2 segment 46 c1gk7A_ not modelled 9.5 21 PDB header:vimentin Chain: A: PDB Molecule:vimentin; PDBTitle: human vimentin coil 1a fragment (1a) 47 c2ergA_ not modelled 9.5 23 PDB header:transcription activator/dna Chain: A: PDB Molecule:regulatory protein leu3; PDBTitle: crystal structure of leu3 dna-binding domain with a single2 h50c mutation complexed with a 15mer dna duplex 48 c1t3jA_ not modelled 9.3 20 PDB header:membrane protein Chain: A: PDB Molecule:mitofusin 1; PDBTitle: mitofusin domain hr2 v686m/i708m mutant 49 d1k4ta1 not modelled 9.1 19 Fold:Long alpha-hairpin Superfamily:Eukaryotic DNA topoisomerase I, dispensable insert domain Family:Eukaryotic DNA topoisomerase I, dispensable insert domain 50 d1ef1c_ not modelled 9.0 26 Fold:Non-globular all-alpha subunits of globular proteins Superfamily:Moesin tail domain Family:Moesin tail domain 51 c3hnwB_ not modelled 8.9 5 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a basic coiled-coil protein of unknown function2 from eubacterium eligens atcc 27750 52 c3pmoA_ not modelled 8.9 20 PDB header:transferase Chain: A: PDB Molecule:udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase; PDBTitle: the structure of lpxd from pseudomonas aeruginosa at 1.3 a resolution 53 c1x8yA_ not modelled 8.5 5 PDB header:structural protein Chain: A: PDB Molecule:lamin a/c; PDBTitle: human lamin coil 2b 54 d1tbga_ not modelled 8.3 18 Fold:7-bladed beta-propeller Superfamily:WD40 repeat-like Family:WD40-repeat 55 c2hpcF_ not modelled 8.3 3 PDB header:blood clotting Chain: F: PDB Molecule:fibrinogen, gamma polypeptide; PDBTitle: crystal structure of fragment d from human fibrinogen complexed with2 gly-pro-arg-pro-amide. 56 c1kddA_ not modelled 8.1 17 PDB header:de novo protein Chain: A: PDB Molecule:gcn4 acid base heterodimer acid-d12la16i; PDBTitle: x-ray structure of the coiled coil gcn4 acid base2 heterodimer acid-d12la16i base-d12la16l 57 c2voyB_ not modelled 8.1 23 PDB header:hydrolase Chain: B: PDB Molecule:sarcoplasmic/endoplasmic reticulum calcium PDBTitle: cryoem model of copa, the copper transporting atpase from2 archaeoglobus fulgidus 58 c1wazA_ not modelled 7.9 16 PDB header:transport protein Chain: A: PDB Molecule:merf; PDBTitle: nmr structure determination of the bacterial mercury2 transporter, merf, in micelles 59 c3frvA_ not modelled 7.9 15 PDB header:protein transport Chain: A: PDB Molecule:charged multivesicular body protein 3; PDBTitle: structure of human chmp3 (residues 1-150) 60 c1ci6A_ not modelled 7.6 8 PDB header:transcription Chain: A: PDB Molecule:transcription factor atf-4; PDBTitle: transcription factor atf4-c/ebp beta bzip heterodimer 61 c3a0hl_ not modelled 7.5 19 PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of i-substituted photosystem ii complex 62 c3a0hL_ not modelled 7.5 19 PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of i-substituted photosystem ii complex 63 c1kd9C_ not modelled 7.3 22 PDB header:de novo protein Chain: C: PDB Molecule:gcn4 acid base heterodimer acid-d12la16l; PDBTitle: x-ray structure of the coiled coil gcn4 acid base2 heterodimer acid-d12la16l base-d12la16l 64 c1kd9F_ not modelled 7.3 22 PDB header:de novo protein Chain: F: PDB Molecule:gcn4 acid base heterodimer acid-d12la16l; PDBTitle: x-ray structure of the coiled coil gcn4 acid base2 heterodimer acid-d12la16l base-d12la16l 65 c1kd9A_ not modelled 7.3 22 PDB header:de novo protein Chain: A: PDB Molecule:gcn4 acid base heterodimer acid-d12la16l; PDBTitle: x-ray structure of the coiled coil gcn4 acid base2 heterodimer acid-d12la16l base-d12la16l 66 c1mofA_ not modelled 7.3 23 PDB header:viral protein Chain: A: PDB Molecule:moloney murine leukemia virus p15; PDBTitle: coat protein 67 c2lf0A_ not modelled 7.3 25 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein yibl; PDBTitle: solution structure of sf3636, a two-domain unknown function protein2 from shigella flexneri 2a, determined by joint refinement of nmr,3 residual dipolar couplings and small-angle x-ray scatting, nesg4 target sfr339/ocsp target sf3636 68 c2z5hB_ not modelled 7.1 19 PDB header:contractile protein Chain: B: PDB Molecule:general control protein gcn4 and tropomyosin PDBTitle: crystal structure of the head-to-tail junction of2 tropomyosin complexed with a fragment of tnt 69 c1aq5C_ not modelled 6.7 11 PDB header:coiled-coil Chain: C: PDB Molecule:cartilage matrix protein; PDBTitle: high-resolution solution nmr structure of the trimeric coiled-coil2 domain of chicken cartilage matrix protein, 20 structures 70 c3a7oB_ not modelled 6.6 14 PDB header:protein transport Chain: B: PDB Molecule:autophagy protein 16; PDBTitle: the crystal structure of the coiled-coil domain of2 saccharomyces cerevisiae atg16 71 c2wvrB_ not modelled 6.6 9 PDB header:replication Chain: B: PDB Molecule:geminin; PDBTitle: human cdt1:geminin complex 72 c1gk6B_ not modelled 6.6 13 PDB header:vimentin Chain: B: PDB Molecule:vimentin; PDBTitle: human vimentin coil 2b fragment linked to gcn4 leucine2 zipper (z2b) 73 c2l5gA_ not modelled 6.5 28 PDB header:transcription regulator Chain: A: PDB Molecule:g protein pathway suppressor 2; PDBTitle: co-ordinates and 1h, 13c and 15n chemical shift assignments for the2 complex of gps2 53-90 and smrt 167-207 74 d1ab4a_ not modelled 6.5 10 Fold:Type II DNA topoisomerase Superfamily:Type II DNA topoisomerase Family:Type II DNA topoisomerase 75 c2yy0D_ not modelled 6.4 17 PDB header:transcription Chain: D: PDB Molecule:c-myc-binding protein; PDBTitle: crystal structure of ms0802, c-myc-1 binding protein domain2 from homo sapiens 76 d1vp7a_ not modelled 6.4 12 Fold:Spectrin repeat-like Superfamily:XseB-like Family:XseB-like 77 c2h3oA_ not modelled 6.3 19 PDB header:membrane protein Chain: A: PDB Molecule:merf; PDBTitle: structure of merft, a membrane protein with two trans-2 membrane helices 78 c3ifzA_ not modelled 6.3 13 PDB header:isomerase Chain: A: PDB Molecule:dna gyrase subunit a; PDBTitle: crystal structure of the first part of the mycobacterium tuberculosis2 dna gyrase reaction core: the breakage and reunion domain at 2.7 a3 resolution 79 c2a93B_ not modelled 6.2 17 PDB header:leucine zippers Chain: B: PDB Molecule:c-myc-max heterodimeric leucine zipper; PDBTitle: nmr solution structure of the c-myc-max heterodimeric2 leucine zipper, 40 structures 80 c1rb6C_ not modelled 6.1 15 PDB header:dna binding protein Chain: C: PDB Molecule:general control protein gcn4; PDBTitle: antiparallel trimer of gcn4-leucine zipper core mutant as2 n16a tetragonal form 81 c3k7zA_ not modelled 6.1 15 PDB header:dna binding protein Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-leucine zipper core mutant as n16a trigonal automatic2 solution 82 c1rb1A_ not modelled 6.1 15 PDB header:dna binding protein Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-leucine zipper core mutant as n16a trigonal automatic2 solution 83 c3k7zB_ not modelled 6.1 15 PDB header:dna binding protein Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-leucine zipper core mutant as n16a trigonal automatic2 solution 84 c1rb1B_ not modelled 6.1 15 PDB header:dna binding protein Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-leucine zipper core mutant as n16a trigonal automatic2 solution 85 c1swiA_ not modelled 6.1 15 PDB header:leucine zipper Chain: A: PDB Molecule:gcn4p1; PDBTitle: gcn4-leucine zipper core mutant as n16a complexed with2 benzene 86 c1ij3B_ not modelled 5.9 15 PDB header:transcription Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-pvsl coiled-coil trimer with serine at the a(16)2 position 87 c1ij3C_ not modelled 5.9 15 PDB header:transcription Chain: C: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-pvsl coiled-coil trimer with serine at the a(16)2 position 88 c1dipA_ not modelled 5.9 13 PDB header:acetylation Chain: A: PDB Molecule:delta-sleep-inducing peptide immunoreactive PDBTitle: the solution structure of porcine delta-sleep-inducing2 peptide immunoreactive peptide, nmr, 10 structures 89 c2k6sB_ not modelled 5.9 21 PDB header:protein transport Chain: B: PDB Molecule:rab11fip2 protein; PDBTitle: structure of rab11-fip2 c-terminal coiled-coil domain 90 c2wl2B_ not modelled 5.8 10 PDB header:isomerase Chain: B: PDB Molecule:dna gyrase subunit a; PDBTitle: crystal structure of n-terminal domain of gyra with the2 antibiotic simocyclinone d8 91 c2pnvA_ not modelled 5.8 7 PDB header:membrane protein Chain: A: PDB Molecule:small conductance calcium-activated potassium PDBTitle: crystal structure of the leucine zipper domain of small-2 conductance ca2+-activated k+ (skca) channel from rattus3 norvegicus 92 c1kd8C_ not modelled 5.8 20 PDB header:de novo protein Chain: C: PDB Molecule:gcn4 acid base heterodimer acid-d12ia16v; PDBTitle: x-ray structure of the coiled coil gcn4 acid base2 heterodimer acid-d12ia16v base-d12la16l 93 c1kd8A_ not modelled 5.8 20 PDB header:de novo protein Chain: A: PDB Molecule:gcn4 acid base heterodimer acid-d12ia16v; PDBTitle: x-ray structure of the coiled coil gcn4 acid base2 heterodimer acid-d12ia16v base-d12la16l 94 c1kd8F_ not modelled 5.8 20 PDB header:de novo protein Chain: F: PDB Molecule:gcn4 acid base heterodimer acid-d12ia16v; PDBTitle: x-ray structure of the coiled coil gcn4 acid base2 heterodimer acid-d12ia16v base-d12la16l 95 c1ij2C_ not modelled 5.7 15 PDB header:transcription Chain: C: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-pvtl coiled-coil trimer with threonine at the a(16)2 position 96 d2jn6a1 not modelled 5.5 14 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Cgl2762-like 97 c3e98B_ not modelled 5.5 10 PDB header:unknown function Chain: B: PDB Molecule:gaf domain of unknown function; PDBTitle: crystal structure of a gaf domain containing protein that belongs to2 pfam duf484 family (pa5279) from pseudomonas aeruginosa at 2.43 a3 resolution 98 d1wmib1 not modelled 5.5 9 Fold:Non-globular all-alpha subunits of globular proteins Superfamily:RelB-like Family:RelB-like 99 d1vcsa1 not modelled 5.5 8 Fold:STAT-like Superfamily:t-snare proteins Family:t-snare proteins