PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c2lf0A_

Fold library id	PDB Header	Molecule	Title
c2lf0A_	PDB header: structural genomics, unknown function	Chain: A: PDB Molecule: uncharacterized protein yibl;	PDBTitle: solution structure of sf3636, a two-domain unknown function protein2 from shigella flexneri 2a, determined by joint refinement of nmr,3 residual dipolar couplings and small-angle x-ray scatting, nesg4 target sfr339/ocsp target sf3636

Links to external resources
Added to library: Sat Jul 16 09:26:54 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M K E V E K N E I K R L S D R L D A I R H Q Q A D L S L V E A A D K Y A E L E K E K A T L E A E I A R L R E V H S Q K L S K E A Q K L M K M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T T
T T T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120

Sequence P F Q R A I T K K E Q A D M G K L K K S V R G L V V V H P M T A L G R E M G L E E M T G F S K T T F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T T S
S S S T T
S S
S S

Download: PDB structure FASTA sequence
Hidden Markov model

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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	K	E	V	E	K	N	E	I	K	R	L	S	D	R	L	D	A	I	R	H	Q	Q	A	D	L	S	L	V	E	A	A	D	K	Y	A	E	L	E	K	E	K	A	T	L	E	A	E	I	A	R	L	R	E	V	H	S	Q	K	L	S	K	E	A	Q	K	L	M	K	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S																						S		T	T	T		T	T																										T										S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence	P	F	Q	R	A	I	T	K	K	E	Q	A	D	M	G	K	L	K	K	S	V	R	G	L	V	V	V	H	P	M	T	A	L	G	R	E	M	G	L	E	E	M	T	G	F	S	K	T	T	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S												T								T	T	S						S	S	S						T	T		S	S						S	S