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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c2iu9C_ | PDB header: transferase | Chain: C: PDB Molecule: udp-3-o-[3-hydroxymyristoyl] glucosamine | PDBTitle: chlamydia trachomatis lpxd with 100mm udpglcnac (complex ii) |
Added to library: Tue Mar 16 13:27:05 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | Q | S | T | Y | S | L | E | Q | L | A | D | F | L | K | V | E | F | Q | G | N | G | A | T | L | L | S | G | V | E | E | I | E | E | A | K | T | A | H | I | T | F | L | D | N | E | K | Y | A | K | H | L | K | S | S | E | A | G | A | I | I | I | S | R | T | Q | F | Q | K | Y | R |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | ![]() | ![]() | ![]() | S | T | T | ![]() | ![]() | ![]() | ![]() | T | T | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | S | T | T | G | G | G | T | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | D | L | N | K | N | F | L | I | T | S | E | S | P | S | L | V | F | Q | K | C | L | E | L | F | I | T | P | V | D | S | G | F | P | G | I | H | P | T | A | V | I | H | P | T | A | I | I | E | D | H | V | C | I | E | P | Y | A | V | V | C | Q | H | A | H | V | G | S | A | C | H |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | S | S | S | ![]() | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | S | S | B | T | T | ![]() | ![]() | T | T | ![]() | ![]() | T | T | ![]() | ![]() | T | T | ![]() | ![]() | T | T | ![]() | ![]() | T | T | ![]() |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence | I | G | S | G | S | V | I | G | A | Y | S | T | V | G | E | H | S | Y | I | H | P | R | V | V | I | R | E | R | V | S | I | G | K | R | V | I | I | Q | P | G | A | V | I | G | S | C | G | F | G | Y | V | T | S | A | F | G | Q | H | K | H | L | K | H | L | G | K | V | I | I | E |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | T | T | ![]() | ![]() | T | T | ![]() | ![]() | T | T | ![]() | ![]() | S | S | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | S | ![]() | ![]() | ![]() | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 |
Sequence | D | D | V | E | I | G | A | N | T | T | I | D | R | G | R | F | K | H | S | V | V | R | E | G | S | K | I | D | N | L | V | Q | I | A | H | Q | V | E | V | G | Q | H | S | M | I | V | A | Q | A | G | I | A | G | S | T | K | I | G | N | H | V | I | I | G | G | Q | A | G | I | T |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | S | S | S | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | T | T | ![]() | ![]() | T | T | ![]() | ![]() | T | T | ![]() | ![]() | T | T | ![]() | ![]() | T | T | ![]() | ![]() | T | T | ![]() | ![]() | T | T | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . |
Sequence | G | H | I | C | I | A | D | H | V | I | M | M | A | Q | T | G | V | T | K | S | I | T | S | P | G | I | Y | G | G | A | P | A | R | P | Y | Q | E | I | H | R | Q | V | A | K | V | R | N | L | P | R | L | E | E | R | I | A | A | L | E | K | L | V | Q | K | L | E | ||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | S | B | S | ![]() | ![]() | ![]() | ![]() | T | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | T |
Download: | PDB structure | FASTA sequence |
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