Email l.a.kelley@imperial.ac.uk Description P45757 Date Wed Jan 25 15:20:55 GMT 2012 Unique Job ID ad457e9f9dc0291a

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3stjC_ 100.0 15 PDB header:hydrolase Chain: C: PDB Molecule:protease degq; PDBTitle: crystal structure of the protease + pdz1 domain of degq from2 escherichia coli 2 c4a8aI_ 100.0 15 PDB header:hydrolase/hydrolase Chain: I: PDB Molecule:periplasmic ph-dependent serine endoprotease degq; PDBTitle: asymmetric cryo-em reconstruction of e. coli degq 12-mer in complex2 with lysozyme 3 c3pv5B_ 100.0 15 PDB header:hydrolase Chain: B: PDB Molecule:degq; PDBTitle: structure of legionella fallonii degq (n189g/p190g variant) 4 c1ky9A_ 100.0 13 PDB header:hydrolase Chain: A: PDB Molecule:protease do; PDBTitle: crystal structure of degp (htra) 5 c1lcyA_ 100.0 15 PDB header:hydrolase Chain: A: PDB Molecule:htra2 serine protease; PDBTitle: crystal structure of the mitochondrial serine protease htra2 6 c3gdsA_ 100.0 11 PDB header:hydrolase/hydrolase activator Chain: A: PDB Molecule:protease degs; PDBTitle: crystal structure of degs h198p/d320a mutant modified by dfp in2 complex with dnrdgnvyyf peptide 7 c3pv4A_ 100.0 15 PDB header:hydrolase Chain: A: PDB Molecule:degq; PDBTitle: structure of legionella fallonii degq (delta-pdz2 variant) 8 c3qo6B_ 100.0 12 PDB header:photosynthesis Chain: B: PDB Molecule:protease do-like 1, chloroplastic; PDBTitle: crystal structure analysis of the plant protease deg1 9 c2z9iB_ 100.0 12 PDB header:hydrolase Chain: B: PDB Molecule:probable serine protease pepd; PDBTitle: crystal structure of rv0983 from mycobacterium tuberculosis-2 proteolytically active form 10 c2r3yC_ 99.9 13 PDB header:hydrolase/hydrolase activator Chain: C: PDB Molecule:protease degs; PDBTitle: crystal structure of the degs protease in complex with the2 ywf activating peptide 11 d2i4sa1 99.8 20 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:EpsC C-terminal domain-like 12 d2i6va1 99.7 22 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:EpsC C-terminal domain-like 13 c2p3wB_ 99.6 19 PDB header:protein binding Chain: B: PDB Molecule:probable serine protease htra3; PDBTitle: crystal structure of the htra3 pdz domain bound to a phage-derived2 ligand (fgrwv) 14 c2joaA_ 99.6 18 PDB header:protein binding Chain: A: PDB Molecule:serine protease htra1; PDBTitle: htra1 bound to an optimized peptide: nmr assignment of pdz2 domain and ligand resonances 15 d1lcya1 99.6 17 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:HtrA-like serine proteases 16 d2z9ia1 99.5 13 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:HtrA-like serine proteases 17 d1ky9a1 99.5 11 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:HtrA-like serine proteases 18 c2kl1A_ 99.5 9 PDB header:protein binding Chain: A: PDB Molecule:ylbl protein; PDBTitle: solution structure of gtr34c from geobacillus thermodenitrificans.2 northeast structural genomics consortium target gtr34c 19 c3i18A_ 99.5 10 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:lmo2051 protein; PDBTitle: crystal structure of the pdz domain of the sdrc-like protein2 (lmo2051) from listeria monocytogenes, northeast structural3 genomics consortium target lmr166b 20 c2kjpA_ 99.4 8 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein ylbl; PDBTitle: solution structure of protein ylbl (bsu15050) from bacillus2 subtilis, northeast structural genomics consortium target3 sr713a 21 d1ky9a2 not modelled 99.4 14 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Prokaryotic proteases 22 c2rceI_ not modelled 99.3 13 PDB header:hydrolase Chain: I: PDB Molecule:protease degs; PDBTitle: dfp modified degs delta pdz 23 c3ossC_ not modelled 99.3 30 PDB header:protein transport Chain: C: PDB Molecule:type 2 secretion system, gspc; PDBTitle: the crystal structure of enterotoxigenic escherichia coli gspc-gspd2 complex from the type ii secretion system 24 d1sota1 not modelled 99.3 12 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:HtrA-like serine proteases 25 d2hgaa1 not modelled 99.3 16 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:MTH1368 C-terminal domain-like 26 d1ky9b2 not modelled 99.2 16 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:HtrA-like serine proteases 27 c3mmgB_ not modelled 99.2 9 PDB header:viral protein, hydrolase Chain: B: PDB Molecule:nuclear inclusion protein a; PDBTitle: crystal structure of tobacco vein mottling virus protease 28 d1fc6a3 not modelled 99.2 11 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:Tail specific protease PDZ domain 29 c3rleA_ not modelled 99.1 17 PDB header:membrane protein Chain: A: PDB Molecule:golgi reassembly-stacking protein 2; PDBTitle: crystal structure of grasp55 grasp domain (residues 7-208) 30 c2zplA_ not modelled 99.1 12 PDB header:hydrolase Chain: A: PDB Molecule:regulator of sigma e protease; PDBTitle: crystal structure analysis of pdz domain a 31 d1l1ja_ not modelled 99.1 15 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Prokaryotic proteases 32 c2zpmA_ not modelled 99.1 19 PDB header:hydrolase Chain: A: PDB Molecule:regulator of sigma e protease; PDBTitle: crystal structure analysis of pdz domain b 33 d1q31a_ not modelled 99.1 11 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Viral proteases 34 d2qf3a1 not modelled 99.0 14 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Prokaryotic proteases 35 d2z9ia2 not modelled 98.9 12 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Prokaryotic proteases 36 d1lvmb_ not modelled 98.9 11 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Viral proteases 37 c3nwuB_ not modelled 98.8 15 PDB header:hydrolase Chain: B: PDB Molecule:serine protease htra1; PDBTitle: substrate induced remodeling of the active site regulates htra12 activity 38 c3nziA_ not modelled 98.8 13 PDB header:hydrolase/hydrolase substrate Chain: A: PDB Molecule:serine protease htra1; PDBTitle: substrate induced remodeling of the active site regulates htra12 activity 39 c2yuyA_ not modelled 98.8 16 PDB header:signaling protein Chain: A: PDB Molecule:rho gtpase activating protein 21; PDBTitle: solution structure of pdz domain of rho gtpase activating2 protein 21 40 c3stiC_ not modelled 98.8 15 PDB header:hydrolase Chain: C: PDB Molecule:protease degq; PDBTitle: crystal structure of the protease domain of degq from escherichia coli 41 c2eaqA_ not modelled 98.8 22 PDB header:metal binding protein Chain: A: PDB Molecule:lim domain only protein 7; PDBTitle: crystal structure of pdz domain of kiaa0858 (lim), ms07932 from homo sapiens 42 d1qtfa_ not modelled 98.7 10 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Prokaryotic proteases 43 d1wifa_ not modelled 98.7 20 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 44 d1x5qa1 not modelled 98.7 18 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 45 c3shuB_ not modelled 98.6 20 PDB header:cell adhesion Chain: B: PDB Molecule:tight junction protein zo-1; PDBTitle: crystal structure of zo-1 pdz3 46 d1wfga_ not modelled 98.6 22 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 47 c2b0fA_ not modelled 98.6 3 PDB header:hydrolase/hydrolase inhibitor Chain: A: PDB Molecule:picornain 3c (protease 3c) (p3c); PDBTitle: nmr structure of the human rhinovirus 3c protease (serotype 14) with2 covalently bound ace-lealfq-ethylpropionate inhibitor 48 c3diwB_ not modelled 98.6 16 PDB header:signaling protein/cell adhesion Chain: B: PDB Molecule:tax1-binding protein 3; PDBTitle: c-terminal beta-catenin bound tip-1 structure 49 c3l4fD_ not modelled 98.6 10 PDB header:signaling protein/protein binding Chain: D: PDB Molecule:sh3 and multiple ankyrin repeat domains protein PDBTitle: crystal structure of betapix coiled-coil domain and shank2 pdz complex 50 c2krgA_ not modelled 98.6 13 PDB header:signaling protein Chain: A: PDB Molecule:na(+)/h(+) exchange regulatory cofactor nhe-rf1; PDBTitle: solution structure of human sodium/ hydrogen exchange2 regulatory factor 1(150-358) 51 c2komA_ not modelled 98.6 15 PDB header:signaling protein Chain: A: PDB Molecule:partitioning defective 3 homolog; PDBTitle: solution structure of humar par-3b pdz2 (residues 451-549) 52 d1ueqa_ not modelled 98.6 16 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 53 c2q3gA_ not modelled 98.6 10 PDB header:structural genomics Chain: A: PDB Molecule:pdz and lim domain protein 7; PDBTitle: structure of the pdz domain of human pdlim7 bound to a c-2 terminal extension from human beta-tropomyosin 54 d1q3oa_ not modelled 98.6 11 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 55 d1rgwa_ not modelled 98.6 12 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 56 d1m5za_ not modelled 98.6 17 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 57 c2eehA_ not modelled 98.6 22 PDB header:metal binding protein Chain: A: PDB Molecule:pdz domain-containing protein 7; PDBTitle: solution structure of first pdz domain of pdz domain2 containing protein 7 58 d2f5ya1 not modelled 98.5 17 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 59 d1ozia_ not modelled 98.5 18 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 60 c2kjdA_ not modelled 98.5 12 PDB header:signaling protein Chain: A: PDB Molecule:sodium/hydrogen exchange regulatory cofactor nhe- PDBTitle: solution structure of extended pdz2 domain from nherf1 (150-2 270) 61 d1uf1a_ not modelled 98.5 22 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 62 d1lcya2 not modelled 98.5 14 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Prokaryotic proteases 63 c3khfA_ not modelled 98.5 13 PDB header:transferase Chain: A: PDB Molecule:microtubule-associated serine/threonine-protein PDBTitle: the crystal structure of the pdz domain of human microtubule2 associated serine/threonine kinase 3 (mast3) 64 c3shwA_ not modelled 98.5 21 PDB header:cell adhesion Chain: A: PDB Molecule:tight junction protein zo-1; PDBTitle: crystal structure of zo-1 pdz3-sh3-guk supramodule complex with2 connexin-45 peptide 65 d1p1da2 not modelled 98.5 23 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 66 c2vwrA_ not modelled 98.5 24 PDB header:protein-binding Chain: A: PDB Molecule:ligand of numb protein x 2; PDBTitle: crystal structure of the second pdz domain of numb-binding2 protein 2 67 c2v90E_ not modelled 98.5 13 PDB header:protein-binding Chain: E: PDB Molecule:pdz domain-containing protein 3; PDBTitle: crystal structure of the 3rd pdz domain of intestine- and2 kidney-enriched pdz domain ikepp (pdzd3) 68 c2w5eB_ not modelled 98.5 9 PDB header:hydrolase Chain: B: PDB Molecule:putative serine protease; PDBTitle: structural and biochemical analysis of human pathogenic2 astrovirus serine protease at 2.0 angstrom resolution 69 c2qt5A_ not modelled 98.5 18 PDB header:peptide binding protein Chain: A: PDB Molecule:glutamate receptor-interacting protein 1; PDBTitle: crystal structure of grip1 pdz12 in complex with the fras12 peptide 70 d1t2ma1 not modelled 98.5 18 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 71 d2fe5a1 not modelled 98.5 22 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 72 c3k6zA_ not modelled 98.5 14 PDB header:hydrolase Chain: A: PDB Molecule:possible membrane-associated serine protease; PDBTitle: crystal structure of rv3671c protease, inactive form 73 d1ihja_ not modelled 98.5 13 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 74 c2egkC_ not modelled 98.5 12 PDB header:protein binding Chain: C: PDB Molecule:general receptor for phosphoinositides 1- PDBTitle: crystal structure of tamalin pdz-intrinsic ligand fusion2 protein 75 c1p1dA_ not modelled 98.5 22 PDB header:protein binding Chain: A: PDB Molecule:glutamate receptor interacting protein; PDBTitle: structural insights into the inter-domain chaperoning of2 tandem pdz domains in glutamate receptor interacting3 proteins 76 c2v1wB_ not modelled 98.5 14 PDB header:structural protein Chain: B: PDB Molecule:pdz and lim domain protein 4; PDBTitle: crystal structure of human lim protein ril (pdlim4) pdz2 domain bound to the c-terminal peptide of human alpha-3 actinin-1 77 d1wf7a_ not modelled 98.5 16 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 78 d2cssa1 not modelled 98.5 18 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 79 d1w9ea1 not modelled 98.4 21 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 80 c1u38A_ not modelled 98.4 21 PDB header:protein transport Chain: A: PDB Molecule:amyloid beta a4 precursor protein-binding, PDBTitle: auto-inhibition mechanism of x11s/mints family scaffold2 proteins revealed by the closed conformation of the tandem3 pdz domains 81 c3qglD_ not modelled 98.4 13 PDB header:protein binding Chain: D: PDB Molecule:sorting nexin-27; PDBTitle: crystal structure of pdz domain of sorting nexin 27 (snx27) in complex2 with the eseskv peptide corresponding to the c-terminal tail of girk3 82 d1q7xa_ not modelled 98.4 20 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 83 c2dm8A_ not modelled 98.4 21 PDB header:protein binding Chain: A: PDB Molecule:inad-like protein; PDBTitle: solution structure of the eighth pdz domain of human inad-2 like protein 84 c2o2tB_ not modelled 98.4 22 PDB header:structural protein Chain: B: PDB Molecule:multiple pdz domain protein; PDBTitle: the crystal structure of the 1st pdz domain of mpdz 85 d1p1da1 not modelled 98.4 16 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 86 c1u37A_ not modelled 98.4 21 PDB header:protein transport Chain: A: PDB Molecule:amyloid beta a4 precursor protein-binding, PDBTitle: auto-inhibition mechanism of x11s/mints family scaffold2 proteins revealed by the closed conformation of the tandem3 pdz domains 87 d1wf8a1 not modelled 98.4 20 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 88 d2byga1 not modelled 98.4 22 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 89 c3eggC_ not modelled 98.4 20 PDB header:hydrolase Chain: C: PDB Molecule:spinophilin; PDBTitle: crystal structure of a complex between protein phosphatase 1 alpha2 (pp1) and the pp1 binding and pdz domains of spinophilin 90 c2ogpA_ not modelled 98.4 17 PDB header:signaling protein Chain: A: PDB Molecule:partitioning-defective 3 homolog; PDBTitle: solution structure of the second pdz domain of par-3 91 c2iwnA_ not modelled 98.4 18 PDB header:signaling protein Chain: A: PDB Molecule:multiple pdz domain protein; PDBTitle: 3rd pdz domain of multiple pdz domain protein mpdz (casp2 target) 92 c2he4A_ not modelled 98.4 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:na(+)/h(+) exchange regulatory cofactor nhe-rf2; PDBTitle: the crystal structure of the second pdz domain of human2 nherf-2 (slc9a3r2) interacting with a mode 1 pdz binding3 motif 93 c2gzvA_ not modelled 98.4 11 PDB header:signaling protein Chain: A: PDB Molecule:prkca-binding protein; PDBTitle: the cystal structure of the pdz domain of human pick1 (casp target) 94 c2omjA_ not modelled 98.4 18 PDB header:cell adhesion Chain: A: PDB Molecule:rho guanine nucleotide exchange factor 12; PDBTitle: solution structure of larg pdz domain 95 c3cyyA_ not modelled 98.4 13 PDB header:peptide binding protein Chain: A: PDB Molecule:tight junction protein zo-1; PDBTitle: the crystal structure of zo-1 pdz2 in complex with the cx43 peptide 96 d1uhpa_ not modelled 98.4 17 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 97 c2i04B_ not modelled 98.4 13 PDB header:peptide binding protein Chain: B: PDB Molecule:membrane-associated guanylate kinase, ww and pdz PDBTitle: x-ray crystal structure of magi-1 pdz1 bound to the c-2 terminal peptide of hpv18 e6 98 c2osgB_ not modelled 98.4 18 PDB header:cell adhesion Chain: B: PDB Molecule:tight junction protein zo-2; PDBTitle: solution structure and binding property of the domain-2 swapped dimer of zo2pdz2 99 c2jilA_ not modelled 98.4 15 PDB header:membrane protein Chain: A: PDB Molecule:glutamate receptor interacting protein-1; PDBTitle: crystal structure of 2nd pdz domain of glutamate receptor2 interacting protein-1 (grip1) 100 d1ry4a_ not modelled 98.4 14 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 101 d1d5ga_ not modelled 98.4 20 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 102 c2ka9A_ not modelled 98.4 19 PDB header:cell adhesion Chain: A: PDB Molecule:disks large homolog 4; PDBTitle: solution structure of psd-95 pdz12 complexed with cypin2 peptide 103 c2z17A_ not modelled 98.4 13 PDB header:protein binding Chain: A: PDB Molecule:pleckstrin homology sec7 and coiled-coil domains- PDBTitle: crystal sturcture of pdz domain from human pleckstrin2 homology, sec7 104 d1g9oa_ not modelled 98.4 9 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 105 c2jreA_ not modelled 98.4 15 PDB header:de novo protein Chain: A: PDB Molecule:c60-1 pdz domain peptide; PDBTitle: c60-1, a pdz domain designed using statistical coupling2 analysis 106 c2iwoA_ not modelled 98.4 14 PDB header:signaling protein Chain: A: PDB Molecule:multiple pdz domain protein; PDBTitle: 12th pdz domain of multiple pdz domain protein mpdz (casp2 target) 107 c2vsvB_ not modelled 98.3 11 PDB header:protein-binding Chain: B: PDB Molecule:rhophilin-2; PDBTitle: crystal structure of the pdz domain of human rhophilin-2 108 c3r0hA_ not modelled 98.3 16 PDB header:peptide binding protein Chain: A: PDB Molecule:inactivation-no-after-potential d protein; PDBTitle: structure of inad pdz45 in complex with ng2 peptide 109 c2k1zA_ not modelled 98.3 19 PDB header:signaling protein Chain: A: PDB Molecule:partitioning-defective 3 homolog; PDBTitle: solution structure of par-3 pdz3 110 d1qaua_ not modelled 98.3 18 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 111 d1b8qa_ not modelled 98.3 21 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 112 c2jxoA_ not modelled 98.3 9 PDB header:protein binding Chain: A: PDB Molecule:ezrin-radixin-moesin-binding phosphoprotein 50; PDBTitle: structure of the second pdz domain of nherf-1 113 d1um1a_ not modelled 98.3 18 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 114 d1uepa_ not modelled 98.3 15 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 115 c3k1rA_ not modelled 98.3 23 PDB header:structural protein Chain: A: PDB Molecule:harmonin; PDBTitle: structure of harmonin npdz1 in complex with the sam-pbm of2 sans 116 c2jikB_ not modelled 98.3 17 PDB header:membrane protein Chain: B: PDB Molecule:synaptojanin-2 binding protein; PDBTitle: crystal structure of pdz domain of synaptojanin-2 binding2 protein 117 d1whda_ not modelled 98.3 16 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 118 d1wh1a_ not modelled 98.3 16 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 119 c3ggeA_ not modelled 98.3 13 PDB header:protein binding Chain: A: PDB Molecule:pdz domain-containing protein gipc2; PDBTitle: crystal structure of the pdz domain of pdz domain-containing protein2 gipc2 120 d1x5ra1 not modelled 98.3 17 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain