Emaill.a.kelley@imperial.ac.uk
DescriptionP76148
DateThu Jan 5 12:19:42 GMT 2012
Unique Job IDa7671a05e664c9cc

Detailed template information 

#Template Alignment Coverage3D Model Confidence% i.d. Template Information
1c3fybA_



80.6 50 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:protein of unknown function (duf1244);
PDBTitle: crystal structure of a protein of unknown function (duf1244) from2 alcanivorax borkumensis
2c2o35A_



78.4 46 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein duf1244;
PDBTitle: protein of unknown function (duf1244) from sinorhizobium meliloti
3d2o35a1



78.4 46 Fold:SMc04008-like
Superfamily:SMc04008-like
Family:SMc04008-like
4c2ogeC_



48.0 20 PDB header:transferase
Chain: C: PDB Molecule:transaminase;
PDBTitle: x-ray structure of s. venezuelae desv in its internal2 aldimine form
5c3uwcA_



46.8 23 PDB header:transferase
Chain: A: PDB Molecule:nucleotide-sugar aminotransferase;
PDBTitle: structure of an aminotransferase (degt-dnrj-eryc1-strs family) from2 coxiella burnetii in complex with pmp
6c3frkB_



44.7 27 PDB header:transferase
Chain: B: PDB Molecule:qdtb;
PDBTitle: x-ray structure of qdtb from t. thermosaccharolyticum in2 complex with a plp:tdp-3-aminoquinovose aldimine
7c3htkC_



35.8 17 PDB header:recombination/replication/ligase
Chain: C: PDB Molecule:e3 sumo-protein ligase mms21;
PDBTitle: crystal structure of mms21 and smc5 complex
8d1o69a_



34.9 21 Fold:PLP-dependent transferase-like
Superfamily:PLP-dependent transferases
Family:GABA-aminotransferase-like
9c3bcxA_



34.3 16 PDB header:transferase
Chain: A: PDB Molecule:cdp-6-deoxy-l-threo-d-glycero-4-hexulose-3-
PDBTitle: e1 dehydrase
10d1wpba_



33.9 27 Fold:YfbU-like
Superfamily:YfbU-like
Family:YfbU-like
11c3nysA_



26.8 17 PDB header:transferase
Chain: A: PDB Molecule:aminotransferase wbpe;
PDBTitle: x-ray structure of the k185a mutant of wbpe (wlbe) from pseudomonas2 aeruginosa in complex with plp at 1.45 angstrom resolution
12d1hj3a1



26.5 29 Fold:Cytochrome c
Superfamily:Cytochrome c
Family:N-terminal (heme c) domain of cytochrome cd1-nitrite reductase
13c2po3B_



25.9 12 PDB header:transferase
Chain: B: PDB Molecule:4-dehydrase;
PDBTitle: crystal structure analysis of desi in the presence of its2 tdp-sugar product
14c2k6vA_



25.8 18 PDB header:electron transport
Chain: A: PDB Molecule:putative cytochrome c oxidase assembly protein;
PDBTitle: solution structures of apo sco1 protein from thermus2 thermophilus
15c3ju7B_



24.0 21 PDB header:transferase
Chain: B: PDB Molecule:putative plp-dependent aminotransferase;
PDBTitle: crystal structure of putative plp-dependent aminotransferase2 (np_978343.1) from bacillus cereus atcc 10987 at 2.19 a resolution
16d2fnua1



22.5 17 Fold:PLP-dependent transferase-like
Superfamily:PLP-dependent transferases
Family:GABA-aminotransferase-like
17c2rliA_



22.4 30 PDB header:metal transport
Chain: A: PDB Molecule:sco2 protein homolog, mitochondrial;
PDBTitle: solution structure of cu(i) human sco2
18c2kvcA_



22.1 11 PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: solution structure of the mycobacterium tuberculosis protein rv0543c,2 a member of the duf3349 superfamily. seattle structural genomics3 center for infectious disease target mytud.17112.a
19c2r0tA_



20.5 11 PDB header:transferase
Chain: A: PDB Molecule:pyridoxamine 5-phosphate-dependent dehydrase;
PDBTitle: crystal sructure of gdp-4-keto-6-deoxymannose-3-dehydratase2 with a trapped plp-glutamate geminal diamine
20c1jiwP_



20.5 35 PDB header:hydrolase/hyrolase inhibitor
Chain: P: PDB Molecule:alkaline metalloproteinase;
PDBTitle: crystal structure of the apr-aprin complex
21c3gxqB_



not modelled 18.0 25 PDB header:dna binding protein/dna
Chain: B: PDB Molecule:putative regulator of transfer genes arta;
PDBTitle: structure of arta and dna complex
22d1riea_



not modelled 18.0 25 Fold:ISP domain
Superfamily:ISP domain
Family:Rieske iron-sulfur protein (ISP)
23c2kreA_



not modelled 17.2 25 PDB header:protein binding
Chain: A: PDB Molecule:ubiquitin conjugation factor e4 b;
PDBTitle: solution structure of e4b/ufd2a u-box domain
24c2nvgA_



not modelled 16.1 20 PDB header:oxidoreductase
Chain: A: PDB Molecule:ubiquinol-cytochrome c reductase iron-sulfur subunit;
PDBTitle: soluble domain of rieske iron sulfur protein.
25c2k0mA_



not modelled 14.9 12 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution nmr structure of the uncharacterized protein from2 rhodospirillum rubrum gene locus rru_a0810. northeast3 structural genomics target rrr43
26d1wgma_



not modelled 14.6 24 Fold:RING/U-box
Superfamily:RING/U-box
Family:U-box
27c2b7kD_



not modelled 14.3 22 PDB header:metal binding protein
Chain: D: PDB Molecule:sco1 protein;
PDBTitle: crystal structure of yeast sco1
28d2k4xa1



not modelled 14.2 61 Fold:Rubredoxin-like
Superfamily:Zn-binding ribosomal proteins
Family:Ribosomal protein S27a
29c1vsy7_



not modelled 13.0 13 PDB header:hydrolase
Chain: 7: PDB Molecule:proteasome activator blm10;
PDBTitle: proteasome activator complex
30c2lkyA_



not modelled 12.5 11 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution structure of msmeg_1053, the second duf3349 annotated protein2 in the genome of mycobacterium smegmatis, seattle structural genomics3 center for infectious disease target mysma.17112.b
31d1khda1



not modelled 12.3 22 Fold:Methionine synthase domain-like
Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
32c2zxyA_



not modelled 12.1 15 PDB header:oxygen binding, transport protein
Chain: A: PDB Molecule:cytochrome c552;
PDBTitle: crystal structure of cytochrome c555 from aquifex aeolicus
33c2f42A_



not modelled 12.0 20 PDB header:chaperone
Chain: A: PDB Molecule:stip1 homology and u-box containing protein 1;
PDBTitle: dimerization and u-box domains of zebrafish c-terminal of hsp702 interacting protein
34c2juhA_



not modelled 11.7 17 PDB header:nuclear protein
Chain: A: PDB Molecule:telomere binding protein tbp1;
PDBTitle: solution structure of dna binding domain of ngtrf1
35c3n92A_



not modelled 11.5 30 PDB header:transferase
Chain: A: PDB Molecule:alpha-amylase, gh57 family;
PDBTitle: crystal structure of tk1436, a gh57 branching enzyme from2 hyperthermophilic archaeon thermococcus kodakaraensis, in complex3 with glucose
36c2ecyA_



not modelled 11.4 38 PDB header:apoptosis
Chain: A: PDB Molecule:tnf receptor-associated factor 3;
PDBTitle: solution structure of the zinc finger, c3hc4 type (ring2 finger)" domain of tnf receptor-associated factor 3
37d1h8ba_



not modelled 11.2 23 Fold:EF Hand-like
Superfamily:EF-hand
Family:EF-hand modules in multidomain proteins
38c2i6hA_



not modelled 11.1 18 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein atu0120;
PDBTitle: structure of protein of unknown function atu0120 from agrobacterium2 tumefaciens
39d2i6ha1



not modelled 11.1 18 Fold:alpha-alpha superhelix
Superfamily:TPR-like
Family:Atu0120-like
40c2d8tA_



not modelled 10.7 20 PDB header:metal binding protein
Chain: A: PDB Molecule:ring finger protein 146;
PDBTitle: solution structure of the ring domain of the human ring2 finger protein 146
41c3jqoH_



not modelled 10.6 11 PDB header:transport protein
Chain: H: PDB Molecule:trao protein;
PDBTitle: crystal structure of the outer membrane complex of a type iv2 secretion system
42c2ofqA_



not modelled 10.6 11 PDB header:protein transport/protein transport
Chain: A: PDB Molecule:trao;
PDBTitle: nmr solution structure of a complex between the virb9/virb72 interaction domains of the pkm101 type iv secretion system
43c3ol4B_



not modelled 10.3 24 PDB header:unknown function
Chain: B: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of a putative uncharacterized protein from2 mycobacterium smegmatis, an ortholog of rv0543c
44d1w0ba_



not modelled 10.2 19 Fold:Spectrin repeat-like
Superfamily:Alpha-hemoglobin stabilizing protein AHSP
Family:Alpha-hemoglobin stabilizing protein AHSP
45d2e7ja1



not modelled 10.2 21 Fold:PLP-dependent transferase-like
Superfamily:PLP-dependent transferases
Family:SepSecS-like
46c2cklA_



not modelled 10.1 20 PDB header:transcription
Chain: A: PDB Molecule:polycomb group ring finger protein 4;
PDBTitle: ring1b-bmi1 e3 catalytic domain structure
47d1wp0a1



not modelled 10.0 26 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Glutathione peroxidase-like
48d2c2vv1



not modelled 9.9 18 Fold:RING/U-box
Superfamily:RING/U-box
Family:U-box
49c3fl2A_



not modelled 9.8 30 PDB header:ligase
Chain: A: PDB Molecule:e3 ubiquitin-protein ligase uhrf1;
PDBTitle: crystal structure of the ring domain of the e3 ubiquitin-2 protein ligase uhrf1
50d1z8ua1



not modelled 9.8 19 Fold:Spectrin repeat-like
Superfamily:Alpha-hemoglobin stabilizing protein AHSP
Family:Alpha-hemoglobin stabilizing protein AHSP
51c2cklB_



not modelled 9.8 17 PDB header:transcription
Chain: B: PDB Molecule:ubiquitin ligase protein ring2;
PDBTitle: ring1b-bmi1 e3 catalytic domain structure
52c2ecnA_



not modelled 9.7 50 PDB header:metal binding protein
Chain: A: PDB Molecule:ring finger protein 141;
PDBTitle: solution structure of the ring domain of the human ring2 finger protein 141
53d1rmda2



not modelled 9.5 38 Fold:RING/U-box
Superfamily:RING/U-box
Family:RING finger domain, C3HC4
54d1a56a_



not modelled 9.5 19 Fold:Cytochrome c
Superfamily:Cytochrome c
Family:monodomain cytochrome c
55d1t1ha_



not modelled 9.5 38 Fold:RING/U-box
Superfamily:RING/U-box
Family:U-box
56c3dr4B_



not modelled 9.5 22 PDB header:transferase
Chain: B: PDB Molecule:putative perosamine synthetase;
PDBTitle: gdp-perosamine synthase k186a mutant from caulobacter2 crescentus with bound sugar ligand
57c2djbA_



not modelled 9.4 30 PDB header:gene regulation
Chain: A: PDB Molecule:polycomb group ring finger protein 6;
PDBTitle: solution structure of the ring domain of the human polycomb2 group ring finger protein 6
58c2kveA_



not modelled 9.4 57 PDB header:hormone
Chain: A: PDB Molecule:mesencephalic astrocyte-derived neurotrophic factor;
PDBTitle: c-terminal domain of mesencephalic astrocyte-derived neurotrophic2 factor (manf)
59c3bijC_



not modelled 9.4 38 PDB header:structural genomics, unknown function
Chain: C: PDB Molecule:uncharacterized protein gsu0716;
PDBTitle: crystal structure of protein gsu0716 from geobacter2 sulfurreducens. northeast structural genomics target gsr13
60c2ecwA_



not modelled 9.3 30 PDB header:apoptosis
Chain: A: PDB Molecule:tripartite motif-containing protein 30;
PDBTitle: solution structure of the zinc finger, c3hc4 type (ring2 finger) domain tripartite motif protein 30
61c2eciA_



not modelled 9.2 30 PDB header:metal binding protein
Chain: A: PDB Molecule:tnf receptor-associated factor 6;
PDBTitle: solution structure of the ring domain of the human tnf2 receptor-associated factor 6 protein
62d2tpta1



not modelled 9.1 33 Fold:Methionine synthase domain-like
Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
63d1ur6b_



not modelled 8.8 38 Fold:RING/U-box
Superfamily:RING/U-box
Family:RING finger domain, C3HC4
64d3cx5e1



not modelled 8.6 35 Fold:ISP domain
Superfamily:ISP domain
Family:Rieske iron-sulfur protein (ISP)
65c2ecjA_



not modelled 8.6 18 PDB header:metal binding protein
Chain: A: PDB Molecule:tripartite motif-containing protein 39;
PDBTitle: solution structure of the ring domain of the human2 tripartite motif-containing protein 39
66c2w9vA_



not modelled 8.5 63 PDB header:toxin
Chain: A: PDB Molecule:short disintegrin jerdostatin;
PDBTitle: solution structure of jerdostatin from trimeresurus2 jerdonii with end c-terminal residues n45g46 deleted
67c2y43B_



not modelled 8.2 30 PDB header:ligase
Chain: B: PDB Molecule:e3 ubiquitin-protein ligase rad18;
PDBTitle: rad18 ubiquitin ligase ring domain structure
68c4a5bA_



not modelled 8.1 19 PDB header:hydrolase
Chain: A: PDB Molecule:nucleoside-triphosphatase 2;
PDBTitle: crystal structure of the c258s/c268s variant of toxoplasma gondii2 nucleoside triphosphate diphosphohydrolase 1 (ntpdase1)
69d1jm7a_



not modelled 8.0 38 Fold:RING/U-box
Superfamily:RING/U-box
Family:RING finger domain, C3HC4
70d2elca1



not modelled 7.9 24 Fold:Methionine synthase domain-like
Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
71d2b7ka1



not modelled 7.8 22 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Glutathione peroxidase-like
72c3ztgA_



not modelled 7.7 20 PDB header:ligase
Chain: A: PDB Molecule:e3 ubiquitin-protein ligase rbbp6;
PDBTitle: solution structure of the ring finger-like domain of2 retinoblastoma binding protein-6 (rbbp6)
73c2y3aB_



not modelled 7.7 28 PDB header:transferase
Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit beta;
PDBTitle: crystal structure of p110beta in complex with icsh2 of p85beta and2 the drug gdc-0941
74d1uoua1



not modelled 7.6 37 Fold:Methionine synthase domain-like
Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
75c3l11A_



not modelled 7.5 25 PDB header:ligase
Chain: A: PDB Molecule:e3 ubiquitin-protein ligase rnf168;
PDBTitle: crystal structure of the ring domain of rnf168
76d1ng7a_



not modelled 7.4 56 Fold:Soluble domain of poliovirus core protein 3a
Superfamily:Soluble domain of poliovirus core protein 3a
Family:Soluble domain of poliovirus core protein 3a
77d2cwqa1



not modelled 7.3 19 Fold:AhpD-like
Superfamily:AhpD-like
Family:TTHA0727-like
78c2h0dB_



not modelled 7.2 25 PDB header:metal binding protein/ligase
Chain: B: PDB Molecule:ubiquitin ligase protein ring2;
PDBTitle: structure of a bmi-1-ring1b polycomb group ubiquitin ligase complex
79c3sqgG_



not modelled 7.2 50 PDB header:transferase
Chain: G: PDB Molecule:methyl coenzyme m reductase, alpha subunit;
PDBTitle: crystal structure of a methyl-coenzyme m reductase purified from black2 sea mats
80d1k78a1



not modelled 7.1 22 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Paired domain
81c2yu4A_



not modelled 7.1 0 PDB header:apoptosis
Chain: A: PDB Molecule:e3 sumo-protein ligase nse2;
PDBTitle: solution structure of the sp-ring domain in non-smc element2 2 homolog (mms21, s. cerevisiae)
82d1v8ga1



not modelled 6.9 24 Fold:Methionine synthase domain-like
Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
83c2csyA_



not modelled 6.8 25 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:zinc finger protein 183-like 1;
PDBTitle: solution structure of the ring domain of the zinc finger2 protein 183-like 1
84c1tr6A_



not modelled 6.7 80 PDB header:toxin
Chain: A: PDB Molecule:omega-conotoxin gvia;
PDBTitle: nmr solution structure of omega-conotoxin [k10]gvia, a cyclic cysteine2 knot peptide
85c1omcA_



not modelled 6.7 80 PDB header:presynaptic neurotoxin
Chain: A: PDB Molecule:omega-conotoxin gvia;
PDBTitle: solution structure of omega-conotoxin gvia using 2-d nmr2 spectroscopy and relaxation matrix analysis
86c2ccoA_



not modelled 6.7 80 PDB header:toxin
Chain: A: PDB Molecule:omega-conotoxin gvia;
PDBTitle: structure of the calcium channel blocker omega conotoxin2 gvia, nmr, 20 structures
87d1omca_



not modelled 6.7 80 Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:omega toxin-like
Family:Conotoxin
88c1ttlA_



not modelled 6.7 80 PDB header:toxin
Chain: A: PDB Molecule:omega-conotoxin gvia;
PDBTitle: omega-conotoxin gvia, a n-type calcium channel blocker
89c3tqcB_



not modelled 6.7 26 PDB header:transferase
Chain: B: PDB Molecule:pantothenate kinase;
PDBTitle: structure of the pantothenate kinase (coaa) from coxiella burnetii
90d1vyxa_



not modelled 6.6 50 Fold:RING/U-box
Superfamily:RING/U-box
Family:Variant RING domain
91d1st9a_



not modelled 6.6 21 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Glutathione peroxidase-like
92c3knvA_



not modelled 6.5 50 PDB header:signaling protein
Chain: A: PDB Molecule:tnf receptor-associated factor 2;
PDBTitle: crystal structure of the ring and first zinc finger domains2 of traf2
93d1c75a_



not modelled 6.4 16 Fold:Cytochrome c
Superfamily:Cytochrome c
Family:monodomain cytochrome c
94d2b5xa1



not modelled 6.4 24 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Glutathione peroxidase-like
95c1nhgD_



not modelled 6.3 10 PDB header:oxidoreductase
Chain: D: PDB Molecule:enoyl-acyl carrier reductase;
PDBTitle: crystal structure analysis of plasmodium falciparum enoyl-2 acyl-carrier-protein reductase with triclosan
96c3f6oB_



not modelled 6.3 12 PDB header:transcription regulator
Chain: B: PDB Molecule:probable transcriptional regulator, arsr family
PDBTitle: crystal structure of arsr family transcriptional regulator,2 rha00566
97c2oixA_



not modelled 6.3 36 PDB header:hydrolase
Chain: A: PDB Molecule:xanthomonas outer protein d;
PDBTitle: xanthomonas xopd c470a mutant
98d1gp1a_



not modelled 6.2 22 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Glutathione peroxidase-like
99c3jvbA_



not modelled 6.2 83 PDB header:viral protein
Chain: A: PDB Molecule:polyhedrin;
PDBTitle: crystal structure of infectious baculovirus polyhedra