Fold library entry viewer: c1vsy7_

Added to library: Sat Aug 28 20:23:35 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	V	N	H	W	T	N	E	L	K	N	C	L	H	F	D	F	P	V	A	L	R	K	S	L	A	T	V	Y	Y	Y	L	S	L	V	Q	G	Q	K	V	Y	R	Q	M	H	V	D	M	F	E	R	L	V	S	L	D	D	D	R	T	Q	F	T	E	L	L	Q	K	Q	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											G	G	G	G	S																			T			S	S															S		S		B	T	T	B									T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	L	L	D	H	Q	I	M	L	N	F	L	C	E	F	L	P	Y	P	D	P	D	Y	A	R	Y	E	L	S	S	K	E	D	L	Q	L	F	R	L	L	L	K	H	A	H	N	A	K	P	F	F	D	K	S	K	E	S	L	L	V	D	T	M	N	F	L	L	S	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	T	T	S			S	S	T	T	T					T	T	S	T	T	T														T	S	T	T	S		T	T		G	G	G									G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	P	S	T	M	M	A	V	M	P	I	V	T	S	V	V	P	Y	H	Y	H	I	H	S	K	I	I	D	Y	F	P	F	C	Y	S	I	W	S	S	V	S	A	N	V	A	I	D	T	H	M	Y	D	F	V	G	S	I	S	K	D	V	H	N	K	I	L	S	S	E	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T	T	T												S						S	S			S	G	G	G								T	T	T	S		S																								S	S	S		S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	E	K	D	V	V	G	V	E	F	G	E	F	G	I	F	T	D	D	Q	M	T	F	M	F	N	R	L	Q	G	H	L	R	T	D	G	Q	I	H	S	Y	S	R	T	V	K	P	F	V	Y	A	I	N	G	S	K	K	D	R	F	F	E	K	L	V	S	L	A	K	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T				S				S	S	T	T																			T	T				S	S	T									T	T			T	T	S		T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	E	T	F	I	H	P	S	N	N	G	F	W	T	K	P	N	A	K	F	V	H	A	F	I	K	S	Y	H	G	R	V	K	Y	E	E	D	I	C	A	R	G	V	T	N	G	I	C	L	T	S	F	C	H	E	E	I	V	E	I	F	L	N	I	I	S	L	G	S	Q	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	T	T			S	T	T																							T	T	T	T	T	T	T				S	S	S																					T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	K	N	P	D	I	A	N	Y	Y	I	S	C	F	A	Y	L	L	E	L	D	P	S	N	A	Y	L	I	Y	D	K	I	L	I	D	L	Y	D	T	L	A	D	Q	F	I	N	S	R	H	R	I	I	S	S	L	K	Q	F	T	R	V	I	R	F	I	V	M	D	K	L	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S																	T			T	T																	T	T	T	T	T	T														T	T					T	T	S	T	T	G
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	R	V	H	I	T	N	V	L	S	M	L	V	S	K	L	D	M	N	D	T	N	L	T	S	N	L	I	N	G	I	V	S	I	A	A	F	I	P	I	Q	D	L	T	G	E	D	D	Y	I	S	F	E	S	D	T	L	P	L	V	Q	Q	H	F	Y	H	I	K	C	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G												T			S	S																		T	S		B								T	T							T													T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	S	S	K	T	F	R	V	D	D	E	L	L	N	N	A	F	K	A	S	T	T	V	F	Q	S	M	L	K	V	Y	V	E	K	I	F	Q	L	V	D	V	D	L	E	D	S	L	V	T	K	I	N	Q	T	T	M	I	L	Q	E	S	M	D	D	K	I	F	N	Y	F	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	T	T					T	T										T	T	T																T	T	S				T																T	B
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	S	L	L	N	R	N	F	W	S	N	D	S	F	K	E	K	D	P	N	Y	E	L	V	T	I	P	L	A	A	L	V	R	R	N	N	G	L	S	K	E	L	V	R	T	L	L	F	H	I	K	E	Q	I	K	R	G	A	G	S	V	R	S	T	S	E	I	Q	Q	R	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S						S	S	S			T															G	G	G																		T	T	T	T		S			S	S	S			T	T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	V	K	L	V	L	Y	L	T	A	L	N	D	V	L	R	N	C	H	E	S	L	L	E	Y	S	D	E	L	I	T	F	M	K	Y	L	Y	D	N	V	T	N	P	P	L	D	V	I	T	S	I	V	I	H	S	A	L	A	T	L	C	T	T	E	I	T	D	C	R	L	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T	T	G	G	G	G	G	T	T														S											T	T													B						S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	P	E	D	S	K	I	P	E	K	D	R	W	G	G	L	Q	F	D	P	R	R	F	D	K	Q	H	L	S	F	Q	W	H	V	P	S	S	D	E	I	T	L	S	I	S	I	L	E	S	L	S	E	Y	C	I	N	N	V	E	E	L	M	K	A	P	R	H	D	S	E	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S				S		S				S		S	S	S	S	G	G	G	G	S	T	T	T						B																												S		S			S	S		S	T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.
Sequence	G	D	M	I	Q	K	Y	V	L	V	M	T	H	T	L	S	G	S	S	L	L	F	D	P	D	F	N	K	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S	S	G	G	G	G			G	G	G	G	T

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PDB structure

FASTA sequence

Hidden Markov model

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