PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3htkC_

Fold library id	PDB Header	Molecule	Title
c3htkC_	PDB header: recombination/replication/ligase	Chain: C: PDB Molecule: e3 sumo-protein ligase mms21;	PDBTitle: crystal structure of mms21 and smc5 complex

Links to external resources
Added to library: Sun Aug 29 04:11:18 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence D N P I P K S V P L H P K S G K Y F H N L H A R D L S N I Y Q Q C Y K Q I D E T I N Q L V D S T S P S T I G I E E Q V A D I T S T Y K L L S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S
G G G
S S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence T Y E S E S N S F D E H I K D L K K N F K Q S S D A C P Q I D L S T W D K Y R T G E L T A P K L S E L Y L N M P T P E P A T M V N N T D T L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
T T T S S
T
S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence K I L K V L P Y I W N D P T C V I P D L Q N P A D E D D L Q I E G G K I E L T C P I T C K P Y E A P L I S R K C N H V F D R D G I Q N Y L Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T B
S S T T
S S
S S B
S B
T T T S S B
S S S S S
S T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . .

Sequence G Y T T R D C P Q A A C S Q V V S M R D F V R D P I M E L R C K I A K M K E S Q E Q D K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
S G G G
S
G G G

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	N	P	I	P	K	S	V	P	L	H	P	K	S	G	K	Y	F	H	N	L	H	A	R	D	L	S	N	I	Y	Q	Q	C	Y	K	Q	I	D	E	T	I	N	Q	L	V	D	S	T	S	P	S	T	I	G	I	E	E	Q	V	A	D	I	T	S	T	Y	K	L	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S		S						G	G	G																																						S	S		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	Y	E	S	E	S	N	S	F	D	E	H	I	K	D	L	K	K	N	F	K	Q	S	S	D	A	C	P	Q	I	D	L	S	T	W	D	K	Y	R	T	G	E	L	T	A	P	K	L	S	E	L	Y	L	N	M	P	T	P	E	P	A	T	M	V	N	N	T	D	T	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																										T	S					T	T								T	S	S											T					S			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	I	L	K	V	L	P	Y	I	W	N	D	P	T	C	V	I	P	D	L	Q	N	P	A	D	E	D	D	L	Q	I	E	G	G	K	I	E	L	T	C	P	I	T	C	K	P	Y	E	A	P	L	I	S	R	K	C	N	H	V	F	D	R	D	G	I	Q	N	Y	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T	B						S	S	T	T		S	S						S	S	B			S	B		T	T	T	S	S	B		S	S					S	S	S													S	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Sequence	G	Y	T	T	R	D	C	P	Q	A	A	C	S	Q	V	V	S	M	R	D	F	V	R	D	P	I	M	E	L	R	C	K	I	A	K	M	K	E	S	Q	E	Q	D	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T		S					S	G	G	G		S					G	G	G