Email l.a.kelley@imperial.ac.uk Description P33353 Date Thu Jan 5 11:51:54 GMT 2012 Unique Job ID a1ceb9407ef865e4

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1oy5a_ 57.6 33 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:tRNA(m1G37)-methyltransferase TrmD 2 c1oy5B_ 56.7 34 PDB header:transferase Chain: B: PDB Molecule:trna (guanine-n(1)-)-methyltransferase; PDBTitle: crystal structure of trna (m1g37) methyltransferase from aquifex2 aeolicus 3 d2b5id2 35.6 21 Fold:Complement control module/SCR domain Superfamily:Complement control module/SCR domain Family:Complement control module/SCR domain 4 d1s6la2 25.7 14 Fold:NosL/MerB-like Superfamily:NosL/MerB-like Family:MerB-like 5 d1p9pa_ 20.4 22 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:tRNA(m1G37)-methyltransferase TrmD 6 d1nfga1 19.5 10 Fold:Composite domain of metallo-dependent hydrolases Superfamily:Composite domain of metallo-dependent hydrolases Family:Hydantoinase (dihydropyrimidinase) 7 d1uala_ 18.2 22 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:tRNA(m1G37)-methyltransferase TrmD 8 c3quvB_ 17.2 11 PDB header:transferase Chain: B: PDB Molecule:trna (guanine-n(1)-)-methyltransferase; PDBTitle: crystal structure of a trna-guanine-n1-methyltransferase from2 mycobacterium abscessus 9 c3knuD_ 16.7 19 PDB header:transferase Chain: D: PDB Molecule:trna (guanine-n(1)-)-methyltransferase; PDBTitle: crystal structure of trna (guanine-n1)-methyltransferase from2 anaplasma phagocytophilum 10 d1dx5i2 14.0 38 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:EGF/Laminin Family:EGF-type module 11 c2l6nA_ 13.4 15 PDB header:structure genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein yp_001092504.1; PDBTitle: nmr solution structure of the protein yp_001092504.1 12 d1zaka2 13.1 50 Fold:Rubredoxin-like Superfamily:Microbial and mitochondrial ADK, insert "zinc finger" domain Family:Microbial and mitochondrial ADK, insert "zinc finger" domain 13 d2ih2a2 12.9 24 Fold:DNA methylase specificity domain Superfamily:DNA methylase specificity domain Family:TaqI C-terminal domain-like 14 c3ky7A_ 12.5 22 PDB header:transferase Chain: A: PDB Molecule:trna (guanine-n(1)-)-methyltransferase; PDBTitle: 2.35 angstrom resolution crystal structure of a putative trna2 (guanine-7-)-methyltransferase (trmd) from staphylococcus aureus3 subsp. aureus mrsa252 15 c1v85A_ 11.7 33 PDB header:apoptosis Chain: A: PDB Molecule:similar to ring finger protein 36; PDBTitle: sterile alpha motif (sam) domain of mouse bifunctional2 apoptosis regulator 16 d1nh8a2 11.6 14 Fold:Ferredoxin-like Superfamily:GlnB-like Family:ATP phosphoribosyltransferase (ATP-PRTase, HisG), regulatory C-terminal domain 17 d2akja4 11.6 20 Fold:Nitrite and sulphite reductase 4Fe-4S domain-like Superfamily:Nitrite and sulphite reductase 4Fe-4S domain-like Family:Nitrite and sulphite reductase 4Fe-4S domain-like 18 c3pvcA_ 11.3 38 PDB header:oxidoreductase, transferase Chain: A: PDB Molecule:trna 5-methylaminomethyl-2-thiouridine biosynthesis PDBTitle: crystal structure of apo mnmc from yersinia pestis 19 c2e58D_ 10.5 25 PDB header:transferase Chain: D: PDB Molecule:mnmc2; PDBTitle: crystal structure of mnmc2 from aquifex aeolicus 20 d1veha_ 10.4 20 Fold:Alpha-lytic protease prodomain-like Superfamily:Fe-S cluster assembly (FSCA) domain-like Family:NifU C-terminal domain-like 21 c3luuA_ not modelled 10.3 11 PDB header:biosynthetic protein Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of protein with unknown function which belongs to2 pfam duf971 family (afe_2189) from acidithiobacillus ferrooxidans3 atcc 23270 at 1.93 a resolution 22 d2bt6a1 not modelled 10.1 24 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 23 d1zj8a4 not modelled 9.6 10 Fold:Nitrite and sulphite reductase 4Fe-4S domain-like Superfamily:Nitrite and sulphite reductase 4Fe-4S domain-like Family:Nitrite and sulphite reductase 4Fe-4S domain-like 24 c3pghD_ not modelled 9.3 23 PDB header:oxidoreductase Chain: D: PDB Molecule:cyclooxygenase-2; PDBTitle: cyclooxygenase-2 (prostaglandin synthase-2) complexed with a non-2 selective inhibitor, flurbiprofen 25 c2jdjB_ not modelled 9.3 7 PDB header:biosynthetic protein Chain: B: PDB Molecule:redy-like protein; PDBTitle: crystal structure of hapk from hahella chejuensis 26 d1nkia_ not modelled 9.2 30 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Antibiotic resistance proteins 27 c1ddxA_ not modelled 8.5 20 PDB header:oxidoreductase Chain: A: PDB Molecule:protein (prostaglandin h2 synthase-2); PDBTitle: crystal structure of a mixture of arachidonic acid and prostaglandin2 bound to the cyclooxygenase active site of cox-2: prostaglandin3 structure 28 d3cu0a1 not modelled 8.4 25 Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:1,3-glucuronyltransferase 29 d1m7xa1 not modelled 8.3 13 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:E-set domains of sugar-utilizing enzymes 30 d3proc2 not modelled 8.0 14 Fold:Alpha-lytic protease prodomain-like Superfamily:Alpha-lytic protease prodomain Family:Alpha-lytic protease prodomain 31 c1pggB_ not modelled 7.8 38 PDB header:oxidoreductase Chain: B: PDB Molecule:prostaglandin h2 synthase-1; PDBTitle: prostaglandin h2 synthase-1 complexed with 1-(4-iodobenzoyl)-5-2 methoxy-2-methylindole-3-acetic acid (iodoindomethacin), trans model 32 c1ht8B_ not modelled 7.8 38 PDB header:oxidoreductase Chain: B: PDB Molecule:prostaglandin h2 synthase-1; PDBTitle: the 2.7 angstrom resolution model of ovine cox-1 complexed with2 alclofenac 33 c2oyuP_ not modelled 7.7 38 PDB header:oxidoreductase Chain: P: PDB Molecule:prostaglandin g/h synthase 1; PDBTitle: indomethacin-(s)-alpha-ethyl-ethanolamide bound to cyclooxygenase-1 34 d1xr4a2 not modelled 7.5 16 Fold:NagB/RpiA/CoA transferase-like Superfamily:NagB/RpiA/CoA transferase-like Family:CoA transferase alpha subunit-like 35 d2r7da1 not modelled 7.3 28 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 36 c2d0jD_ not modelled 7.2 25 PDB header:transferase Chain: D: PDB Molecule:galactosylgalactosylxylosylprotein 3-beta- PDBTitle: crystal structure of human glcat-s apo form 37 d1v82a_ not modelled 7.1 25 Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:1,3-glucuronyltransferase 38 c2lkjA_ not modelled 7.1 44 PDB header:cell adhesion Chain: A: PDB Molecule:integrin alpha-m; PDBTitle: structures and interaction analyses of the integrin alpha-m beta-22 cytoplasmic tails 39 d1wgya_ not modelled 7.1 20 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ras-binding domain, RBD 40 c2ofqA_ not modelled 7.0 11 PDB header:protein transport/protein transport Chain: A: PDB Molecule:trao; PDBTitle: nmr solution structure of a complex between the virb9/virb72 interaction domains of the pkm101 type iv secretion system 41 c2kakA_ not modelled 6.8 47 PDB header:metal binding protein Chain: A: PDB Molecule:ec protein i/ii; PDBTitle: solution structure of the beta-e-domain of wheat ec-12 metallothionein 42 d1xhja_ not modelled 6.7 17 Fold:Alpha-lytic protease prodomain-like Superfamily:Fe-S cluster assembly (FSCA) domain-like Family:NifU C-terminal domain-like 43 d1bxni_ not modelled 6.7 4 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 44 d1npba_ not modelled 6.7 30 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Antibiotic resistance proteins 45 c2kvhA_ not modelled 6.6 27 PDB header:transcription Chain: A: PDB Molecule:zinc finger and btb domain-containing protein 32; PDBTitle: structure of the three-cys2his2 domain of mouse testis zinc2 finger protein 46 c2k49A_ not modelled 6.4 19 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0339 protein so_3888; PDBTitle: solution nmr structure of upf0339 protein so3888 from shewanella2 oneidensis. northeast structural genomics consortium target sor190 47 c2x8nA_ not modelled 6.4 11 PDB header:structural genomics Chain: A: PDB Molecule:cv0863; PDBTitle: solution nmr structure of uncharacterized protein cv08632 from chromobacterium violaceum. northeast structural3 genomics target (nesg) target cvt3. ocsp4 target cv0863. 48 d1uzhc1 not modelled 6.4 9 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 49 c3iefA_ not modelled 6.4 19 PDB header:transferase, rna binding protein Chain: A: PDB Molecule:trna (guanine-n(1)-)-methyltransferase; PDBTitle: crystal structure of trna guanine-n1-methyltransferase from2 bartonella henselae using mpcs. 50 c3n5nX_ not modelled 6.2 15 PDB header:hydrolase Chain: X: PDB Molecule:a/g-specific adenine dna glycosylase; PDBTitle: crystal structure analysis of the catalytic domain and interdomain2 connector of human muty homologue 51 c2d2aA_ not modelled 6.1 25 PDB header:metal transport Chain: A: PDB Molecule:sufa protein; PDBTitle: crystal structure of escherichia coli sufa involved in2 biosynthesis of iron-sulfur clusters 52 c2k8oA_ not modelled 6.1 78 PDB header:cell adhesion Chain: A: PDB Molecule:integrin alpha-l; PDBTitle: solution structure of integrin alpha l 53 c2k7iB_ not modelled 6.1 25 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:upf0339 protein atu0232; PDBTitle: solution nmr structure of protein atu0232 from agrobacterium2 tumefaciens. northeast structural genomics consortium (nesg) target3 att3. ontario center for structural proteomics target atc0223. 54 d2k7ia1 not modelled 6.1 25 Fold:YegP-like Superfamily:YegP-like Family:YegP-like 55 c1aqsA_ not modelled 6.1 43 PDB header:metallothionein Chain: A: PDB Molecule:cu-metallothionein; PDBTitle: cu-metallothionein from saccharomyces cerevisiae, nmr, 102 structures 56 d3bida1 not modelled 6.0 6 Fold:YegP-like Superfamily:YegP-like Family:YegP-like 57 d2a2pa1 not modelled 5.9 21 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Selenoprotein W-related 58 d1tkea1 not modelled 5.9 19 Fold:beta-Grasp (ubiquitin-like) Superfamily:TGS-like Family:TGS domain 59 c3ps9A_ not modelled 5.9 44 PDB header:transferase Chain: A: PDB Molecule:trna 5-methylaminomethyl-2-thiouridine biosynthesis PDBTitle: crystal structure of mnmc from e. coli 60 c2p58B_ not modelled 5.8 42 PDB header:transport protein/chaperone Chain: B: PDB Molecule:putative type iii secretion protein yscf; PDBTitle: structure of the yersinia pestis type iii secretion system2 needle protein yscf in complex with its chaperones3 ysce/yscg 61 d1rbli_ not modelled 5.7 9 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 62 c2p0tA_ not modelled 5.5 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0307 protein pspto_4464; PDBTitle: structural genomics, the crystal structure of a conserved putative2 protein from pseudomonas syringae pv. tomato str. dc3000 63 d2p0ta1 not modelled 5.5 14 Fold:PSPTO4464-like Superfamily:PSPTO4464-like Family:PSPTO4464-like 64 d1wxma1 not modelled 5.5 14 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ras-binding domain, RBD 65 d1w7ja1 not modelled 5.5 27 Fold:SH3-like barrel Superfamily:Myosin S1 fragment, N-terminal domain Family:Myosin S1 fragment, N-terminal domain 66 c3jqoH_ not modelled 5.4 11 PDB header:transport protein Chain: H: PDB Molecule:trao protein; PDBTitle: crystal structure of the outer membrane complex of a type iv2 secretion system 67 c2k8eA_ not modelled 5.4 16 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0339 protein yegp; PDBTitle: solution nmr structure of protein of unknown function yegp from e.2 coli. ontario center for structural proteomics target ec0640_1_1233 northeast structural genomics consortium target et102. 68 c2apnA_ not modelled 5.3 33 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:protein hi1723; PDBTitle: hi1723 solution structure 69 c2vncB_ not modelled 5.3 20 PDB header:hydrolase Chain: B: PDB Molecule:glycogen operon protein glgx; PDBTitle: crystal structure of glycogen debranching enzyme trex from2 sulfolobus solfataricus 70 d1q4ga2 not modelled 5.3 38 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:EGF/Laminin Family:EGF-type module 71 c3fqmA_ not modelled 5.2 38 PDB header:metal binding protein Chain: A: PDB Molecule:non-structural protein 5a; PDBTitle: crystal structure of a novel dimeric form of hcv ns5a domain i protein 72 d1xrta1 not modelled 5.2 19 Fold:Composite domain of metallo-dependent hydrolases Superfamily:Composite domain of metallo-dependent hydrolases Family:Hydantoinase (dihydropyrimidinase) 73 c1q40C_ not modelled 5.1 19 PDB header:translation Chain: C: PDB Molecule:mrna transport regulator mtr2; PDBTitle: crystal structure of the c. albicans mtr2-mex67 m domain complex 74 d1wjpa2 not modelled 5.1 36 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2