Email l.a.kelley@imperial.ac.uk Description P16688 Date Wed Jan 25 15:20:39 GMT 2012 Unique Job ID 9eaafc199bce6c68

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2fsua1 83.2 18 Fold:PLP-dependent transferase-like Superfamily:PhnH-like Family:PhnH-like 2 c2fsuA_ 83.2 18 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:protein phnh; PDBTitle: crystal structure of the phnh protein from escherichia coli 3 d1jera_ 59.6 23 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 4 c1jerA_ 59.6 23 PDB header:electron transport Chain: A: PDB Molecule:cucumber stellacyanin; PDBTitle: cucumber stellacyanin, cu2+, ph 7.0 5 c2l1uA_ 46.3 21 PDB header:oxidoreductase Chain: A: PDB Molecule:methionine-r-sulfoxide reductase b2, mitochondrial; PDBTitle: structure-functional analysis of mammalian msrb2 protein 6 d1ws8a_ 45.6 25 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 7 c3eg9B_ 44.8 19 PDB header:protein transport Chain: B: PDB Molecule:sec24 related gene family, member d; PDBTitle: crystal structure of the mammalian copii-coat protein2 sec23/24 bound to the transport signal sequence of membrin 8 c1m2vB_ 40.0 23 PDB header:protein transport Chain: B: PDB Molecule:protein transport protein sec24; PDBTitle: crystal structure of the yeast sec23/24 heterodimer 9 c2jr7A_ 36.1 21 PDB header:metal binding protein Chain: A: PDB Molecule:dph3 homolog; PDBTitle: solution structure of human desr1 10 d1ywsa1 34.7 33 Fold:Rubredoxin-like Superfamily:CSL zinc finger Family:CSL zinc finger 11 c1pd0A_ 34.6 21 PDB header:transport protein Chain: A: PDB Molecule:protein transport protein sec24; PDBTitle: crystal structure of the copii coat subunit, sec24,2 complexed with a peptide from the snare protein sed53 (yeast syntaxin-5) 12 d1wgea1 34.3 21 Fold:Rubredoxin-like Superfamily:CSL zinc finger Family:CSL zinc finger 13 c1x9rA_ 34.2 26 PDB header:electron transport Chain: A: PDB Molecule:umecyanin; PDBTitle: umecyanin from horse raddish- crystal structure of the2 oxidised form 14 c2qkwA_ 30.7 20 PDB header:transferase Chain: A: PDB Molecule:avirulence protein; PDBTitle: structural basis for activation of plant immunity by2 bacterial effector protein avrpto 15 d2qkwa1 30.7 20 Fold:immunoglobulin/albumin-binding domain-like Superfamily:Avirulence protein AvrPto Family:Avirulence protein AvrPto 16 c2fqhA_ 28.5 28 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein ta0938; PDBTitle: nmr structure of hypothetical protein ta0938 from2 termoplasma acidophilum 17 c3hm2G_ 26.6 22 PDB header:transferase Chain: G: PDB Molecule:precorrin-6y c5,15-methyltransferase; PDBTitle: crystal structure of putative precorrin-6y c5,15-2 methyltransferase targeted domain from corynebacterium3 diphtheriae 18 d3ehbb1 23.6 29 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Periplasmic domain of cytochrome c oxidase subunit II 19 c2aklA_ 22.4 38 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:phna-like protein pa0128; PDBTitle: solution structure for phn-a like protein pa0128 from2 pseudomonas aeruginosa 20 c3cezA_ 20.4 21 PDB header:oxidoreductase Chain: A: PDB Molecule:methionine-r-sulfoxide reductase; PDBTitle: crystal structure of methionine-r-sulfoxide reductase from2 burkholderia pseudomallei 21 c3mb2J_ not modelled 20.4 33 PDB header:isomerase Chain: J: PDB Molecule:4-oxalocrotonate tautomerase family enzyme - beta subunit; PDBTitle: kinetic and structural characterization of a heterohexamer 4-2 oxalocrotonate tautomerase from chloroflexus aurantiacus j-10-fl:3 implications for functional and structural diversity in the4 tautomerase superfamily 22 d1qypa_ not modelled 20.3 20 Fold:Rubredoxin-like Superfamily:Zinc beta-ribbon Family:Transcriptional factor domain 23 d1l1da_ not modelled 19.7 27 Fold:Mss4-like Superfamily:Mss4-like Family:SelR domain 24 c3hcjB_ not modelled 19.2 19 PDB header:oxidoreductase Chain: B: PDB Molecule:peptide methionine sulfoxide reductase; PDBTitle: structure of msrb from xanthomonas campestris (oxidized2 form) 25 d1f56a_ not modelled 19.1 19 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 26 c4a02A_ not modelled 19.0 17 PDB header:chitin binding protein Chain: A: PDB Molecule:chitin binding protein; PDBTitle: x-ray crystallographic structure of efcbm33a 27 c1ymzA_ not modelled 19.0 71 PDB header:unknown function Chain: A: PDB Molecule:cc45; PDBTitle: cc45, an artificial ww domain designed using statistical2 coupling analysis 28 c3uamD_ not modelled 18.8 21 PDB header:protein binding Chain: D: PDB Molecule:chitin binding domain; PDBTitle: crystal structure of a chitin binding domain from burkholderia2 pseudomallei 29 c3l4hA_ not modelled 18.4 33 PDB header:protein binding Chain: A: PDB Molecule:e3 ubiquitin-protein ligase hecw1; PDBTitle: helical box domain and second ww domain of the human e3 ubiquitin-2 protein ligase hecw1 30 c3h87D_ not modelled 18.4 40 PDB header:toxin/antitoxin Chain: D: PDB Molecule:putative uncharacterized protein; PDBTitle: rv0301 rv0300 toxin antitoxin complex from mycobacterium tuberculosis 31 d2fiya1 not modelled 18.3 33 Fold:FdhE-like Superfamily:FdhE-like Family:FdhE-like 32 c2op8A_ not modelled 18.2 13 PDB header:isomerase Chain: A: PDB Molecule:probable tautomerase ywhb; PDBTitle: crystal structure of ywhb- homologue of 4-oxalocrotonate tautomerase 33 d1ok8a2 not modelled 17.0 44 Fold:Viral glycoprotein, central and dimerisation domains Superfamily:Viral glycoprotein, central and dimerisation domains Family:Viral glycoprotein, central and dimerisation domains 34 d2bema_ not modelled 16.7 21 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:E-set domains of sugar-utilizing enzymes 35 c3l9vE_ not modelled 16.3 32 PDB header:oxidoreductase Chain: E: PDB Molecule:putative thiol-disulfide isomerase or thioredoxin; PDBTitle: crystal structure of salmonella enterica serovar typhimurium srga 36 c3egxB_ not modelled 15.8 21 PDB header:protein transport Chain: B: PDB Molecule:protein transport protein sec24a; PDBTitle: crystal structure of the mammalian copii-coat protein2 sec23a/24a complexed with the snare protein sec22b and3 bound to the transport signal sequence of the snare protein4 bet1 37 d1v54b1 not modelled 15.7 29 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Periplasmic domain of cytochrome c oxidase subunit II 38 c3qwnC_ not modelled 15.7 19 PDB header:antitoxin Chain: C: PDB Molecule:hypothetical nigd-like protein; PDBTitle: crystal structure of a hypothetical nigd-like protein (baccac_03262)2 from bacteroides caccae at 2.42 a resolution 39 c3abfB_ not modelled 15.7 18 PDB header:isomerase Chain: B: PDB Molecule:4-oxalocrotonate tautomerase; PDBTitle: crystal structure of a 4-oxalocrotonate tautomerase homologue2 (tthb242) 40 c3rrrM_ not modelled 15.6 38 PDB header:viral protein Chain: M: PDB Molecule:fusion glycoprotein f0; PDBTitle: structure of the rsv f protein in the post-fusion conformation 41 d1svba2 not modelled 15.6 33 Fold:Viral glycoprotein, central and dimerisation domains Superfamily:Viral glycoprotein, central and dimerisation domains Family:Viral glycoprotein, central and dimerisation domains 42 c2ormA_ not modelled 15.5 13 PDB header:isomerase Chain: A: PDB Molecule:probable tautomerase hp0924; PDBTitle: crystal structure of the 4-oxalocrotonate tautomerase homologue dmpi2 from helicobacter pylori. 43 d1otfa_ not modelled 15.2 26 Fold:Tautomerase/MIF Superfamily:Tautomerase/MIF Family:4-oxalocrotonate tautomerase-like 44 c3c6dB_ not modelled 14.9 44 PDB header:virus Chain: B: PDB Molecule:polyprotein; PDBTitle: the pseudo-atomic structure of dengue immature virus 45 c2bn5A_ not modelled 14.9 14 PDB header:nuclear protein Chain: A: PDB Molecule:psi; PDBTitle: p-element somatic inhibitor protein complex with u1-70k2 proline-rich peptide 46 c3uajA_ not modelled 14.8 44 PDB header:viral protein/immune system Chain: A: PDB Molecule:envelope protein; PDBTitle: crystal structure of the envelope glycoprotein ectodomain from dengue2 virus serotype 4 in complex with the fab fragment of the chimpanzee3 monoclonal antibody 5h2 47 d2cbpa_ not modelled 14.7 19 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 48 d3dtub1 not modelled 14.2 23 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Periplasmic domain of cytochrome c oxidase subunit II 49 d1xm0a1 not modelled 14.0 16 Fold:Mss4-like Superfamily:Mss4-like Family:SelR domain 50 c1urzC_ not modelled 14.0 33 PDB header:virus/viral protein Chain: C: PDB Molecule:envelope protein; PDBTitle: low ph induced, membrane fusion conformation of the2 envelope protein of tick-borne encephalitis virus 51 c2x4iA_ not modelled 13.7 15 PDB header:unknown function Chain: A: PDB Molecule:uncharacterized protein 114; PDBTitle: orf 114a from sulfolobus islandicus rudivirus 1 52 c3e0mB_ not modelled 13.5 13 PDB header:oxidoreductase Chain: B: PDB Molecule:peptide methionine sulfoxide reductase msra/msrb PDBTitle: crystal structure of fusion protein of msra and msrb 53 d1pd0a5 not modelled 13.4 28 Fold:Rubredoxin-like Superfamily:Zn-finger domain of Sec23/24 Family:Zn-finger domain of Sec23/24 54 d1un2a_ not modelled 13.3 23 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:DsbA-like 55 d1rj9b1 not modelled 12.6 50 Fold:Four-helical up-and-down bundle Superfamily:Domain of the SRP/SRP receptor G-proteins Family:Domain of the SRP/SRP receptor G-proteins 56 c3eg9A_ not modelled 12.4 16 PDB header:protein transport Chain: A: PDB Molecule:protein transport protein sec23a; PDBTitle: crystal structure of the mammalian copii-coat protein2 sec23/24 bound to the transport signal sequence of membrin 57 c1uzgA_ not modelled 12.3 67 PDB header:viral protein Chain: A: PDB Molecule:major envelope protein e; PDBTitle: crystal structure of the dengue type 3 virus envelope2 protein 58 d1qnta2 not modelled 12.0 28 Fold:Ribonuclease H-like motif Superfamily:Methylated DNA-protein cysteine methyltransferase domain Family:Methylated DNA-protein cysteine methyltransferase domain 59 d2akla2 not modelled 11.8 33 Fold:Rubredoxin-like Superfamily:Zinc beta-ribbon Family:PhnA zinc-binding domain 60 c2k8dA_ not modelled 11.8 19 PDB header:oxidoreductase Chain: A: PDB Molecule:peptide methionine sulfoxide reductase msrb; PDBTitle: solution structure of a zinc-binding methionine sulfoxide reductase 61 d2vv5a2 not modelled 11.6 11 Fold:Ferredoxin-like Superfamily:Mechanosensitive channel protein MscS (YggB), C-terminal domain Family:Mechanosensitive channel protein MscS (YggB), C-terminal domain 62 c3mv2A_ not modelled 11.4 21 PDB header:protein transport Chain: A: PDB Molecule:coatomer subunit alpha; PDBTitle: crystal structure of a-cop in complex with e-cop 63 c1vj7B_ not modelled 11.2 44 PDB header:hydrolase, transferase Chain: B: PDB Molecule:bifunctional rela/spot; PDBTitle: crystal structure of the bifunctional catalytic fragment of relseq,2 the rela/spot homolog from streptococcus equisimilis. 64 d1fvka_ not modelled 11.1 23 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:DsbA-like 65 c1v55B_ not modelled 10.7 29 PDB header:oxidoreductase Chain: B: PDB Molecule:cytochrome c oxidase polypeptide ii; PDBTitle: bovine heart cytochrome c oxidase at the fully reduced state 66 d1utya_ not modelled 10.6 31 Fold:BTV NS2-like ssRNA-binding domain Superfamily:BTV NS2-like ssRNA-binding domain Family:BTV NS2-like ssRNA-binding domain 67 c1utyA_ not modelled 10.6 31 PDB header:viral protein Chain: A: PDB Molecule:non-structural protein 2; PDBTitle: crystal structure of the rna binding domain of bluetongue2 virus non-structural protein 2(ns2) 68 c1m57H_ not modelled 10.5 22 PDB header:oxidoreductase Chain: H: PDB Molecule:cytochrome c oxidase; PDBTitle: structure of cytochrome c oxidase from rhodobacter2 sphaeroides (eq(i-286) mutant)) 69 c3nrtC_ not modelled 10.5 26 PDB header:structural genomics, unknown function Chain: C: PDB Molecule:putative ryanodine receptor; PDBTitle: the crystal strucutre of putative ryanodine receptor from bacteroides2 thetaiotaomicron vpi-5482 70 c3mb2G_ not modelled 10.5 32 PDB header:isomerase Chain: G: PDB Molecule:4-oxalocrotonate tautomerase family enzyme - alpha subunit; PDBTitle: kinetic and structural characterization of a heterohexamer 4-2 oxalocrotonate tautomerase from chloroflexus aurantiacus j-10-fl:3 implications for functional and structural diversity in the4 tautomerase superfamily 71 c1ar1B_ not modelled 10.4 29 PDB header:complex (oxidoreductase/antibody) Chain: B: PDB Molecule:cytochrome c oxidase; PDBTitle: structure at 2.7 angstrom resolution of the paracoccus2 denitrificans two-subunit cytochrome c oxidase complexed3 with an antibody fv fragment 72 c1qleB_ not modelled 10.4 29 PDB header:oxidoreductase/immune system Chain: B: PDB Molecule:cytochrome c oxidase polypeptide ii; PDBTitle: cryo-structure of the paracoccus denitrificans four-subunit2 cytochrome c oxidase in the completely oxidized state3 complexed with an antibody fv fragment 73 c2of6C_ not modelled 10.1 44 PDB header:virus Chain: C: PDB Molecule:envelope glycoprotein e; PDBTitle: structure of immature west nile virus 74 c1m2oA_ not modelled 9.8 23 PDB header:protein transport/signaling protein Chain: A: PDB Molecule:protein transport protein sec23; PDBTitle: crystal structure of the sec23-sar1 complex 75 d2qtva5 not modelled 9.7 28 Fold:Rubredoxin-like Superfamily:Zn-finger domain of Sec23/24 Family:Zn-finger domain of Sec23/24 76 c2voyC_ not modelled 9.6 35 PDB header:hydrolase Chain: C: PDB Molecule:sarcoplasmic/endoplasmic reticulum calcium PDBTitle: cryoem model of copa, the copper transporting atpase from2 archaeoglobus fulgidus 77 d1l1ta3 not modelled 9.5 29 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:C-terminal, Zn-finger domain of MutM-like DNA repair proteins 78 c3ry0A_ not modelled 9.5 24 PDB header:isomerase Chain: A: PDB Molecule:putative tautomerase; PDBTitle: crystal structure of tomn, a 4-oxalocrotonate tautomerase homologue in2 tomaymycin biosynthetic pathway 79 d1bjpa_ not modelled 9.4 26 Fold:Tautomerase/MIF Superfamily:Tautomerase/MIF Family:4-oxalocrotonate tautomerase-like 80 c3m20A_ not modelled 9.3 13 PDB header:isomerase Chain: A: PDB Molecule:4-oxalocrotonate tautomerase, putative; PDBTitle: crystal structure of dmpi from archaeoglobus fulgidus determined to2 2.37 angstroms resolution 81 c2iwjA_ not modelled 9.2 50 PDB header:transferase Chain: A: PDB Molecule:gag-pol polyprotein; PDBTitle: solution structure of the zn complex of hiv-2 ncp(23-49)2 peptide, encompassing protein cchc-linker, distal cchc zn-3 binding motif and c-terminal tail. 82 c2xwxB_ not modelled 8.8 13 PDB header:chitin-binding protein Chain: B: PDB Molecule:glcnac-binding protein a; PDBTitle: vibrio cholerae colonization factor gbpa crystal structure 83 d1fftb1 not modelled 8.8 23 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Periplasmic domain of cytochrome c oxidase subunit II 84 c2jq4A_ not modelled 8.8 8 PDB header:structural genomics Chain: A: PDB Molecule:hypothetical protein atu2571; PDBTitle: complete resonance assignments and solution structure2 calculation of atc2521 (nesg id: att6) from agrobacterium3 tumefaciens 85 d2jq4a1 not modelled 8.8 8 Fold:Acyl carrier protein-like Superfamily:ACP-like Family:Acyl-carrier protein (ACP) 86 c2kaoA_ not modelled 8.7 25 PDB header:oxidoreductase Chain: A: PDB Molecule:methionine-r-sulfoxide reductase b1; PDBTitle: structure of reduced mouse methionine sulfoxide reductase b12 (sec95cys mutant) 87 c2ysbA_ not modelled 8.5 45 PDB header:protein binding Chain: A: PDB Molecule:salvador homolog 1 protein; PDBTitle: solution structure of the first ww domain from the mouse2 salvador homolog 1 protein (sav1) 88 d1k9ra_ not modelled 8.5 50 Fold:WW domain-like Superfamily:WW domain Family:WW domain 89 c2hw2A_ not modelled 8.3 54 PDB header:transferase Chain: A: PDB Molecule:rifampin adp-ribosyl transferase; PDBTitle: crystal structure of rifampin adp-ribosyl transferase in2 complex with rifampin 90 d1u5tb1 not modelled 8.1 21 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Vacuolar sorting protein domain 91 c2x5cB_ not modelled 8.1 29 PDB header:viral protein Chain: B: PDB Molecule:hypothetical protein orf131; PDBTitle: crystal structure of hypothetical protein orf131 from2 pyrobaculum spherical virus 92 d1tqza1 not modelled 8.0 15 Fold:PH domain-like barrel Superfamily:PH domain-like Family:Necap1 N-terminal domain-like 93 d1nmva1 not modelled 7.7 40 Fold:WW domain-like Superfamily:WW domain Family:WW domain 94 c1k82D_ not modelled 7.7 25 PDB header:hydrolase/dna Chain: D: PDB Molecule:formamidopyrimidine-dna glycosylase; PDBTitle: crystal structure of e.coli formamidopyrimidine-dna2 glycosylase (fpg) covalently trapped with dna 95 d2joza1 not modelled 7.7 31 Fold:Lipocalins Superfamily:Lipocalins Family:Retinol binding protein-like 96 c1p58C_ not modelled 7.3 44 PDB header:virus Chain: C: PDB Molecule:major envelope protein e; PDBTitle: complex organization of dengue virus membrane proteins as revealed by2 9.5 angstrom cryo-em reconstruction 97 d1nuia2 not modelled 7.3 27 Fold:Rubredoxin-like Superfamily:Zinc beta-ribbon Family:DNA primase zinc finger 98 c2wcuB_ not modelled 7.3 17 PDB header:isomerase Chain: B: PDB Molecule:protein fucu homolog; PDBTitle: crystal structure of mammalian fucu 99 c2x4kB_ not modelled 7.1 20 PDB header:isomerase Chain: B: PDB Molecule:4-oxalocrotonate tautomerase; PDBTitle: crystal structure of sar1376, a putative 4-oxalocrotonate2 tautomerase from the methicillin-resistant staphylococcus3 aureus (mrsa)