Email l.a.kelley@imperial.ac.uk Description P26365 Date Thu Jan 5 11:42:53 GMT 2012 Unique Job ID 9c86d3df803e8927

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3ne8A_ 100.0 33 PDB header:hydrolase Chain: A: PDB Molecule:n-acetylmuramoyl-l-alanine amidase; PDBTitle: the crystal structure of a domain from n-acetylmuramoyl-l-alanine2 amidase of bartonella henselae str. houston-1 2 d1jwqa_ 100.0 36 Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:N-acetylmuramoyl-L-alanine amidase-like 3 c1xovA_ 100.0 19 PDB header:hydrolase Chain: A: PDB Molecule:ply protein; PDBTitle: the crystal structure of the listeria monocytogenes bacteriophage psa2 endolysin plypsa 4 c3czxA_ 100.0 20 PDB header:hydrolase Chain: A: PDB Molecule:putative n-acetylmuramoyl-l-alanine amidase; PDBTitle: the crystal structure of the putative n-acetylmuramoyl-l-2 alanine amidase from neisseria meningitidis 5 d1xova2 100.0 20 Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:N-acetylmuramoyl-L-alanine amidase-like 6 c3qayC_ 100.0 22 PDB header:lyase Chain: C: PDB Molecule:endolysin; PDBTitle: catalytic domain of cd27l endolysin targeting clostridia difficile 7 d2gfqa1 89.2 32 Fold:Phosphorylase/hydrolase-like Superfamily:AF0625-like Family:AF0625-like 8 c2gfqC_ 88.5 36 PDB header:structural genomics, unknown function Chain: C: PDB Molecule:upf0204 protein ph0006; PDBTitle: structure of protein of unknown function ph0006 from pyrococcus2 horikoshii 9 d1yqea1 86.4 29 Fold:Phosphorylase/hydrolase-like Superfamily:AF0625-like Family:AF0625-like 10 c2qvpC_ 77.2 19 PDB header:hydrolase Chain: C: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a putative metallopeptidase (sama_0725) from2 shewanella amazonensis sb2b at 2.00 a resolution 11 c1wwpA_ 54.9 31 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein ttha0636; PDBTitle: crystal structure of ttk003001694 from thermus thermophilus2 hb8 12 c3fs2A_ 53.6 36 PDB header:transferase Chain: A: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase; PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate2 aldolase from bruciella melitensis at 1.85a resolution 13 d1fx0b1 49.4 19 Fold:Left-handed superhelix Superfamily:C-terminal domain of alpha and beta subunits of F1 ATP synthase Family:C-terminal domain of alpha and beta subunits of F1 ATP synthase 14 c1c4gB_ 49.1 17 PDB header:transferase Chain: B: PDB Molecule:protein (alpha-d-glucose 1-phosphate PDBTitle: phosphoglucomutase vanadate based transition state analog2 complex 15 c2fuvB_ 44.9 21 PDB header:isomerase Chain: B: PDB Molecule:phosphoglucomutase; PDBTitle: phosphoglucomutase from salmonella typhimurium. 16 d1nyra1 41.3 14 Fold:Anticodon-binding domain-like Superfamily:Class II aaRS ABD-related Family:Anticodon-binding domain of Class II aaRS 17 c3i3wB_ 41.2 19 PDB header:isomerase Chain: B: PDB Molecule:phosphoglucosamine mutase; PDBTitle: structure of a phosphoglucosamine mutase from francisella tularensis 18 c3k2kA_ 40.5 14 PDB header:hydrolase Chain: A: PDB Molecule:putative carboxypeptidase; PDBTitle: crystal structure of putative carboxypeptidase (yp_103406.1) from2 burkholderia mallei atcc 23344 at 2.49 a resolution 19 d1kfia2 38.7 21 Fold:Phosphoglucomutase, first 3 domains Superfamily:Phosphoglucomutase, first 3 domains Family:Phosphoglucomutase, first 3 domains 20 d1txka1 35.4 10 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:E-set domains of sugar-utilizing enzymes 21 d2b3ya2 not modelled 34.3 16 Fold:Aconitase iron-sulfur domain Superfamily:Aconitase iron-sulfur domain Family:Aconitase iron-sulfur domain 22 c3l2nA_ not modelled 32.8 16 PDB header:hydrolase Chain: A: PDB Molecule:peptidase m14, carboxypeptidase a; PDBTitle: crystal structure of putative carboxypeptidase a (yp_562911.1) from2 shewanella denitrificans os-217 at 2.39 a resolution 23 c3t4cD_ not modelled 32.6 39 PDB header:transferase Chain: D: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase 1; PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from2 burkholderia ambifaria 24 c1nj2A_ not modelled 31.5 18 PDB header:ligase Chain: A: PDB Molecule:proline-trna synthetase; PDBTitle: crystal structure of prolyl-trna synthetase from methanothermobacter2 thermautotrophicus 25 c1z65A_ not modelled 29.8 41 PDB header:unknown function Chain: A: PDB Molecule:prion-like protein doppel; PDBTitle: mouse doppel 1-30 peptide 26 d1nj8a1 not modelled 29.6 10 Fold:Anticodon-binding domain-like Superfamily:Class II aaRS ABD-related Family:Anticodon-binding domain of Class II aaRS 27 d1acoa2 not modelled 28.7 22 Fold:Aconitase iron-sulfur domain Superfamily:Aconitase iron-sulfur domain Family:Aconitase iron-sulfur domain 28 d1skye1 not modelled 28.0 13 Fold:Left-handed superhelix Superfamily:C-terminal domain of alpha and beta subunits of F1 ATP synthase Family:C-terminal domain of alpha and beta subunits of F1 ATP synthase 29 d1ad1a_ not modelled 25.8 50 Fold:TIM beta/alpha-barrel Superfamily:Dihydropteroate synthetase-like Family:Dihydropteroate synthetase 30 c2f7lA_ not modelled 25.7 16 PDB header:isomerase Chain: A: PDB Molecule:455aa long hypothetical phospho-sugar mutase; PDBTitle: crystal structure of sulfolobus tokodaii2 phosphomannomutase/phosphoglucomutase 31 c5acnA_ not modelled 25.1 22 PDB header:lyase(carbon-oxygen) Chain: A: PDB Molecule:aconitase; PDBTitle: structure of activated aconitase. formation of the (4fe-4s)2 cluster in the crystal 32 c2ronA_ not modelled 24.6 25 PDB header:hydrolase Chain: A: PDB Molecule:surfactin synthetase thioesterase subunit; PDBTitle: the external thioesterase of the surfactin-synthetase 33 d1nj1a1 not modelled 24.4 19 Fold:Anticodon-binding domain-like Superfamily:Class II aaRS ABD-related Family:Anticodon-binding domain of Class II aaRS 34 d1qm4a1 not modelled 24.1 10 Fold:S-adenosylmethionine synthetase Superfamily:S-adenosylmethionine synthetase Family:S-adenosylmethionine synthetase 35 c2vf7B_ not modelled 23.4 30 PDB header:dna-binding protein Chain: B: PDB Molecule:excinuclease abc, subunit a.; PDBTitle: crystal structure of uvra2 from deinococcus radiodurans 36 c3l80A_ not modelled 22.8 17 PDB header:hydrolase Chain: A: PDB Molecule:putative uncharacterized protein smu.1393c; PDBTitle: crystal structure of smu.1393c from streptococcus mutans ua159 37 c1k8wA_ not modelled 22.8 64 PDB header:lyase/rna Chain: A: PDB Molecule:trna pseudouridine synthase b; PDBTitle: crystal structure of the e. coli pseudouridine synthase2 trub bound to a t stem-loop rna 38 c2ae3A_ not modelled 22.6 18 PDB header:hydrolase Chain: A: PDB Molecule:glutaryl 7-aminocephalosporanic acid acylase; PDBTitle: glutaryl 7-aminocephalosporanic acid acylase: mutational study of2 activation mechanism 39 c3nh8A_ not modelled 22.2 16 PDB header:hydrolase Chain: A: PDB Molecule:aspartoacylase-2; PDBTitle: crystal structure of murine aminoacylase 3 in complex with n-acetyl-s-2 1,2-dichlorovinyl-l-cysteine 40 d1b74a1 not modelled 22.1 27 Fold:ATC-like Superfamily:Aspartate/glutamate racemase Family:Aspartate/glutamate racemase 41 d1yw6a1 not modelled 21.8 14 Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:AstE/AspA-like 42 c3bghB_ not modelled 21.6 16 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative neuraminyllactose-binding hemagglutinin homolog; PDBTitle: crystal structure of putative neuraminyllactose-binding hemagglutinin2 homolog from helicobacter pylori 43 d1mxaa1 not modelled 21.3 13 Fold:S-adenosylmethionine synthetase Superfamily:S-adenosylmethionine synthetase Family:S-adenosylmethionine synthetase 44 c1kfiA_ not modelled 20.9 21 PDB header:isomerase Chain: A: PDB Molecule:phosphoglucomutase 1; PDBTitle: crystal structure of the exocytosis-sensitive2 phosphoprotein, pp63/parafusin (phosphoglucomutase) from3 paramecium 45 c2b3yB_ not modelled 20.8 16 PDB header:lyase Chain: B: PDB Molecule:iron-responsive element binding protein 1; PDBTitle: structure of a monoclinic crystal form of human cytosolic aconitase2 (irp1) 46 c2y5sA_ not modelled 20.6 50 PDB header:transferase Chain: A: PDB Molecule:dihydropteroate synthase; PDBTitle: crystal structure of burkholderia cenocepacia dihydropteroate2 synthase complexed with 7,8-dihydropteroate. 47 c3pdkB_ not modelled 20.3 24 PDB header:isomerase Chain: B: PDB Molecule:phosphoglucosamine mutase; PDBTitle: crystal structure of phosphoglucosamine mutase from b. anthracis 48 d2p02a1 not modelled 19.9 8 Fold:S-adenosylmethionine synthetase Superfamily:S-adenosylmethionine synthetase Family:S-adenosylmethionine synthetase 49 d2ey4a2 not modelled 19.6 67 Fold:Pseudouridine synthase Superfamily:Pseudouridine synthase Family:Pseudouridine synthase II TruB 50 d1p5dx2 not modelled 19.2 17 Fold:Phosphoglucomutase, first 3 domains Superfamily:Phosphoglucomutase, first 3 domains Family:Phosphoglucomutase, first 3 domains 51 c1ze2B_ not modelled 18.6 67 PDB header:lyase/rna Chain: B: PDB Molecule:trna pseudouridine synthase b; PDBTitle: conformational change of pseudouridine 55 synthase upon its2 association with rna substrate 52 c2e85B_ not modelled 18.5 30 PDB header:hydrolase Chain: B: PDB Molecule:hydrogenase 3 maturation protease; PDBTitle: crystal structure of the hydrogenase 3 maturation protease 53 c2dzaA_ not modelled 18.4 38 PDB header:transferase Chain: A: PDB Molecule:dihydropteroate synthase; PDBTitle: crystal structure of dihydropteroate synthase from thermus2 thermophilus hb8 in complex with 4-aminobenzoate 54 d2fsja1 not modelled 18.3 22 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Ta0583-like 55 d2g4ca1 not modelled 18.0 11 Fold:Anticodon-binding domain-like Superfamily:Class II aaRS ABD-related Family:Anticodon-binding domain of Class II aaRS 56 d1joga_ not modelled 17.8 25 Fold:Four-helical up-and-down bundle Superfamily:Nucleotidyltransferase substrate binding subunit/domain Family:Family 1 bi-partite nucleotidyltransferase subunit 57 c2ygrD_ not modelled 17.4 26 PDB header:hydrolase Chain: D: PDB Molecule:uvrabc system protein a; PDBTitle: mycobacterium tuberculosis uvra 58 d1qf6a1 not modelled 17.3 4 Fold:Anticodon-binding domain-like Superfamily:Class II aaRS ABD-related Family:Anticodon-binding domain of Class II aaRS 59 d1g5ha1 not modelled 16.9 11 Fold:Anticodon-binding domain-like Superfamily:Class II aaRS ABD-related Family:Anticodon-binding domain of Class II aaRS 60 c1u83A_ not modelled 16.8 24 PDB header:lyase Chain: A: PDB Molecule:phosphosulfolactate synthase; PDBTitle: psl synthase from bacillus subtilis 61 d1u83a_ not modelled 16.8 24 Fold:TIM beta/alpha-barrel Superfamily:(2r)-phospho-3-sulfolactate synthase ComA Family:(2r)-phospho-3-sulfolactate synthase ComA 62 c3ibtA_ not modelled 16.8 15 PDB header:oxidoreductase Chain: A: PDB Molecule:1h-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; PDBTitle: structure of 1h-3-hydroxy-4-oxoquinoline 2,4-dioxygenase (qdo) 63 d2bodx1 not modelled 16.7 36 Fold:7-stranded beta/alpha barrel Superfamily:Glycosyl hydrolases family 6, cellulases Family:Glycosyl hydrolases family 6, cellulases 64 d1sgva2 not modelled 16.5 58 Fold:Pseudouridine synthase Superfamily:Pseudouridine synthase Family:Pseudouridine synthase II TruB 65 c1b74A_ not modelled 16.4 27 PDB header:isomerase Chain: A: PDB Molecule:glutamate racemase; PDBTitle: glutamate racemase from aquifex pyrophilus 66 c2vefB_ not modelled 16.0 43 PDB header:transferase Chain: B: PDB Molecule:dihydropteroate synthase; PDBTitle: dihydropteroate synthase from streptococcus pneumoniae 67 c2vp8A_ not modelled 15.9 38 PDB header:transferase Chain: A: PDB Molecule:dihydropteroate synthase 2; PDBTitle: structure of mycobacterium tuberculosis rv1207 68 d1cr5a2 not modelled 15.9 20 Fold:Cdc48 domain 2-like Superfamily:Cdc48 domain 2-like Family:Cdc48 domain 2-like 69 d1ccwa_ not modelled 15.8 17 Fold:Flavodoxin-like Superfamily:Cobalamin (vitamin B12)-binding domain Family:Cobalamin (vitamin B12)-binding domain 70 d1r3ea2 not modelled 15.8 67 Fold:Pseudouridine synthase Superfamily:Pseudouridine synthase Family:Pseudouridine synthase II TruB 71 d2apoa2 not modelled 15.6 67 Fold:Pseudouridine synthase Superfamily:Pseudouridine synthase Family:Pseudouridine synthase II TruB 72 c1zcoA_ not modelled 15.4 32 PDB header:lyase Chain: A: PDB Molecule:2-dehydro-3-deoxyphosphoheptonate aldolase; PDBTitle: crystal structure of pyrococcus furiosus 3-deoxy-d-arabino-2 heptulosonate 7-phosphate synthase 73 d1k8wa5 not modelled 15.3 64 Fold:Pseudouridine synthase Superfamily:Pseudouridine synthase Family:Pseudouridine synthase II TruB 74 d1eyea_ not modelled 15.2 38 Fold:TIM beta/alpha-barrel Superfamily:Dihydropteroate synthetase-like Family:Dihydropteroate synthetase 75 d1c4xa_ not modelled 15.2 17 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Carbon-carbon bond hydrolase 76 c2jfoB_ not modelled 14.9 23 PDB header:isomerase Chain: B: PDB Molecule:glutamate racemase; PDBTitle: crystal structure of enterococcus faecalis glutamate2 racemase in complex with d- and l-glutamate 77 c3a64A_ not modelled 14.8 54 PDB header:hydrolase Chain: A: PDB Molecule:cellobiohydrolase; PDBTitle: crystal structure of cccel6c, a glycoside hydrolase family 62 enzyme, from coprinopsis cinerea 78 c1tx2A_ not modelled 14.6 50 PDB header:transferase Chain: A: PDB Molecule:dhps, dihydropteroate synthase; PDBTitle: dihydropteroate synthetase, with bound inhibitor manic, from bacillus2 anthracis 79 d1tx2a_ not modelled 14.6 50 Fold:TIM beta/alpha-barrel Superfamily:Dihydropteroate synthetase-like Family:Dihydropteroate synthetase 80 c1y80A_ not modelled 14.6 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:predicted cobalamin binding protein; PDBTitle: structure of a corrinoid (factor iiim)-binding protein from2 moorella thermoacetica 81 d1wu7a1 not modelled 14.4 13 Fold:Anticodon-binding domain-like Superfamily:Class II aaRS ABD-related Family:Anticodon-binding domain of Class II aaRS 82 c3uaiA_ not modelled 14.4 50 PDB header:isomerase/chaperone Chain: A: PDB Molecule:h/aca ribonucleoprotein complex subunit 4; PDBTitle: structure of the shq1-cbf5-nop10-gar1 complex from saccharomyces2 cerevisiae 83 c2dakA_ not modelled 14.3 17 PDB header:hydrolase Chain: A: PDB Molecule:ubiquitin carboxyl-terminal hydrolase 5; PDBTitle: solution structure of the second uba domain in the human2 ubiquitin specific protease 5 (isopeptidase 5) 84 d1dysa_ not modelled 13.7 31 Fold:7-stranded beta/alpha barrel Superfamily:Glycosyl hydrolases family 6, cellulases Family:Glycosyl hydrolases family 6, cellulases 85 c3na6A_ not modelled 13.7 10 PDB header:hydrolase Chain: A: PDB Molecule:succinylglutamate desuccinylase/aspartoacylase; PDBTitle: crystal structure of a succinylglutamate desuccinylase (tm1040_2694)2 from silicibacter sp. tm1040 at 2.00 a resolution 86 c2gx8B_ not modelled 13.6 19 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:nif3-related protein; PDBTitle: the crystal stucture of bacillus cereus protein related to nif3 87 d3bofa1 not modelled 13.6 18 Fold:TIM beta/alpha-barrel Superfamily:Dihydropteroate synthetase-like Family:Methyltetrahydrofolate-utiluzing methyltransferases 88 c2ey4A_ not modelled 13.6 64 PDB header:isomerase/biosynthetic protein Chain: A: PDB Molecule:probable trna pseudouridine synthase b; PDBTitle: crystal structure of a cbf5-nop10-gar1 complex 89 d1qjwa_ not modelled 13.4 38 Fold:7-stranded beta/alpha barrel Superfamily:Glycosyl hydrolases family 6, cellulases Family:Glycosyl hydrolases family 6, cellulases 90 c2daiA_ not modelled 12.7 26 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ubiquitin associated domain containing 1; PDBTitle: solution structure of the first uba domain in the human2 ubiquitin associated domain containing 1 (ubadc1) 91 c3r1jB_ not modelled 12.5 20 PDB header:oxidoreductase Chain: B: PDB Molecule:alpha-ketoglutarate-dependent taurine dioxygenase; PDBTitle: crystal structure of alpha-ketoglutarate-dependent taurine dioxygenase2 from mycobacterium avium, native form 92 d3pmga2 not modelled 12.5 15 Fold:Phosphoglucomutase, first 3 domains Superfamily:Phosphoglucomutase, first 3 domains Family:Phosphoglucomutase, first 3 domains 93 c2apoA_ not modelled 12.4 67 PDB header:isomerase/rna binding protein Chain: A: PDB Molecule:probable trna pseudouridine synthase b; PDBTitle: crystal structure of the methanococcus jannaschii cbf52 nop10 complex 94 d1uoza_ not modelled 12.4 25 Fold:7-stranded beta/alpha barrel Superfamily:Glycosyl hydrolases family 6, cellulases Family:Glycosyl hydrolases family 6, cellulases 95 d1ifya_ not modelled 12.0 18 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 96 c2jfqA_ not modelled 11.9 29 PDB header:isomerase Chain: A: PDB Molecule:glutamate racemase; PDBTitle: crystal structure of staphylococcus aureus glutamate2 racemase in complex with d-glutamate 97 d1icxa_ not modelled 11.9 30 Fold:TBP-like Superfamily:Bet v1-like Family:Pathogenesis-related protein 10 (PR10)-like 98 d1fmfa_ not modelled 11.8 21 Fold:Flavodoxin-like Superfamily:Cobalamin (vitamin B12)-binding domain Family:Cobalamin (vitamin B12)-binding domain 99 d1oc7a_ not modelled 11.8 36 Fold:7-stranded beta/alpha barrel Superfamily:Glycosyl hydrolases family 6, cellulases Family:Glycosyl hydrolases family 6, cellulases