Fold library entry viewer: c1kfiA_

Added to library: Tue Mar 16 14:21:52 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	V	I	P	A	P	R	V	Q	V	T	Q	P	Y	A	G	Q	K	P	G	T	S	G	L	R	K	K	V	S	E	A	T	Q	P	N	Y	L	E	N	F	V	Q	S	I	F	N	T	L	R	K	D	E	L	K	P	K	N	V	L	F	V	G	G	D	G	R	Y	F	N	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B												T	T				B	T	T	B									T	S	T	T													S		G	G	G	S	S	S	S											T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	A	I	F	S	I	I	R	L	A	Y	A	N	D	I	S	E	V	H	V	G	Q	A	G	L	M	S	T	P	A	S	S	H	Y	I	R	K	V	N	E	E	V	G	N	C	I	G	G	I	I	L	T	A	S	H	N	P	G	G	K	E	H	G	D	F	G	I	K	F	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T		S						G	G	G		B																S												T	T	S			S	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	R	T	G	A	P	A	P	E	D	F	T	D	Q	I	Y	T	H	T	T	K	I	K	E	Y	L	T	V	D	Y	E	F	E	K	H	I	N	L	D	Q	I	G	V	Y	K	F	E	G	T	R	L	E	K	S	H	F	E	V	K	V	V	D	T	V	Q	D	Y	T	Q	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S	S	B														T	T											G	G	G	T			T	T	S								B			T	T											S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	M	Q	K	L	F	D	F	D	L	L	K	G	L	F	S	N	K	D	F	S	F	R	F	D	G	M	H	G	V	A	G	P	Y	A	K	H	I	F	G	T	L	L	G	C	S	K	E	S	L	L	N	C	D	P	S	E	D	F	G	G	G	H	P	D	P	N	L	T	Y	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S										T		T	T								T	T	S	T										T	T	T	T				G	G	G			S		S			T	T	G	G	G	S					S	T	T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	H	D	L	V	E	L	L	D	I	H	K	K	K	D	V	G	T	V	P	Q	F	G	A	A	C	D	G	D	A	D	R	N	M	I	L	G	R	Q	F	F	V	T	P	S	D	S	L	A	V	I	A	A	N	A	N	L	I	F	K	N	G	L	L	G	A	A	R	S	M	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T	T			S		G	G	G	S		S							T	T	S		B						T	T															T					S	T	T									T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	T	S	G	A	L	D	K	V	A	A	K	N	G	I	K	L	F	E	T	P	T	G	W	K	F	F	G	N	L	M	D	A	G	L	I	N	L	C	G	E	E	S	F	G	T	G	S	N	H	I	R	E	K	D	G	I	W	A	V	L	A	W	L	T	I	L	A	H	K	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		T										T								S	S	T									T	T	S		S					T	T	T					T	T	S	S	S																		T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	K	N	T	D	H	F	V	T	V	E	E	I	V	T	Q	Y	W	Q	Q	F	G	R	N	Y	Y	S	R	Y	D	Y	E	Q	V	D	S	A	G	A	N	K	M	M	E	H	L	K	T	K	F	Q	Y	F	E	Q	L	K	Q	G	N	K	A	D	I	Y	D	Y	V	D	P	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S		S	S																																										T	T						T	T	S	T	T											T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	D	Q	S	V	S	K	N	Q	G	V	R	F	V	F	G	D	G	S	R	I	I	F	R	L	S	G	T	G	S	V	G	A	T	I	R	I	Y	F	E	Q	F	E	Q	Q	Q	I	Q	H	E	T	A	T	A	L	A	N	I	I	K	L	G	L	E	I	S	D	I	A	Q	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T														T	T	S									S	S		S	S	S												S	S				S
	.	.	.	.	.	.	.	.	.	570
Sequence	T	G	R	N	E	P	T	V	I	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S		S

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PDB structure

FASTA sequence

Hidden Markov model

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