Fold library entry viewer: c5acnA_

Added to library: Tue Mar 16 13:57:11 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	R	A	K	V	A	M	S	H	F	E	P	H	E	Y	I	R	Y	D	L	L	E	K	N	I	D	I	V	R	K	R	L	N	R	P	L	T	L	S	E	K	I	V	Y	G	H	L	D	D	P	A	N	Q	E	I	E	R	G	K	T	Y	L	R	L	R	P	D	R	V	A	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					B	S		T	T		T	T	S	B																			S											T	T	B	S		T	T	T					T	T	T	S							S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	D	A	T	A	Q	M	A	M	L	Q	F	I	S	S	G	L	P	K	V	A	V	P	S	T	I	H	C	D	H	L	I	E	A	Q	L	G	G	E	K	D	L	R	R	A	K	D	I	N	Q	E	V	Y	N	F	L	A	T	A	G	A	K	Y	G	V	G	F	W	R	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T		S	S		S	S								S	S			B	S	S																												T						T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	S	G	I	I	H	Q	I	I	L	E	N	Y	A	Y	P	G	V	L	L	I	G	T	D	S	H	T	P	N	G	G	G	L	G	G	I	C	I	G	V	G	G	A	D	A	V	D	V	M	A	G	I	P	W	E	L	K	C	P	K	V	I	G	V	K	L	T	G	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S	B										T			T	T						S	S	T	T	G	G	G	G	G	G	G	T																	T																	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	S	G	W	T	S	P	K	D	V	I	L	K	V	A	G	I	L	T	V	K	G	G	T	G	A	I	V	E	Y	H	G	P	G	V	D	S	I	S	C	T	G	M	A	T	I	C	N	M	G	A	E	I	G	A	T	T	S	V	F	P	Y	N	H	R	M	K	K	Y	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T																T	T	T	T	T	T							S	S	G	G	G	G	S												G	G	G	G	T		S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	K	T	G	R	A	D	I	A	N	L	A	D	E	F	K	D	H	L	V	P	D	P	G	C	H	Y	D	Q	V	I	E	I	N	L	S	E	L	K	P	H	I	N	G	P	F	T	P	D	L	A	H	P	V	A	E	V	G	S	V	A	E	K	E	G	W	P	L	D	I	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T											T	G	G	G	S	S			T	T				S							S	T	T								S	S	S	S		S															T				B
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	V	G	L	I	G	S	C	T	N	S	S	Y	E	D	M	G	R	S	A	A	V	A	K	Q	A	L	A	H	G	L	K	C	K	S	Q	F	T	I	T	P	G	S	E	Q	I	R	A	T	I	E	R	D	G	Y	A	Q	V	L	R	D	V	G	G	I	V	L	A	N	A	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T	B		S																T	T	T				S	S							S	B										T	S								T	T						S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	G	P	C	I	G	Q	W	D	R	K	D	I	K	K	G	E	K	N	T	I	V	T	S	Y	N	R	N	F	T	G	R	N	D	A	N	P	E	T	H	A	F	V	T	S	P	E	I	V	T	A	L	A	I	A	G	T	L	K	F	N	P	E	T	D	F	L	T	G	K	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	T	T		B				S	S		T	T								S	S	S				T	T	T	T	T	S		T	T																			B	T	T			T	T	T						T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	G	K	K	F	K	L	E	A	P	D	A	D	E	L	P	R	A	E	F	D	P	G	Q	D	T	Y	Q	H	P	P	K	D	S	S	G	Q	R	V	D	V	S	P	T	S	Q	R	L	Q	L	L	E	P	F	D	K	W	D	G	K	D	L	E	D	L	Q	I	L	I	K	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S												S	S		S	S						S	S							S			T	T							T	T		S	S	B											S	S											B
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	K	G	K	C	T	T	D	H	I	S	A	A	G	P	W	L	K	F	R	G	H	L	D	N	I	S	N	N	L	L	I	G	A	I	N	I	E	N	R	K	A	N	S	V	R	N	A	V	T	Q	E	F	G	P	V	P	D	T	A	R	Y	Y	K	Q	H	G	I	R	W	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S			B					S			G	G	G	G	G	G	T	B						G	G	G	T	T	T	T	S			T	T	T	T			T					T	T	T																T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	V	I	G	D	E	N	Y	G	E	G	S	S	R	E	H	S	A	L	E	P	R	H	L	G	G	R	A	I	I	T	K	S	F	A	R	I	H	E	T	N	L	K	K	Q	G	L	L	P	L	T	F	A	D	P	A	D	Y	N	K	I	H	P	V	D	K	L	T	I	Q	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	B	T	B	S				T									T	T							S		B											T	T							S	S	G	G	G	G	G	G			T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.
Sequence	L	K	D	F	A	P	G	K	P	L	K	C	I	I	K	H	P	N	G	T	Q	E	T	I	L	L	N	H	T	F	N	E	T	Q	I	E	W	F	R	A	G	S	A	L	N	R	M	K	E	L	Q	Q	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T			T	T										T	T	S																						T	S								T	T	T

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PDB structure

FASTA sequence

Hidden Markov model

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