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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1k8wA_

Fold library idPDB HeaderMoleculeTitle
c1k8wA_PDB header: lyase/rnaChain: A: PDB Molecule: trna pseudouridine synthase b;PDBTitle: crystal structure of the e. coli pseudouridine synthase2 trub bound to a t stem-loop rna


Added to library: Tue Mar 16 12:53:35 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MDINGVLLLDKPQGMSSNDALQKVKRIYNANRAGHTGALDPLATGMLPICLGEATKFSQYLLDSDKRYRV
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Known secondary structure (DSSP)




TT

TT
S
SS


TT
GGGGGGTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence IARLGQRTDTSDADGQIVEERPVTFSAEQLAAALDTFRGDIEQIPSMYSALKYQGKKLYEYARQGIEVPR
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Known secondary structure (DSSP) TSSSBTTS






TTS


SSS

TTTT




 .........150.........160.........170.........180.........190.........200.........210
Sequence EARPITVYELLFIRHEGNELELEIHCSKGTYIRTIIDDLGEKLGCGAHVIYLRRLAVSKYPVERMVTLEH
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Known secondary structure (DSSP)

TT
TT

TS
TT

GGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence LRELVEQAEQQDIPAAELLDPLLMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTSGAPLEGLVRVTEGEN
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Known secondary structure (DSSP) TTS
TGGG
B
TTGGGTTS

TTT

B

SS

SSSTTT
 .........290.........300....
Sequence GKFIGMGEIDDEGRVAPRRLVVEY
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Known secondary structure (DSSP) T
TTS



-


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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