Email l.a.kelley@imperial.ac.uk Description P36881 Date Thu Jan 5 11:53:56 GMT 2012 Unique Job ID 97d66a7173dae6b9

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1pdoa_ 100.0 27 Fold:PTS system fructose IIA component-like Superfamily:PTS system fructose IIA component-like Family:EIIA-man component-like 2 c3iprC_ 100.0 26 PDB header:transferase Chain: C: PDB Molecule:pts system, iia component; PDBTitle: crystal structure of the enterococcus faecalis gluconate2 specific eiia phosphotransferase system component 3 c3lfhF_ 100.0 17 PDB header:transferase Chain: F: PDB Molecule:phosphotransferase system, mannose/fructose-specific PDBTitle: crystal structure of manxa from thermoanaerobacter tengcongensis 4 c3mtqA_ 100.0 12 PDB header:transferase Chain: A: PDB Molecule:putative phosphoenolpyruvate-dependent sugar PDBTitle: crystal structure of a putative phosphoenolpyruvate-dependent sugar2 phosphotransferase system (pts) permease (kpn_04802) from klebsiella3 pneumoniae subsp. pneumoniae mgh 78578 at 1.70 a resolution 5 d3beda1 100.0 18 Fold:PTS system fructose IIA component-like Superfamily:PTS system fructose IIA component-like Family:EIIA-man component-like 6 c3gx1A_ 99.9 9 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:lin1832 protein; PDBTitle: crystal structure of a domain of lin1832 from listeria innocua 7 d3b48a1 99.8 12 Fold:PTS system fructose IIA component-like Superfamily:PTS system fructose IIA component-like Family:DhaM-like 8 c3gdwA_ 99.5 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:sigma-54 interaction domain protein; PDBTitle: crystal structure of sigma-54 interaction domain protein from2 enterococcus faecalis 9 d3ct6a1 99.1 11 Fold:PTS system fructose IIA component-like Superfamily:PTS system fructose IIA component-like Family:DhaM-like 10 c2btqB_ 90.9 15 PDB header:structural protein Chain: B: PDB Molecule:tubulin btubb; PDBTitle: structure of btubab heterodimer from prosthecobacter2 dejongeii 11 c3edlA_ 88.7 13 PDB header:structural protein Chain: A: PDB Molecule:alpha-tubulin; PDBTitle: kinesin13-microtubule ring complex 12 c2p4nB_ 87.8 12 PDB header:transport protein Chain: B: PDB Molecule:tubulin beta chain; PDBTitle: human monomeric kinesin (1bg2) and bovine tubulin (1jff)2 docked into the 9-angstrom cryo-em map of nucleotide-free3 kinesin complexed to the microtubule 13 c2btoA_ 87.0 24 PDB header:cytoskeletal protein Chain: A: PDB Molecule:tubulin btuba; PDBTitle: structure of btuba from prosthecobacter dejongeii 14 d2btoa1 85.2 24 Fold:Tubulin nucleotide-binding domain-like Superfamily:Tubulin nucleotide-binding domain-like Family:Tubulin, GTPase domain 15 c1z5wA_ 84.5 20 PDB header:structural protein Chain: A: PDB Molecule:tubulin gamma-1 chain; PDBTitle: crystal structure of gamma-tubulin bound to gtp 16 d1tuba1 83.3 11 Fold:Tubulin nucleotide-binding domain-like Superfamily:Tubulin nucleotide-binding domain-like Family:Tubulin, GTPase domain 17 d1tubb1 72.4 13 Fold:Tubulin nucleotide-binding domain-like Superfamily:Tubulin nucleotide-binding domain-like Family:Tubulin, GTPase domain 18 c3lcmB_ 68.9 14 PDB header:oxidoreductase Chain: B: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of smu.1420 from streptococcus mutans ua159 19 c3lupA_ 66.5 15 PDB header:structure genomics, unknown function Chain: A: PDB Molecule:degv family protein; PDBTitle: crystal structure of fatty acid binding degv family protein sag13422 from streptococcus agalactiae 20 c2vxyA_ 59.2 12 PDB header:cell cycle Chain: A: PDB Molecule:cell division protein ftsz; PDBTitle: the structure of ftsz from bacillus subtilis at 1.7a2 resolution 21 d1xm7a_ not modelled 51.9 9 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:Hypothetical protein aq 1666 22 c3rpeA_ not modelled 45.8 11 PDB header:oxidoreductase Chain: A: PDB Molecule:modulator of drug activity b; PDBTitle: 1.1 angstrom crystal structure of putative modulator of drug activity2 (mdab) from yersinia pestis co92. 23 d1mgpa_ not modelled 41.5 17 Fold:DAK1/DegV-like Superfamily:DAK1/DegV-like Family:DegV-like 24 c1mgpA_ not modelled 41.5 17 PDB header:lipid binding protein Chain: A: PDB Molecule:hypothetical protein tm841; PDBTitle: hypothetical protein tm841 from thermotoga maritima reveals2 fatty acid binding function 25 c2g7zB_ not modelled 39.9 5 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:conserved hypothetical protein spy1493; PDBTitle: conserved degv-like protein of unknown function from streptococcus2 pyogenes m1 gas binds long-chain fatty acids 26 d1q0qa2 not modelled 37.0 17 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 27 d1t5ba_ not modelled 36.8 10 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Quinone reductase 28 d2qwxa1 not modelled 35.0 10 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Quinone reductase 29 c3ho6B_ not modelled 33.0 17 PDB header:toxin Chain: B: PDB Molecule:toxin a; PDBTitle: structure-function analysis of inositol hexakisphosphate-2 induced autoprocessing in clostridium difficile toxin a 30 d1a2za_ not modelled 32.8 12 Fold:Phosphorylase/hydrolase-like Superfamily:Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) Family:Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) 31 c4a5oB_ not modelled 28.8 9 PDB header:oxidoreductase Chain: B: PDB Molecule:bifunctional protein fold; PDBTitle: crystal structure of pseudomonas aeruginosa n5, n10-2 methylenetetrahydrofolate dehydrogenase-cyclohydrolase (fold) 32 c3p2oA_ not modelled 27.8 9 PDB header:oxidoreductase, hydrolase Chain: A: PDB Molecule:bifunctional protein fold; PDBTitle: crystal structure of fold bifunctional protein from campylobacter2 jejuni 33 d2amha1 not modelled 27.5 14 Fold:Anticodon-binding domain-like Superfamily:ITPase-like Family:Maf-like 34 c3l07B_ not modelled 27.2 6 PDB header:oxidoreductase,hydrolase Chain: B: PDB Molecule:bifunctional protein fold; PDBTitle: methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate2 cyclohydrolase, putative bifunctional protein fold from francisella3 tularensis. 35 d1k6ma2 not modelled 27.2 19 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain 36 c4a26B_ not modelled 27.2 14 PDB header:oxidoreductase Chain: B: PDB Molecule:putative c-1-tetrahydrofolate synthase, cytoplasmic; PDBTitle: the crystal structure of leishmania major n5,n10-2 methylenetetrahydrofolate dehydrogenase/cyclohydrolase 37 c3p2oB_ not modelled 26.6 9 PDB header:oxidoreductase, hydrolase Chain: B: PDB Molecule:bifunctional protein fold; PDBTitle: crystal structure of fold bifunctional protein from campylobacter2 jejuni 38 d1bifa2 not modelled 23.9 19 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain 39 c1mgtA_ not modelled 22.9 11 PDB header:transferase Chain: A: PDB Molecule:protein (o6-methylguanine-dna methyltransferase); PDBTitle: crystal structure of o6-methylguanine-dna methyltransferase from2 hyperthermophilic archaeon pyrococcus kodakaraensis strain kod1 40 c3dnfB_ not modelled 22.8 17 PDB header:oxidoreductase Chain: B: PDB Molecule:4-hydroxy-3-methylbut-2-enyl diphosphate reductase; PDBTitle: structure of (e)-4-hydroxy-3-methyl-but-2-enyl diphosphate reductase,2 the terminal enzyme of the non-mevalonate pathway 41 c3ha2B_ not modelled 22.4 8 PDB header:oxidoreductase Chain: B: PDB Molecule:nadph-quinone reductase; PDBTitle: crystal structure of protein (nadph-quinone reductase) from2 p.pentosaceus, northeast structural genomics consortium target ptr24a 42 c3lyhB_ not modelled 22.0 12 PDB header:lyase Chain: B: PDB Molecule:cobalamin (vitamin b12) biosynthesis cbix protein; PDBTitle: crystal structure of putative cobalamin (vitamin b12) biosynthesis2 cbix protein (yp_958415.1) from marinobacter aquaeolei vt8 at 1.60 a3 resolution 43 c2dt8A_ not modelled 21.7 19 PDB header:lipid binding protein Chain: A: PDB Molecule:degv family protein; PDBTitle: fatty acid binding of a degv family protein from thermus thermophilus 44 c2hqbA_ not modelled 20.6 12 PDB header:transcription Chain: A: PDB Molecule:transcriptional activator of comk gene; PDBTitle: crystal structure of a transcriptional activator of comk2 gene from bacillus halodurans 45 d1rtta_ not modelled 19.1 7 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:NADPH-dependent FMN reductase 46 c2qniA_ not modelled 18.9 11 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein atu0299; PDBTitle: crystal structure of uncharacterized protein atu0299 47 c3eglC_ not modelled 17.5 13 PDB header:structural genomics, unknown function Chain: C: PDB Molecule:degv family protein; PDBTitle: crystal structure of degv family protein cg2579 from corynebacterium2 glutamicum 48 d1ul3a_ not modelled 16.5 16 Fold:Ferredoxin-like Superfamily:GlnB-like Family:Prokaryotic signal transducing protein 49 c2jh3C_ not modelled 16.2 18 PDB header:ribosomal protein Chain: C: PDB Molecule:ribosomal protein s2-related protein; PDBTitle: the crystal structure of dr2241 from deinococcus2 radiodurans at 1.9 a resolution reveals a multi-domain3 protein with structural similarity to chelatases but also4 with two additional novel domains 50 c1b0aA_ not modelled 15.8 9 PDB header:oxidoreductase,hydrolase Chain: A: PDB Molecule:protein (fold bifunctional protein); PDBTitle: 5,10, methylene-tetrahydropholate2 dehydrogenase/cyclohydrolase from e coli. 51 c1pd7B_ not modelled 15.5 0 PDB header:transcription Chain: B: PDB Molecule:mad1; PDBTitle: extended sid of mad1 bound to the pah2 domain of msin3b 52 c3r7aA_ not modelled 14.8 11 PDB header:transferase Chain: A: PDB Molecule:phosphoglycerate mutase, putative; PDBTitle: crystal structure of phosphoglycerate mutase from bacillus anthracis2 str. sterne 53 c3f2vA_ not modelled 14.7 8 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:general stress protein 14; PDBTitle: crystal structure of the general stress protein 142 (tde0354) in complex with fmn from treponema denticola,3 northeast structural genomics consortium target tdr58. 54 c3dcyA_ not modelled 14.4 11 PDB header:apoptosis regulator Chain: A: PDB Molecule:regulator protein; PDBTitle: crystal structure a tp53-induced glycolysis and apoptosis2 regulator protein from homo sapiens. 55 c3eznB_ not modelled 14.4 18 PDB header:isomerase Chain: B: PDB Molecule:2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; PDBTitle: crystal structure of phosphoglyceromutase from burkholderia2 pseudomallei 1710b 56 c2gi4A_ not modelled 13.2 16 PDB header:hydrolase Chain: A: PDB Molecule:possible phosphotyrosine protein phosphatase; PDBTitle: solution structure of the low molecular weight protein2 tyrosine phosphatase from campylobacter jejuni. 57 d1jsca3 not modelled 13.2 14 Fold:Thiamin diphosphate-binding fold (THDP-binding) Superfamily:Thiamin diphosphate-binding fold (THDP-binding) Family:Pyruvate oxidase and decarboxylase PP module 58 c1bifA_ not modelled 13.2 19 PDB header:bifunctional enzyme Chain: A: PDB Molecule:6-phosphofructo-2-kinase/ fructose-2,6-bisphosphatase; PDBTitle: 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase bifunctional2 enzyme complexed with atp-g-s and phosphate 59 d3pgma_ not modelled 12.9 18 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:Cofactor-dependent phosphoglycerate mutase 60 c2e0kA_ not modelled 12.9 14 PDB header:transferase Chain: A: PDB Molecule:precorrin-2 c20-methyltransferase; PDBTitle: crystal structure of cbil, a methyltransferase involved in anaerobic2 vitamin b12 biosynthesis 61 c3d8hB_ not modelled 12.8 18 PDB header:isomerase Chain: B: PDB Molecule:glycolytic phosphoglycerate mutase; PDBTitle: crystal structure of phosphoglycerate mutase from cryptosporidium2 parvum, cgd7_4270 62 d1qrda_ not modelled 12.6 15 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Quinone reductase 63 c3k35D_ not modelled 12.5 17 PDB header:hydrolase Chain: D: PDB Molecule:nad-dependent deacetylase sirtuin-6; PDBTitle: crystal structure of human sirt6 64 c3lftA_ not modelled 12.5 14 PDB header:structure genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: the crystal structure of the abc domain in complex with l-trp from2 streptococcus pneumonia to 1.35a 65 d1lssa_ not modelled 12.4 11 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Potassium channel NAD-binding domain 66 c1k6mA_ not modelled 11.9 19 PDB header:transferase, hydrolase Chain: A: PDB Molecule:6-phosphofructo-2-kinase/fructose-2,6- PDBTitle: crystal structure of human liver 6-phosphofructo-2-2 kinase/fructose-2,6-bisphosphatase 67 d2bo3a1 not modelled 11.5 29 Fold:HP0242-like Superfamily:HP0242-like Family:HP0242-like 68 c2i1vB_ not modelled 11.4 19 PDB header:transferase, hydrolase Chain: B: PDB Molecule:6-phosphofructo-2-kinase/fructose-2,6- PDBTitle: crystal structure of pfkfb3 in complex with adp and2 fructose-2,6-bisphosphate 69 c3pkiF_ not modelled 11.2 19 PDB header:hydrolase Chain: F: PDB Molecule:nad-dependent deacetylase sirtuin-6; PDBTitle: human sirt6 crystal structure in complex with adp ribose 70 d1tipa_ not modelled 11.2 19 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain 71 c2c2xB_ not modelled 11.1 10 PDB header:oxidoreductase Chain: B: PDB Molecule:methylenetetrahydrofolate dehydrogenase- PDBTitle: three dimensional structure of bifunctional2 methylenetetrahydrofolate dehydrogenase-cyclohydrolase3 from mycobacterium tuberculosis 72 c3gpiA_ not modelled 10.9 20 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:nad-dependent epimerase/dehydratase; PDBTitle: structure of putative nad-dependent epimerase/dehydratase2 from methylobacillus flagellatus 73 c3etjB_ not modelled 10.8 13 PDB header:lyase Chain: B: PDB Molecule:phosphoribosylaminoimidazole carboxylase atpase PDBTitle: crystal structure e. coli purk in complex with mg, adp, and2 pi 74 d2nu7b1 not modelled 10.7 11 Fold:Flavodoxin-like Superfamily:Succinyl-CoA synthetase domains Family:Succinyl-CoA synthetase domains 75 c3czcA_ not modelled 10.6 9 PDB header:transferase Chain: A: PDB Molecule:rmpb; PDBTitle: the crystal structure of a putative pts iib(ptxb) from2 streptococcus mutans 76 d1vk4a_ not modelled 10.5 22 Fold:Ribokinase-like Superfamily:Ribokinase-like Family:Ribokinase-like 77 c3m9yB_ not modelled 10.3 11 PDB header:isomerase Chain: B: PDB Molecule:triosephosphate isomerase; PDBTitle: crystal structure of triosephosphate isomerase from methicillin2 resistant staphylococcus aureus at 1.9 angstrom resolution 78 c3icrA_ not modelled 10.1 20 PDB header:oxidoreductase Chain: A: PDB Molecule:coenzyme a-disulfide reductase; PDBTitle: crystal structure of oxidized bacillus anthracis coadr-rhd 79 d2hmva1 not modelled 9.9 10 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Potassium channel NAD-binding domain 80 d1h2ea_ not modelled 9.8 17 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:Cofactor-dependent phosphoglycerate mutase 81 d2b8na1 not modelled 9.5 17 Fold:GckA/TtuD-like Superfamily:GckA/TtuD-like Family:GckA/TtuD-like 82 c1a4iB_ not modelled 9.3 5 PDB header:oxidoreductase Chain: B: PDB Molecule:methylenetetrahydrofolate dehydrogenase / PDBTitle: human tetrahydrofolate dehydrogenase / cyclohydrolase 83 d1nnsa_ not modelled 9.2 16 Fold:Glutaminase/Asparaginase Superfamily:Glutaminase/Asparaginase Family:Glutaminase/Asparaginase 84 d1fzta_ not modelled 9.1 18 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:Cofactor-dependent phosphoglycerate mutase 85 c3rqzC_ not modelled 9.0 22 PDB header:hydrolase Chain: C: PDB Molecule:metallophosphoesterase; PDBTitle: crystal structure of metallophosphoesterase from sphaerobacter2 thermophilus 86 c3eozB_ not modelled 9.0 17 PDB header:isomerase Chain: B: PDB Molecule:putative phosphoglycerate mutase; PDBTitle: crystal structure of phosphoglycerate mutase from plasmodium2 falciparum, pfd0660w 87 c2gamA_ not modelled 8.9 11 PDB header:transferase Chain: A: PDB Molecule:beta-1,6-n-acetylglucosaminyltransferase; PDBTitle: x-ray crystal structure of murine leukocyte-type core 2 b1,2 6-n-acetylglucosaminyltransferase (c2gnt-l) in complex3 with galb1,3galnac 88 c2ps3A_ not modelled 8.7 9 PDB header:metal transport Chain: A: PDB Molecule:high-affinity zinc uptake system protein znua; PDBTitle: structure and metal binding properties of znua, a2 periplasmic zinc transporter from escherichia coli 89 c2q1yB_ not modelled 8.6 9 PDB header:cell cycle, signaling protein Chain: B: PDB Molecule:cell division protein ftsz; PDBTitle: crystal structure of cell division protein ftsz from mycobacterium2 tuberculosis in complex with gtp-gamma-s 90 c3e0zB_ not modelled 8.3 6 PDB header:unknown function Chain: B: PDB Molecule:protein of unknown function; PDBTitle: crystal structure of a putative imidazole glycerol phosphate synthase2 homolog (eubrec_1070) from eubacterium rectale at 1.75 a resolution 91 d1t0ia_ not modelled 8.2 11 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:NADPH-dependent FMN reductase 92 c2qaiA_ not modelled 8.2 15 PDB header:hydrolase Chain: A: PDB Molecule:v-type atp synthase subunit f; PDBTitle: crystal structure of the v-type atp synthase subunit f from2 pyrococcus furiosus. nesg target pfr7. 93 d1vjta1 not modelled 8.2 8 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:LDH N-terminal domain-like 94 c1nw6A_ not modelled 8.2 12 PDB header:transferase Chain: A: PDB Molecule:modification methylase rsri; PDBTitle: structure of the beta class n6-adenine dna methyltransferase rsri2 bound to sinefungin 95 d2jfga2 not modelled 8.1 9 Fold:MurD-like peptide ligases, peptide-binding domain Superfamily:MurD-like peptide ligases, peptide-binding domain Family:MurCDEF C-terminal domain 96 c3crqA_ not modelled 8.1 12 PDB header:transferase Chain: A: PDB Molecule:trna delta(2)-isopentenylpyrophosphate PDBTitle: structure of trna dimethylallyltransferase: rna2 modification through a channel 97 c3hzuA_ not modelled 8.1 6 PDB header:transferase Chain: A: PDB Molecule:thiosulfate sulfurtransferase ssea; PDBTitle: crystal structure of probable thiosulfate sulfurtransferase ssea2 (rhodanese) from mycobacterium tuberculosis 98 d1j3kc_ not modelled 8.0 24 Fold:Thymidylate synthase/dCMP hydroxymethylase Superfamily:Thymidylate synthase/dCMP hydroxymethylase Family:Thymidylate synthase/dCMP hydroxymethylase 99 c2qhpA_ not modelled 7.9 30 PDB header:transferase Chain: A: PDB Molecule:fructokinase; PDBTitle: crystal structure of fructokinase (np_810670.1) from bacteroides2 thetaiotaomicron vpi-5482 at 1.80 a resolution