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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3lupA_

Fold library idPDB HeaderMoleculeTitle
c3lupA_PDB header: structure genomics, unknown functionChain: A: PDB Molecule: degv family protein;PDBTitle: crystal structure of fatty acid binding degv family protein2 sag1342 from streptococcus agalactiae


Added to library: Sun Aug 29 01:27:06 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AXKLALITDTSAYLPEAIENHEDVYVLDIPIIIDGKTYIEGQNLTLDQYYDKLAASKELPKTSQPSLAEL
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Known secondary structure (DSSP)


TTB


TTTTT
TT


SSSS


BTTTB

SS





 .........80.........90.........100.........110.........120.........130.........140
Sequence DDLLCQLEKEGYTHVLGLFIAAGISGFWQNIQFLIEEHPNLTIAFPDTKITSAPQGNLVRNALXCSREGX
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Known secondary structure (DSSP) TT



S
GGG
TTT
TTS






TTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence DFDVIVNKIQSQIEKIEGFIVVNDLNHLVKGGRLSNGSAIIGNLLSIKPVLHFNEEGKIVVYEKVRTEKK
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Known secondary structure (DSSP)
TT

S
TT
BTTTTS


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SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence ALKRLAEIVKEXTADGEYDIAIIHSRAQDKAEQLYNLLAKAGLKDDLEIVSFGGVIATHLGEGAVAFGIT
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Known secondary structure (DSSP) GGGS
SS
TT
GGG


TT
 ...
Sequence PKN
Predicted secondary structure

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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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