PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3gpiA_

Fold library id	PDB Header	Molecule	Title
c3gpiA_	PDB header: structural genomics, unknown function	Chain: A: PDB Molecule: nad-dependent epimerase/dehydratase;	PDBTitle: structure of putative nad-dependent epimerase/dehydratase2 from methylobacillus flagellatus

Links to external resources
Added to library: Sat Aug 28 19:58:33 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S L S K I L I A G C G D L G L E L A R R L T A Q G H E V T G L R R S A Q P M P A G V Q T L I A D V T R P D T L A S I V H L R P E I L V Y C V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T
T T S
T T
T T
G G G
T T G G G G
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A A S E Y S L S Y V E G L R N T L S A L E G A P L Q H V F F V S S T G V Y G Q E V E E W L D E D T P P I A K D F S G K R M L E A E A L L A A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T T S
G G G
S S
T T S
S G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Y S S T I L R F S G I Y G P G R L R M I R Q A Q T P E Q W P A R N A W T N R I H R D D G A A F I A Y L I Q Q R S H A V P E R L Y I V T D N Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
B T T B
T T
G G G S
S S B
T T S
S
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . .

Sequence P L P V H D L L R W L A D R Q G I A Y P A G A T P P V Q G N K K L S N A R L L A S G Y Q L I Y P D Y V S G Y G A L L A A M R E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S
B
S S
T T
S S
S T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	L	S	K	I	L	I	A	G	C	G	D	L	G	L	E	L	A	R	R	L	T	A	Q	G	H	E	V	T	G	L	R	R	S	A	Q	P	M	P	A	G	V	Q	T	L	I	A	D	V	T	R	P	D	T	L	A	S	I	V	H	L	R	P	E	I	L	V	Y	C	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S													T	T									T	T	S				T	T								T	T		G	G	G		T	T	G	G	G	G			S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	A	S	E	Y	S	L	S	Y	V	E	G	L	R	N	T	L	S	A	L	E	G	A	P	L	Q	H	V	F	F	V	S	S	T	G	V	Y	G	Q	E	V	E	E	W	L	D	E	D	T	P	P	I	A	K	D	F	S	G	K	R	M	L	E	A	E	A	L	L	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S											T	T	T	S											G	G	G						S	S				T	T	S						S													G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	S	S	T	I	L	R	F	S	G	I	Y	G	P	G	R	L	R	M	I	R	Q	A	Q	T	P	E	Q	W	P	A	R	N	A	W	T	N	R	I	H	R	D	D	G	A	A	F	I	A	Y	L	I	Q	Q	R	S	H	A	V	P	E	R	L	Y	I	V	T	D	N	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S											B	T	T	B							T	T		G	G	G	S		S	S	B																							T	T	S				S							S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Sequence	P	L	P	V	H	D	L	L	R	W	L	A	D	R	Q	G	I	A	Y	P	A	G	A	T	P	P	V	Q	G	N	K	K	L	S	N	A	R	L	L	A	S	G	Y	Q	L	I	Y	P	D	Y	V	S	G	Y	G	A	L	L	A	A	M	R	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T						S					B		S	S											T	T				S	S		S													T