PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1mgpA_

Fold library id	PDB Header	Molecule	Title
c1mgpA_	PDB header: lipid binding protein	Chain: A: PDB Molecule: hypothetical protein tm841;	PDBTitle: hypothetical protein tm841 from thermotoga maritima reveals2 fatty acid binding function

Links to external resources
Added to library: Tue Mar 16 13:08:55 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence H X K V K I L V D S T A D V P F S W X E K Y D I D S I P L Y V V W E D G R S E P D E R E P E E I X N F Y K R I R E A G S V P K T S Q P S V E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
T T T T
T T S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D F K K R Y L K Y K E E D Y D V V L V L T L S S K L S G T Y N S A V L A S K E V D I P V Y V V D T L L A S G A I P L P A R V A R E X L E N G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S
T T T
S S S S
S
G G G T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A T I E E V L K K L D E R X K N K D F K A I F Y V S N F D Y L V K G G R V L L K I R V C L H I E N G E L I P Y R K V R G D K K A I E A L I E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S
T T
T T T T S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . .

Sequence K L R E D T P E G S K L R V I G V H A D N E A G V V E L L N T L R K S Y E V V D E I I S P X G K V I T T H V G P G T V G F G I E V L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T T
S S
T T T S
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	H	X	K	V	K	I	L	V	D	S	T	A	D	V	P	F	S	W	X	E	K	Y	D	I	D	S	I	P	L	Y	V	V	W	E	D	G	R	S	E	P	D	E	R	E	P	E	E	I	X	N	F	Y	K	R	I	R	E	A	G	S	V	P	K	T	S	Q	P	S	V	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										G	G	G				T	T					T	T											T	T	S																							S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	F	K	K	R	Y	L	K	Y	K	E	E	D	Y	D	V	V	L	V	L	T	L	S	S	K	L	S	G	T	Y	N	S	A	V	L	A	S	K	E	V	D	I	P	V	Y	V	V	D	T	L	L	A	S	G	A	I	P	L	P	A	R	V	A	R	E	X	L	E	N	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T		S							S		T	T	T		S												S	S	S								S			G	G	G	T													T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	T	I	E	E	V	L	K	K	L	D	E	R	X	K	N	K	D	F	K	A	I	F	Y	V	S	N	F	D	Y	L	V	K	G	G	R	V	L	L	K	I	R	V	C	L	H	I	E	N	G	E	L	I	P	Y	R	K	V	R	G	D	K	K	A	I	E	A	L	I	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T									S		T							T				T	T									T	T										S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Sequence	K	L	R	E	D	T	P	E	G	S	K	L	R	V	I	G	V	H	A	D	N	E	A	G	V	V	E	L	L	N	T	L	R	K	S	Y	E	V	V	D	E	I	I	S	P	X	G	K	V	I	T	T	H	V	G	P	G	T	V	G	F	G	I	E	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S		T	T										S	S													T	T	T	S																				T	T