Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	H	S	L	Q	R	K	V	L	R	T	I	C	P	D	Q	K	G	L	I	A	R	I	T	N	I	C	Y	K	H	E	L	N	I	V	Q	N	N	E	F	V	D	H	R	T	G	R	F	F	M	R	T	E	L	E	G	I	F	N	D
Secondary structure
SS confidence
Disorder		?	?	?	?	?																																																		?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		S	T	L	L	A	D	L	D	S	A	L	P	E	G	S	V	R	E	L	N	P	A	G	R	R	R	I	V	I	L	V	T	K	E	A	H	C	L	G	D	L	L	M	K	A	N	Y	G	G	L	D	V	E	I	A	A	V	I	G	N
Secondary structure
SS confidence
Disorder		?	?	?							?	?		?	?	?	?		?	?	?	?	?																									?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		H	D	T	L	R	S	L	V	E	R	F	D	I	P	F	E	L	V	S	H	E	G	L	T	R	N	E	H	D	Q	K	M	A	D	A	I	D	A	Y	Q	P	D	Y	V	V	L	A	K	Y	M	R	V	L	T	P	E	F	V	A	R
Secondary structure
SS confidence
Disorder								?															?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence		F	P	N	K	I	I	N	I	H	H	S	F	L	P	A	F	I	G	A	R	P	Y	H	Q	A	Y	E	R	G	V	K	I	I	G	A	T	A	H	Y	V	N	D	N	L	D	E	G	P	I	I	M	Q	D	V	I	H	V	D	H	T
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence		Y	T	A	E	D	M	M	R	A	G	R	D	V	E	K	N	V	L	S	R	A	L	Y	K	V	L	A	Q	R	V	F	V	Y	G	N	R	T	I	I	L
Secondary structure
SS confidence
Disorder																																									?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 3lou chain B Region: 5 - 280 Aligned: 276 Modelled: 275 Confidence: 100.0% Identity: 37% PDB header:hydrolase Chain: B: PDB Molecule:formyltetrahydrofolate deformylase; PDBTitle: crystal structure of formyltetrahydrofolate deformylase (yp_105254.1)2 from burkholderia mallei atcc 23344 at 1.90 a resolution Phyre2 PDB 3o1l chain B Region: 3 - 280 Aligned: 278 Modelled: 276 Confidence: 100.0% Identity: 40% PDB header:hydrolase Chain: B: PDB Molecule:formyltetrahydrofolate deformylase; PDBTitle: crystal structure of a formyltetrahydrofolate deformylase (pspto_4314)2 from pseudomonas syringae pv. tomato str. dc3000 at 2.20 a resolution Phyre2 PDB 3obi chain C Region: 5 - 280 Aligned: 276 Modelled: 276 Confidence: 100.0% Identity: 37% PDB header:hydrolase Chain: C: PDB Molecule:formyltetrahydrofolate deformylase; PDBTitle: crystal structure of a formyltetrahydrofolate deformylase (np_949368)2 from rhodopseudomonas palustris cga009 at 1.95 a resolution Phyre2 PDB 3n0v chain D Region: 5 - 280 Aligned: 276 Modelled: 273 Confidence: 100.0% Identity: 38% PDB header:hydrolase Chain: D: PDB Molecule:formyltetrahydrofolate deformylase; PDBTitle: crystal structure of a formyltetrahydrofolate deformylase (pp_0327)2 from pseudomonas putida kt2440 at 2.25 a resolution Phyre2 PDB 3nrb chain D Region: 4 - 280 Aligned: 277 Modelled: 277 Confidence: 100.0% Identity: 39% PDB header:hydrolase Chain: D: PDB Molecule:formyltetrahydrofolate deformylase; PDBTitle: crystal structure of a formyltetrahydrofolate deformylase (puru,2 pp_1943) from pseudomonas putida kt2440 at 2.05 a resolution Phyre2 PDB 2ywr chain A Region: 86 - 279 Aligned: 194 Modelled: 194 Confidence: 100.0% Identity: 27% PDB header:transferase Chain: A: PDB Molecule:phosphoribosylglycinamide formyltransferase; PDBTitle: crystal structure of gar transformylase from aquifex2 aeolicus Phyre2 PDB 1jkx chain A Region: 86 - 279 Aligned: 194 Modelled: 194 Confidence: 100.0% Identity: 26% Fold: Formyltransferase Superfamily: Formyltransferase Family: Formyltransferase Phyre2 PDB 3p9x chain B Region: 85 - 273 Aligned: 189 Modelled: 189 Confidence: 100.0% Identity: 28% PDB header:transferase Chain: B: PDB Molecule:phosphoribosylglycinamide formyltransferase; PDBTitle: crystal structure of phosphoribosylglycinamide formyltransferase from2 bacillus halodurans Phyre2 PDB 3tqr chain A Region: 83 - 279 Aligned: 195 Modelled: 197 Confidence: 100.0% Identity: 29% PDB header:transferase Chain: A: PDB Molecule:phosphoribosylglycinamide formyltransferase; PDBTitle: structure of the phosphoribosylglycinamide formyltransferase (purn) in2 complex with ches from coxiella burnetii Phyre2 PDB 3dcj chain A Region: 81 - 277 Aligned: 196 Modelled: 196 Confidence: 100.0% Identity: 30% PDB header:transferase Chain: A: PDB Molecule:probable 5'-phosphoribosylglycinamide PDBTitle: crystal structure of glycinamide formyltransferase (purn)2 from mycobacterium tuberculosis in complex with 5-methyl-5,3 6,7,8-tetrahydrofolic acid derivative Phyre2 PDB 1meo chain A Region: 85 - 279 Aligned: 192 Modelled: 195 Confidence: 100.0% Identity: 29% Fold: Formyltransferase Superfamily: Formyltransferase Family: Formyltransferase Phyre2 PDB 3kcq chain A Region: 83 - 280 Aligned: 193 Modelled: 198 Confidence: 100.0% Identity: 31% PDB header:transferase Chain: A: PDB Molecule:phosphoribosylglycinamide formyltransferase; PDBTitle: crystal structure of phosphoribosylglycinamide formyltransferase from2 anaplasma phagocytophilum Phyre2 PDB 1fmt chain A domain 2 Region: 82 - 270 Aligned: 177 Modelled: 189 Confidence: 100.0% Identity: 21% Fold: Formyltransferase Superfamily: Formyltransferase Family: Formyltransferase Phyre2 PDB 2bln chain A domain 2 Region: 86 - 270 Aligned: 173 Modelled: 185 Confidence: 100.0% Identity: 21% Fold: Formyltransferase Superfamily: Formyltransferase Family: Formyltransferase Phyre2 PDB 1z7e chain C Region: 86 - 270 Aligned: 173 Modelled: 185 Confidence: 100.0% Identity: 21% PDB header:hydrolase Chain: C: PDB Molecule:protein arna; PDBTitle: crystal structure of full length arna Phyre2 PDB 1fmt chain A Region: 82 - 270 Aligned: 177 Modelled: 189 Confidence: 100.0% Identity: 19% PDB header:formyltransferase Chain: A: PDB Molecule:methionyl-trna fmet formyltransferase; PDBTitle: methionyl-trnafmet formyltransferase from escherichia coli Phyre2 PDB 1s3i chain A domain 2 Region: 86 - 270 Aligned: 178 Modelled: 185 Confidence: 100.0% Identity: 18% Fold: Formyltransferase Superfamily: Formyltransferase Family: Formyltransferase Phyre2 PDB 3tqq chain A Region: 86 - 270 Aligned: 173 Modelled: 185 Confidence: 100.0% Identity: 21% PDB header:transferase Chain: A: PDB Molecule:methionyl-trna formyltransferase; PDBTitle: structure of the methionyl-trna formyltransferase (fmt) from coxiella2 burnetii Phyre2 PDB 1yrw chain A Region: 86 - 270 Aligned: 173 Modelled: 185 Confidence: 100.0% Identity: 21% PDB header:transferase Chain: A: PDB Molecule:protein arna; PDBTitle: crystal structure of e.coli arna transformylase domain Phyre2 PDB 2bw0 chain A domain 2 Region: 86 - 270 Aligned: 178 Modelled: 185 Confidence: 100.0% Identity: 17% Fold: Formyltransferase Superfamily: Formyltransferase Family: Formyltransferase Phyre2 1 c3louB_ 2 c3o1lB_ 3 c3obiC_ 4 c3n0vD_ 5 c3nrbD_ 6 c2ywrA_ 7 d1jkxa_ 8 c3p9xB_ 9 c3tqrA_ 10 c3dcjA_ 11 d1meoa_ 12 c3kcqA_ 13 d1fmta2 14 d2blna2 15 c1z7eC_ 16 c1fmtA_ 17 d1s3ia2 18 c3tqqA_ 19 c1yrwA_ 20 d2bw0a2 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3louB_ 100.0 37 PDB header:hydrolase Chain: B: PDB Molecule:formyltetrahydrofolate deformylase; PDBTitle: crystal structure of formyltetrahydrofolate deformylase (yp_105254.1)2 from burkholderia mallei atcc 23344 at 1.90 a resolution 2 c3o1lB_ 100.0 40 PDB header:hydrolase Chain: B: PDB Molecule:formyltetrahydrofolate deformylase; PDBTitle: crystal structure of a formyltetrahydrofolate deformylase (pspto_4314)2 from pseudomonas syringae pv. tomato str. dc3000 at 2.20 a resolution 3 c3obiC_ 100.0 37 PDB header:hydrolase Chain: C: PDB Molecule:formyltetrahydrofolate deformylase; PDBTitle: crystal structure of a formyltetrahydrofolate deformylase (np_949368)2 from rhodopseudomonas palustris cga009 at 1.95 a resolution 4 c3n0vD_ 100.0 38 PDB header:hydrolase Chain: D: PDB Molecule:formyltetrahydrofolate deformylase; PDBTitle: crystal structure of a formyltetrahydrofolate deformylase (pp_0327)2 from pseudomonas putida kt2440 at 2.25 a resolution 5 c3nrbD_ 100.0 39 PDB header:hydrolase Chain: D: PDB Molecule:formyltetrahydrofolate deformylase; PDBTitle: crystal structure of a formyltetrahydrofolate deformylase (puru,2 pp_1943) from pseudomonas putida kt2440 at 2.05 a resolution 6 c2ywrA_ 100.0 27 PDB header:transferase Chain: A: PDB Molecule:phosphoribosylglycinamide formyltransferase; PDBTitle: crystal structure of gar transformylase from aquifex2 aeolicus 7 d1jkxa_ 100.0 26 Fold:Formyltransferase Superfamily:Formyltransferase Family:Formyltransferase 8 c3p9xB_ 100.0 28 PDB header:transferase Chain: B: PDB Molecule:phosphoribosylglycinamide formyltransferase; PDBTitle: crystal structure of phosphoribosylglycinamide formyltransferase from2 bacillus halodurans 9 c3tqrA_ 100.0 29 PDB header:transferase Chain: A: PDB Molecule:phosphoribosylglycinamide formyltransferase; PDBTitle: structure of the phosphoribosylglycinamide formyltransferase (purn) in2 complex with ches from coxiella burnetii 10 c3dcjA_ 100.0 30 PDB header:transferase Chain: A: PDB Molecule:probable 5'-phosphoribosylglycinamide PDBTitle: crystal structure of glycinamide formyltransferase (purn)2 from mycobacterium tuberculosis in complex with 5-methyl-5,3 6,7,8-tetrahydrofolic acid derivative 11 d1meoa_ 100.0 29 Fold:Formyltransferase Superfamily:Formyltransferase Family:Formyltransferase 12 c3kcqA_ 100.0 31 PDB header:transferase Chain: A: PDB Molecule:phosphoribosylglycinamide formyltransferase; PDBTitle: crystal structure of phosphoribosylglycinamide formyltransferase from2 anaplasma phagocytophilum 13 d1fmta2 100.0 21 Fold:Formyltransferase Superfamily:Formyltransferase Family:Formyltransferase 14 d2blna2 100.0 21 Fold:Formyltransferase Superfamily:Formyltransferase Family:Formyltransferase 15 c1z7eC_ 100.0 21 PDB header:hydrolase Chain: C: PDB Molecule:protein arna; PDBTitle: crystal structure of full length arna 16 c1fmtA_ 100.0 19 PDB header:formyltransferase Chain: A: PDB Molecule:methionyl-trna fmet formyltransferase; PDBTitle: methionyl-trnafmet formyltransferase from escherichia coli 17 d1s3ia2 100.0 18 Fold:Formyltransferase Superfamily:Formyltransferase Family:Formyltransferase 18 c3tqqA_ 100.0 21 PDB header:transferase Chain: A: PDB Molecule:methionyl-trna formyltransferase; PDBTitle: structure of the methionyl-trna formyltransferase (fmt) from coxiella2 burnetii 19 c1yrwA_ 100.0 21 PDB header:transferase Chain: A: PDB Molecule:protein arna; PDBTitle: crystal structure of e.coli arna transformylase domain 20 d2bw0a2 100.0 17 Fold:Formyltransferase Superfamily:Formyltransferase Family:Formyltransferase 21 c3q0iA_ not modelled 100.0 23 PDB header:transferase Chain: A: PDB Molecule:methionyl-trna formyltransferase; PDBTitle: methionyl-trna formyltransferase from vibrio cholerae 22 c3rfoA_ not modelled 100.0 21 PDB header:transferase Chain: A: PDB Molecule:methionyl-trna formyltransferase; PDBTitle: crystal structure of methyionyl-trna formyltransferase from bacillus2 anthracis 23 c1s3iA_ not modelled 100.0 18 PDB header:hydrolase, oxidoreductase Chain: A: PDB Molecule:10-formyltetrahydrofolate dehydrogenase; PDBTitle: crystal structure of the n terminal hydrolase domain of 10-2 formyltetrahydrofolate dehydrogenase 24 d1zgha2 not modelled 100.0 17 Fold:Formyltransferase Superfamily:Formyltransferase Family:Formyltransferase 25 c1zghA_ not modelled 99.9 18 PDB header:transferase Chain: A: PDB Molecule:methionyl-trna formyltransferase; PDBTitle: methionyl-trna formyltransferase from clostridium thermocellum 26 d1zpva1 not modelled 99.4 12 Fold:Ferredoxin-like Superfamily:ACT-like Family:SP0238-like 27 c1u8sB_ not modelled 99.3 10 PDB header:transcription Chain: B: PDB Molecule:glycine cleavage system transcriptional PDBTitle: crystal structure of putative glycine cleavage system2 transcriptional repressor 28 d1u8sa1 not modelled 99.0 12 Fold:Ferredoxin-like Superfamily:ACT-like Family:Glycine cleavage system transcriptional repressor 29 c2nyiB_ not modelled 99.0 11 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:unknown protein; PDBTitle: crystal structure of an unknown protein from galdieria2 sulphuraria 30 d1u8sa2 not modelled 98.8 9 Fold:Ferredoxin-like Superfamily:ACT-like Family:Glycine cleavage system transcriptional repressor 31 c3p96A_ not modelled 97.6 13 PDB header:hydrolase Chain: A: PDB Molecule:phosphoserine phosphatase serb; PDBTitle: crystal structure of phosphoserine phosphatase serb from mycobacterium2 avium, native form 32 c1y7pB_ not modelled 97.4 23 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein af1403; PDBTitle: 1.9 a crystal structure of a protein of unknown function2 af1403 from archaeoglobus fulgidus, probable metabolic3 regulator 33 c3ibwA_ not modelled 97.3 17 PDB header:transferase Chain: A: PDB Molecule:gtp pyrophosphokinase; PDBTitle: crystal structure of the act domain from gtp2 pyrophosphokinase of chlorobium tepidum. northeast3 structural genomics consortium target ctr148a 34 d1ygya3 not modelled 97.1 17 Fold:Ferredoxin-like Superfamily:ACT-like Family:Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain 35 d1sc6a3 not modelled 96.9 13 Fold:Ferredoxin-like Superfamily:ACT-like Family:Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain 36 c1ygyA_ not modelled 96.7 17 PDB header:oxidoreductase Chain: A: PDB Molecule:d-3-phosphoglycerate dehydrogenase; PDBTitle: crystal structure of d-3-phosphoglycerate dehydrogenase from2 mycobacterium tuberculosis 37 d2fgca2 not modelled 96.2 10 Fold:Ferredoxin-like Superfamily:ACT-like Family:IlvH-like 38 c2fgcA_ not modelled 95.7 12 PDB header:transferase Chain: A: PDB Molecule:acetolactate synthase, small subunit; PDBTitle: crystal structure of acetolactate synthase- small subunit from2 thermotoga maritima 39 c3a14B_ not modelled 94.7 21 PDB header:oxidoreductase Chain: B: PDB Molecule:1-deoxy-d-xylulose 5-phosphate reductoisomerase; PDBTitle: crystal structure of dxr from thermotoga maritima, in complex with2 nadph 40 d1ru8a_ not modelled 94.7 10 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Adenine nucleotide alpha hydrolases-like Family:N-type ATP pyrophosphatases 41 c2f1fA_ not modelled 94.0 14 PDB header:transferase Chain: A: PDB Molecule:acetolactate synthase isozyme iii small subunit; PDBTitle: crystal structure of the regulatory subunit of2 acetohydroxyacid synthase isozyme iii from e. coli 42 d2pc6a2 not modelled 93.9 10 Fold:Ferredoxin-like Superfamily:ACT-like Family:IlvH-like 43 d2d13a1 not modelled 93.8 17 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Adenine nucleotide alpha hydrolases-like Family:N-type ATP pyrophosphatases 44 d1f0ka_ not modelled 93.7 15 Fold:UDP-Glycosyltransferase/glycogen phosphorylase Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:Peptidoglycan biosynthesis glycosyltransferase MurG 45 c2pc6C_ not modelled 93.2 12 PDB header:lyase Chain: C: PDB Molecule:probable acetolactate synthase isozyme iii (small subunit); PDBTitle: crystal structure of putative acetolactate synthase- small subunit2 from nitrosomonas europaea 46 d1xi8a3 not modelled 92.9 23 Fold:Molybdenum cofactor biosynthesis proteins Superfamily:Molybdenum cofactor biosynthesis proteins Family:MoeA central domain-like 47 c2e21A_ not modelled 92.6 17 PDB header:ligase Chain: A: PDB Molecule:trna(ile)-lysidine synthase; PDBTitle: crystal structure of tils in a complex with amppnp from aquifex2 aeolicus. 48 c2hmaA_ not modelled 92.6 14 PDB header:transferase Chain: A: PDB Molecule:probable trna (5-methylaminomethyl-2-thiouridylate)- PDBTitle: the crystal structure of trna (5-methylaminomethyl-2-thiouridylate)-2 methyltransferase trmu from streptococcus pneumoniae 49 d2f06a1 not modelled 92.5 17 Fold:Ferredoxin-like Superfamily:ACT-like Family:BT0572-like 50 d2f1fa1 not modelled 92.5 15 Fold:Ferredoxin-like Superfamily:ACT-like Family:IlvH-like 51 c2derA_ not modelled 91.0 12 PDB header:transferase/rna Chain: A: PDB Molecule:trna-specific 2-thiouridylase mnma; PDBTitle: cocrystal structure of an rna sulfuration enzyme mnma and2 trna-glu in the initial trna binding state 52 d1wy5a1 not modelled 90.5 9 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Adenine nucleotide alpha hydrolases-like Family:PP-loop ATPase 53 d1r0ka2 not modelled 90.5 17 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 54 c1ni5A_ not modelled 90.5 15 PDB header:cell cycle Chain: A: PDB Molecule:putative cell cycle protein mesj; PDBTitle: structure of the mesj pp-atpase from escherichia coli 55 c2jcyA_ not modelled 90.3 19 PDB header:oxidoreductase Chain: A: PDB Molecule:1-deoxy-d-xylulose 5-phosphate reductoisomerase; PDBTitle: x-ray structure of mutant 1-deoxy-d-xylulose 5-phosphate2 reductoisomerase, dxr, rv2870c, from mycobacterium3 tuberculosis 56 c3bl5E_ not modelled 90.0 9 PDB header:hydrolase Chain: E: PDB Molecule:queuosine biosynthesis protein quec; PDBTitle: crystal structure of quec from bacillus subtilis: an enzyme2 involved in preq1 biosynthesis 57 d1ni5a1 not modelled 89.9 15 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Adenine nucleotide alpha hydrolases-like Family:PP-loop ATPase 58 c2fu3A_ not modelled 89.6 15 PDB header:biosynthetic protein/structural protein Chain: A: PDB Molecule:gephyrin; PDBTitle: crystal structure of gephyrin e-domain 59 d2ftsa3 not modelled 89.5 17 Fold:Molybdenum cofactor biosynthesis proteins Superfamily:Molybdenum cofactor biosynthesis proteins Family:MoeA central domain-like 60 c3l76B_ not modelled 88.5 8 PDB header:transferase Chain: B: PDB Molecule:aspartokinase; PDBTitle: crystal structure of aspartate kinase from synechocystis 61 d1wu2a3 not modelled 88.3 19 Fold:Molybdenum cofactor biosynthesis proteins Superfamily:Molybdenum cofactor biosynthesis proteins Family:MoeA central domain-like 62 d2f06a2 not modelled 87.4 14 Fold:Ferredoxin-like Superfamily:ACT-like Family:BT0572-like 63 c3a2kB_ not modelled 86.8 13 PDB header:ligase/rna Chain: B: PDB Molecule:trna(ile)-lysidine synthase; PDBTitle: crystal structure of tils complexed with trna 64 c1ofgF_ not modelled 86.7 10 PDB header:oxidoreductase Chain: F: PDB Molecule:glucose-fructose oxidoreductase; PDBTitle: glucose-fructose oxidoreductase 65 d1q0qa2 not modelled 86.6 13 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 66 c1h6dL_ not modelled 86.5 10 PDB header:protein translocation Chain: L: PDB Molecule:precursor form of glucose-fructose PDBTitle: oxidized precursor form of glucose-fructose oxidoreductase2 from zymomonas mobilis complexed with glycerol 67 c2nvwB_ not modelled 86.5 10 PDB header:transcription Chain: B: PDB Molecule:galactose/lactose metabolism regulatory protein PDBTitle: crystal sctucture of transcriptional regulator gal80p from2 kluyveromymes lactis 68 c2nqqA_ not modelled 86.2 16 PDB header:biosynthetic protein Chain: A: PDB Molecule:molybdopterin biosynthesis protein moea; PDBTitle: moea r137q 69 d1phza1 not modelled 86.0 12 Fold:Ferredoxin-like Superfamily:ACT-like Family:Phenylalanine metabolism regulatory domain 70 c2q8nB_ not modelled 85.8 16 PDB header:isomerase Chain: B: PDB Molecule:glucose-6-phosphate isomerase; PDBTitle: crystal structure of glucose-6-phosphate isomerase (ec2 5.3.1.9) (tm1385) from thermotoga maritima at 1.82 a3 resolution 71 c2qmxB_ not modelled 85.6 10 PDB header:ligase Chain: B: PDB Molecule:prephenate dehydratase; PDBTitle: the crystal structure of l-phe inhibited prephenate dehydratase from2 chlorobium tepidum tls 72 c3mwbA_ not modelled 85.3 16 PDB header:lyase Chain: A: PDB Molecule:prephenate dehydratase; PDBTitle: the crystal structure of prephenate dehydratase in complex with l-phe2 from arthrobacter aurescens to 2.0a 73 c3luyA_ not modelled 84.7 14 PDB header:isomerase Chain: A: PDB Molecule:probable chorismate mutase; PDBTitle: putative chorismate mutase from bifidobacterium adolescentis 74 d1jsca3 not modelled 83.9 19 Fold:Thiamin diphosphate-binding fold (THDP-binding) Superfamily:Thiamin diphosphate-binding fold (THDP-binding) Family:Pyruvate oxidase and decarboxylase PP module 75 d1uz5a3 not modelled 83.5 19 Fold:Molybdenum cofactor biosynthesis proteins Superfamily:Molybdenum cofactor biosynthesis proteins Family:MoeA central domain-like 76 c3e18A_ not modelled 83.3 10 PDB header:oxidoreductase Chain: A: PDB Molecule:oxidoreductase; PDBTitle: crystal structure of nad-binding protein from listeria innocua 77 c3q2kB_ not modelled 82.8 13 PDB header:oxidoreductase Chain: B: PDB Molecule:oxidoreductase; PDBTitle: crystal structure of the wlba dehydrogenase from bordetella pertussis2 in complex with nadh and udp-glcnaca 78 c1uz5A_ not modelled 82.4 11 PDB header:molybdopterin biosynthesis Chain: A: PDB Molecule:402aa long hypothetical molybdopterin PDBTitle: the crystal structure of molybdopterin biosynthesis moea2 protein from pyrococcus horikosii 79 c3mtjA_ not modelled 81.7 18 PDB header:oxidoreductase Chain: A: PDB Molecule:homoserine dehydrogenase; PDBTitle: the crystal structure of a homoserine dehydrogenase from thiobacillus2 denitrificans to 2.15a 80 c2f06B_ not modelled 80.0 13 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:conserved hypothetical protein; PDBTitle: crystal structure of protein bt0572 from bacteroides thetaiotaomicron 81 c3lq1A_ not modelled 80.0 23 PDB header:transferase Chain: A: PDB Molecule:2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- PDBTitle: crystal structure of 2-succinyl-6-hydroxy-2,4-cyclohexadiene2 1-carboxylic acid synthase/2-oxoglutarate decarboxylase3 from listeria monocytogenes str. 4b f2365 82 c2o48X_ not modelled 79.4 13 PDB header:oxidoreductase Chain: X: PDB Molecule:dimeric dihydrodiol dehydrogenase; PDBTitle: crystal structure of mammalian dimeric dihydrodiol dehydrogenase 83 c3ceaA_ not modelled 78.6 11 PDB header:oxidoreductase Chain: A: PDB Molecule:myo-inositol 2-dehydrogenase; PDBTitle: crystal structure of myo-inositol 2-dehydrogenase (np_786804.1) from2 lactobacillus plantarum at 2.40 a resolution 84 c2pjkA_ not modelled 77.0 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:178aa long hypothetical molybdenum cofactor PDBTitle: structure of hypothetical molybdenum cofactor biosynthesis2 protein b from sulfolobus tokodaii 85 d2hmfa3 not modelled 77.0 13 Fold:Ferredoxin-like Superfamily:ACT-like Family:Aspartokinase allosteric domain-like 86 d1ozha3 not modelled 76.9 17 Fold:Thiamin diphosphate-binding fold (THDP-binding) Superfamily:Thiamin diphosphate-binding fold (THDP-binding) Family:Pyruvate oxidase and decarboxylase PP module 87 c3e9mC_ not modelled 75.8 10 PDB header:oxidoreductase Chain: C: PDB Molecule:oxidoreductase, gfo/idh/moca family; PDBTitle: crystal structure of an oxidoreductase from enterococcus2 faecalis 88 c2is8A_ not modelled 75.5 8 PDB header:structural protein Chain: A: PDB Molecule:molybdopterin biosynthesis enzyme, moab; PDBTitle: crystal structure of the molybdopterin biosynthesis enzyme moab2 (ttha0341) from thermus theromophilus hb8 89 d1y5ea1 not modelled 74.9 12 Fold:Molybdenum cofactor biosynthesis proteins Superfamily:Molybdenum cofactor biosynthesis proteins Family:MogA-like 90 d2f7wa1 not modelled 74.9 10 Fold:Molybdenum cofactor biosynthesis proteins Superfamily:Molybdenum cofactor biosynthesis proteins Family:MogA-like 91 c3gd5D_ not modelled 74.4 17 PDB header:transferase Chain: D: PDB Molecule:ornithine carbamoyltransferase; PDBTitle: crystal structure of ornithine carbamoyltransferase from gloeobacter2 violaceus 92 c2vxoB_ not modelled 73.9 9 PDB header:ligase Chain: B: PDB Molecule:gmp synthase [glutamine-hydrolyzing]; PDBTitle: human gmp synthetase in complex with xmp 93 d1ybha3 not modelled 73.6 16 Fold:Thiamin diphosphate-binding fold (THDP-binding) Superfamily:Thiamin diphosphate-binding fold (THDP-binding) Family:Pyruvate oxidase and decarboxylase PP module 94 d1vh3a_ not modelled 73.4 11 Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:Cytidylytransferase 95 d1h6da1 not modelled 72.3 10 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 96 c3ketA_ not modelled 72.1 13 PDB header:transcription/dna Chain: A: PDB Molecule:redox-sensing transcriptional repressor rex; PDBTitle: crystal structure of a rex-family transcriptional regulatory protein2 from streptococcus agalactiae bound to a palindromic operator 97 c1xeaD_ not modelled 71.9 16 PDB header:oxidoreductase Chain: D: PDB Molecule:oxidoreductase, gfo/idh/moca family; PDBTitle: crystal structure of a gfo/idh/moca family oxidoreductase2 from vibrio cholerae 98 d1jlja_ not modelled 71.8 13 Fold:Molybdenum cofactor biosynthesis proteins Superfamily:Molybdenum cofactor biosynthesis proteins Family:MogA-like 99 c3moiA_ not modelled 71.6 19 PDB header:oxidoreductase Chain: A: PDB Molecule:probable dehydrogenase; PDBTitle: the crystal structure of the putative dehydrogenase from bordetella2 bronchiseptica rb50 100 d1tq8a_ not modelled 71.0 11 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Adenine nucleotide alpha hydrolases-like Family:Universal stress protein-like 101 c3db2C_ not modelled 70.8 4 PDB header:oxidoreductase Chain: C: PDB Molecule:putative nadph-dependent oxidoreductase; PDBTitle: crystal structure of a putative nadph-dependent oxidoreductase2 (dhaf_2064) from desulfitobacterium hafniense dcb-2 at 1.70 a3 resolution 102 c1evjC_ not modelled 69.8 11 PDB header:oxidoreductase Chain: C: PDB Molecule:glucose-fructose oxidoreductase; PDBTitle: crystal structure of glucose-fructose oxidoreductase (gfor)2 delta1-22 s64d 103 c1zh8B_ not modelled 69.4 17 PDB header:oxidoreductase Chain: B: PDB Molecule:oxidoreductase; PDBTitle: crystal structure of oxidoreductase (tm0312) from thermotoga maritima2 at 2.50 a resolution 104 d2hmfa2 not modelled 69.4 16 Fold:Ferredoxin-like Superfamily:ACT-like Family:Aspartokinase allosteric domain-like 105 d3bula2 not modelled 69.2 14 Fold:Flavodoxin-like Superfamily:Cobalamin (vitamin B12)-binding domain Family:Cobalamin (vitamin B12)-binding domain 106 d2djia3 not modelled 68.8 18 Fold:Thiamin diphosphate-binding fold (THDP-binding) Superfamily:Thiamin diphosphate-binding fold (THDP-binding) Family:Pyruvate oxidase and decarboxylase PP module 107 d1mvla_ not modelled 68.6 14 Fold:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD Superfamily:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD Family:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD 108 c1mvlA_ not modelled 68.6 14 PDB header:lyase Chain: A: PDB Molecule:ppc decarboxylase athal3a; PDBTitle: ppc decarboxylase mutant c175s 109 d1vl2a1 not modelled 68.5 19 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Adenine nucleotide alpha hydrolases-like Family:N-type ATP pyrophosphatases 110 c1jscA_ not modelled 68.3 20 PDB header:lyase Chain: A: PDB Molecule:acetohydroxy-acid synthase; PDBTitle: crystal structure of the catalytic subunit of yeast2 acetohydroxyacid synthase: a target for herbicidal3 inhibitors 111 d2qmwa2 not modelled 68.0 13 Fold:Ferredoxin-like Superfamily:ACT-like Family:Phenylalanine metabolism regulatory domain 112 d2nqra3 not modelled 66.6 13 Fold:Molybdenum cofactor biosynthesis proteins Superfamily:Molybdenum cofactor biosynthesis proteins Family:MoeA central domain-like 113 c2eghA_ not modelled 65.9 12 PDB header:oxidoreductase Chain: A: PDB Molecule:1-deoxy-d-xylulose 5-phosphate reductoisomerase; PDBTitle: crystal structure of 1-deoxy-d-xylulose 5-phosphate reductoisomerase2 complexed with a magnesium ion, nadph and fosmidomycin 114 d1a9xa4 not modelled 65.6 13 Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:BC N-terminal domain-like 115 c2ho3D_ not modelled 65.6 14 PDB header:oxidoreductase Chain: D: PDB Molecule:oxidoreductase, gfo/idh/moca family; PDBTitle: crystal structure of oxidoreductase, gfo/idh/moca family from2 streptococcus pneumoniae 116 c2glxD_ not modelled 62.8 10 PDB header:oxidoreductase Chain: D: PDB Molecule:1,5-anhydro-d-fructose reductase; PDBTitle: crystal structure analysis of bacterial 1,5-af reductase 117 d2nvwa1 not modelled 62.7 8 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 118 d1q6za3 not modelled 61.5 16 Fold:Thiamin diphosphate-binding fold (THDP-binding) Superfamily:Thiamin diphosphate-binding fold (THDP-binding) Family:Pyruvate oxidase and decarboxylase PP module 119 c3rbvA_ not modelled 61.1 19 PDB header:sugar binding protein Chain: A: PDB Molecule:sugar 3-ketoreductase; PDBTitle: crystal structure of kijd10, a 3-ketoreductase from actinomadura2 kijaniata incomplex with nadp 120 c2ag1A_ not modelled 61.0 16 PDB header:lyase Chain: A: PDB Molecule:benzaldehyde lyase; PDBTitle: crystal structure of benzaldehyde lyase (bal)- semet

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction

Transmembrane helices have been predicted in your sequence to adopt the topology shown below

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0