PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1h6dL_

Fold library id	PDB Header	Molecule	Title
c1h6dL_	PDB header: protein translocation	Chain: L: PDB Molecule: precursor form of glucose-fructose	PDBTitle: oxidized precursor form of glucose-fructose oxidoreductase2 from zymomonas mobilis complexed with glycerol

Links to external resources
Added to library: Tue Mar 16 14:11:41 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A T L P A G A S Q V P T T P A G R P M P Y A I R P M P E D R R F G Y A I V G L G K Y A L N Q I L P G F A G C Q H S R I E A L V S G N A E K A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S
S S
S S
S T T T T
S S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K I V A A E Y G V D P R K I Y D Y S N F D K I A K D P K I D A V Y I I L P N S L H A E F A I R A F K A G K H V M C E K P M A T S V A D C Q R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
G G G
S S G G G G G G G
T T
S
G G G T T
S S
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence M I D A A K A A N K K L M I G Y R C H Y D P M N R A A V K L I R E N Q L G K L G M V T T D N S D V M D Q N D P A Q Q W R L R R E L A G G G S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
G G G G
T T T T
S
T T S G G G
S S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence L M D I G I Y G L N G T R Y L L G E E P I E V R A Y T Y S D P N D E R F V E V E D R I I W Q M R F R S G A L S H G A S S Y S T T T T S R F S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T T
G G G S S S
S T T S
S S S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence V Q G D K A V L L M D P A T G Y Y Q N L I S V Q T P G H A N Q S M M P Q F I M P A N N Q F S A Q L D H L A E A V I N N K P V R S P G E E G M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
S S S S
S S
T T
S S
S S
T T
S S B

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 .

Sequence Q D V R L I Q A I Y E A A R T G R P V N T D W G Y V R Q G G Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
S
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	T	L	P	A	G	A	S	Q	V	P	T	T	P	A	G	R	P	M	P	Y	A	I	R	P	M	P	E	D	R	R	F	G	Y	A	I	V	G	L	G	K	Y	A	L	N	Q	I	L	P	G	F	A	G	C	Q	H	S	R	I	E	A	L	V	S	G	N	A	E	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	S		S	S										S	S																S						T					T	T	T		S	S									S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	I	V	A	A	E	Y	G	V	D	P	R	K	I	Y	D	Y	S	N	F	D	K	I	A	K	D	P	K	I	D	A	V	Y	I	I	L	P	N	S	L	H	A	E	F	A	I	R	A	F	K	A	G	K	H	V	M	C	E	K	P	M	A	T	S	V	A	D	C	Q	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T			G	G	G				S	S	G	G	G	G	G	G	G		T	T								S		G	G	G											T	T							S	S			S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	M	I	D	A	A	K	A	A	N	K	K	L	M	I	G	Y	R	C	H	Y	D	P	M	N	R	A	A	V	K	L	I	R	E	N	Q	L	G	K	L	G	M	V	T	T	D	N	S	D	V	M	D	Q	N	D	P	A	Q	Q	W	R	L	R	R	E	L	A	G	G	G	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T								G	G	G	G													T	T	T	T		S														T	T	S					G	G	G						S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	M	D	I	G	I	Y	G	L	N	G	T	R	Y	L	L	G	E	E	P	I	E	V	R	A	Y	T	Y	S	D	P	N	D	E	R	F	V	E	V	E	D	R	I	I	W	Q	M	R	F	R	S	G	A	L	S	H	G	A	S	S	Y	S	T	T	T	T	S	R	F	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T													T	S													T	T		G	G	G	S	S	S		S									T	T	S									S	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	V	Q	G	D	K	A	V	L	L	M	D	P	A	T	G	Y	Y	Q	N	L	I	S	V	Q	T	P	G	H	A	N	Q	S	M	M	P	Q	F	I	M	P	A	N	N	Q	F	S	A	Q	L	D	H	L	A	E	A	V	I	N	N	K	P	V	R	S	P	G	E	E	G	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S						S	S	S	S		S	S									T	T									S	S			S	S																	T	T				S	S	B
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Sequence	Q	D	V	R	L	I	Q	A	I	Y	E	A	A	R	T	G	R	P	V	N	T	D	W	G	Y	V	R	Q	G	G	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S	S						S					T	T