Email l.a.kelley@imperial.ac.uk Description P14407 Date Thu Jan 5 11:34:03 GMT 2012 Unique Job ID 8ddc337b235d61fb

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2isba1 100.0 31 Fold:The "swivelling" beta/beta/alpha domain Superfamily:FumA C-terminal domain-like Family:FumA C-terminal domain-like 2 d1ed7a_ 58.8 12 Fold:WW domain-like Superfamily:Carbohydrate binding domain Family:Carbohydrate binding domain 3 c1k98A_ 53.2 21 PDB header:transferase Chain: A: PDB Molecule:methionine synthase; PDBTitle: adomet complex of meth c-terminal fragment 4 c3fpnA_ 51.0 21 PDB header:dna binding protein Chain: A: PDB Molecule:geobacillus stearothermophilus uvra interaction PDBTitle: crystal structure of uvra-uvrb interaction domains 5 c2xmoB_ 38.2 18 PDB header:hydrolase Chain: B: PDB Molecule:lmo2642 protein; PDBTitle: the crystal structure of lmo2642 6 d1ei5a2 37.1 25 Fold:Streptavidin-like Superfamily:D-aminopeptidase, middle and C-terminal domains Family:D-aminopeptidase, middle and C-terminal domains 7 c3l07B_ 36.5 17 PDB header:oxidoreductase,hydrolase Chain: B: PDB Molecule:bifunctional protein fold; PDBTitle: methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate2 cyclohydrolase, putative bifunctional protein fold from francisella3 tularensis. 8 d3bula2 36.4 25 Fold:Flavodoxin-like Superfamily:Cobalamin (vitamin B12)-binding domain Family:Cobalamin (vitamin B12)-binding domain 9 c3p2oA_ 35.8 18 PDB header:oxidoreductase, hydrolase Chain: A: PDB Molecule:bifunctional protein fold; PDBTitle: crystal structure of fold bifunctional protein from campylobacter2 jejuni 10 d12asa_ 34.3 18 Fold:Class II aaRS and biotin synthetases Superfamily:Class II aaRS and biotin synthetases Family:Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain 11 c3p2oB_ 32.4 18 PDB header:oxidoreductase, hydrolase Chain: B: PDB Molecule:bifunctional protein fold; PDBTitle: crystal structure of fold bifunctional protein from campylobacter2 jejuni 12 c2zoeA_ 31.2 23 PDB header:toxin Chain: A: PDB Molecule:hemagglutinin components ha3; PDBTitle: ha3 subcomponent of clostridium botulinum type c progenitor2 toxin, complex with n-acetylneuramic acid 13 c2d49A_ 28.5 18 PDB header:hydrolase Chain: A: PDB Molecule:chitinase c; PDBTitle: solution structure of the chitin-binding domain of2 streptomyces griseus chitinase c 14 c2c2xB_ 28.4 14 PDB header:oxidoreductase Chain: B: PDB Molecule:methylenetetrahydrofolate dehydrogenase- PDBTitle: three dimensional structure of bifunctional2 methylenetetrahydrofolate dehydrogenase-cyclohydrolase3 from mycobacterium tuberculosis 15 c2e0iD_ 28.3 12 PDB header:lyase Chain: D: PDB Molecule:432aa long hypothetical deoxyribodipyrimidine photolyase; PDBTitle: crystal structure of archaeal photolyase from sulfolobus tokodaii with2 two fad molecules: implication of a novel light-harvesting cofactor 16 d1a4ia2 26.5 16 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Tetrahydrofolate dehydrogenase/cyclohydrolase 17 d1aiwa_ 25.7 7 Fold:WW domain-like Superfamily:Carbohydrate binding domain Family:Carbohydrate binding domain 18 d2piea1 25.4 21 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain 19 d1vkza2 24.2 21 Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:BC N-terminal domain-like 20 d1yqea1 24.1 8 Fold:Phosphorylase/hydrolase-like Superfamily:AF0625-like Family:AF0625-like 21 c2gfqC_ not modelled 23.6 9 PDB header:structural genomics, unknown function Chain: C: PDB Molecule:upf0204 protein ph0006; PDBTitle: structure of protein of unknown function ph0006 from pyrococcus2 horikoshii 22 c3lzkC_ not modelled 23.4 18 PDB header:hydrolase Chain: C: PDB Molecule:fumarylacetoacetate hydrolase family protein; PDBTitle: the crystal structure of a probably aromatic amino acid2 degradation protein from sinorhizobium meliloti 1021 23 c3cr8C_ not modelled 22.7 27 PDB header:transferase Chain: C: PDB Molecule:sulfate adenylyltranferase, adenylylsulfate PDBTitle: hexameric aps kinase from thiobacillus denitrificans 24 d1b8aa1 not modelled 22.6 6 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Anticodon-binding domain 25 d1goia1 not modelled 21.8 18 Fold:WW domain-like Superfamily:Carbohydrate binding domain Family:Carbohydrate binding domain 26 d1o6aa_ not modelled 21.5 13 Fold:Surface presentation of antigens (SPOA) Superfamily:Surface presentation of antigens (SPOA) Family:Surface presentation of antigens (SPOA) 27 d1v58a1 not modelled 21.3 13 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:DsbC/DsbG C-terminal domain-like 28 d2gqba1 not modelled 21.2 35 Fold:RPA2825-like Superfamily:RPA2825-like Family:RPA2825-like 29 c3orsD_ not modelled 21.1 14 PDB header:isomerase,biosynthetic protein Chain: D: PDB Molecule:n5-carboxyaminoimidazole ribonucleotide mutase; PDBTitle: crystal structure of n5-carboxyaminoimidazole ribonucleotide mutase2 from staphylococcus aureus 30 d2gfqa1 not modelled 20.5 9 Fold:Phosphorylase/hydrolase-like Superfamily:AF0625-like Family:AF0625-like 31 c2crvA_ not modelled 19.6 18 PDB header:translation Chain: A: PDB Molecule:translation initiation factor if-2; PDBTitle: solution structure of c-terminal domain of mitochondrial2 translational initiationfactor 2 32 d1vjea_ not modelled 19.3 25 Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:Autoinducer-2 production protein LuxS 33 d1ooya2 not modelled 19.2 19 Fold:NagB/RpiA/CoA transferase-like Superfamily:NagB/RpiA/CoA transferase-like Family:CoA transferase alpha subunit-like 34 d1muja2 not modelled 18.4 35 Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain 35 d1ni9a_ not modelled 18.1 23 Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:GlpX-like bacterial fructose-1,6-bisphosphatase 36 c3trhI_ not modelled 17.8 10 PDB header:lyase Chain: I: PDB Molecule:phosphoribosylaminoimidazole carboxylase PDBTitle: structure of a phosphoribosylaminoimidazole carboxylase catalytic2 subunit (pure) from coxiella burnetii 37 c2j7pA_ not modelled 17.4 17 PDB header:signal recognition Chain: A: PDB Molecule:signal recognition particle protein; PDBTitle: gmppnp-stabilized ng domain complex of the srp gtpases ffh2 and ftsy 38 c3uotB_ not modelled 17.3 6 PDB header:cell cycle Chain: B: PDB Molecule:mediator of dna damage checkpoint protein 1; PDBTitle: crystal structure of mdc1 fha domain in complex with a phosphorylated2 peptide from the mdc1 n-terminus 39 d2piaa1 not modelled 17.1 0 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 40 c2qv6D_ not modelled 17.0 9 PDB header:hydrolase Chain: D: PDB Molecule:gtp cyclohydrolase iii; PDBTitle: gtp cyclohydrolase iii from m. jannaschii (mj0145)2 complexed with gtp and metal ions 41 d1edza2 not modelled 17.0 10 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Tetrahydrofolate dehydrogenase/cyclohydrolase 42 d2cp6a1 not modelled 16.5 15 Fold:SH3-like barrel Superfamily:Cap-Gly domain Family:Cap-Gly domain 43 d2oz4a1 not modelled 16.2 31 Fold:Immunoglobulin-like beta-sandwich Superfamily:Immunoglobulin Family:C2 set domains 44 d1j98a_ not modelled 16.1 45 Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:Autoinducer-2 production protein LuxS 45 d2vzsa5 not modelled 16.1 15 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:beta-glycanases 46 d1g3ga_ not modelled 16.0 17 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain 47 d1fnda1 not modelled 15.8 29 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 48 c3ff4A_ not modelled 15.6 10 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of uncharacterized protein chu_1412 49 d2eyqa1 not modelled 15.5 6 Fold:SH3-like barrel Superfamily:CarD-like Family:CarD-like 50 c3c00B_ not modelled 15.1 11 PDB header:membrane protein, protein transport Chain: B: PDB Molecule:escu; PDBTitle: crystal structural of the mutated g247t escu/spas c-terminal domain 51 c3eeqB_ not modelled 15.0 31 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative cobalamin biosynthesis protein g PDBTitle: crystal structure of a putative cobalamin biosynthesis2 protein g homolog from sulfolobus solfataricus 52 d1jr2a_ not modelled 14.8 21 Fold:HemD-like Superfamily:HemD-like Family:HemD-like 53 c1jr2A_ not modelled 14.8 21 PDB header:lyase Chain: A: PDB Molecule:uroporphyrinogen-iii synthase; PDBTitle: structure of uroporphyrinogen iii synthase 54 d1n0ua3 not modelled 14.7 10 Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:Translational machinery components 55 c2l9dA_ not modelled 14.7 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution structure of the protein yp_546394.1, the first structural2 representative of the pfam family pf12112 56 d1uhta_ not modelled 14.4 13 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain 57 d1sf8a_ not modelled 14.0 23 Fold:HSP90 C-terminal domain Superfamily:HSP90 C-terminal domain Family:HSP90 C-terminal domain 58 c2iheA_ not modelled 13.9 15 PDB header:dna binding protein Chain: A: PDB Molecule:single-stranded dna-binding protein; PDBTitle: crystal structure of wild-type single-stranded dna binding protein2 from thermus aquaticus 59 c3kw0D_ not modelled 13.4 12 PDB header:hydrolase Chain: D: PDB Molecule:cysteine peptidase; PDBTitle: crystal structure of cysteine peptidase (np_982244.1) from bacillus2 cereus atcc 10987 at 2.50 a resolution 60 d1a5ra_ not modelled 13.4 11 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 61 c3qq5A_ not modelled 13.3 20 PDB header:oxidoreductase Chain: A: PDB Molecule:small gtp-binding protein; PDBTitle: crystal structure of the [fefe]-hydrogenase maturation protein hydf 62 d1owla1 not modelled 13.0 14 Fold:Cryptochrome/photolyase FAD-binding domain Superfamily:Cryptochrome/photolyase FAD-binding domain Family:Cryptochrome/photolyase FAD-binding domain 63 c3fmxX_ not modelled 13.0 17 PDB header:oxidoreductase Chain: X: PDB Molecule:tartrate dehydrogenase/decarboxylase; PDBTitle: crystal structure of tartrate dehydrogenase from pseudomonas2 putida complexed with nadh 64 c1tezB_ not modelled 12.9 14 PDB header:lyase/dna Chain: B: PDB Molecule:deoxyribodipyrimidine photolyase; PDBTitle: complex between dna and the dna photolyase from anacystis nidulans 65 d1es0a2 not modelled 12.8 35 Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain 66 c3mxnB_ not modelled 12.6 24 PDB header:replication Chain: B: PDB Molecule:recq-mediated genome instability protein 2; PDBTitle: crystal structure of the rmi core complex 67 c3cyyA_ not modelled 12.5 22 PDB header:peptide binding protein Chain: A: PDB Molecule:tight junction protein zo-1; PDBTitle: the crystal structure of zo-1 pdz2 in complex with the cx43 peptide 68 c2jlhA_ not modelled 12.5 13 PDB header:protein transport Chain: A: PDB Molecule:yop proteins translocation protein u; PDBTitle: crystal structure of the cytoplasmic domain of yersinia2 pestis yscu n263a mutant 69 c3en2A_ not modelled 12.4 20 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:probable primosomal replication protein n; PDBTitle: three-dimensional structure of the protein prib from2 ralstonia solanacearum at the resolution 2.3a. northeast3 structural genomics consortium target rsr213c. 70 d2gc6a1 not modelled 12.4 18 Fold:MurD-like peptide ligases, peptide-binding domain Superfamily:MurD-like peptide ligases, peptide-binding domain Family:Folylpolyglutamate synthetase, C-terminal domain 71 d1u3da1 not modelled 12.3 20 Fold:Cryptochrome/photolyase FAD-binding domain Superfamily:Cryptochrome/photolyase FAD-binding domain Family:Cryptochrome/photolyase FAD-binding domain 72 c3chvA_ not modelled 12.3 18 PDB header:metal binding protein Chain: A: PDB Molecule:prokaryotic domain of unknown function (duf849) with a tim PDBTitle: crystal structure of a prokaryotic domain of unknown function (duf849)2 member (spoa0042) from silicibacter pomeroyi dss-3 at 1.45 a3 resolution 73 c1a4iB_ not modelled 12.0 16 PDB header:oxidoreductase Chain: B: PDB Molecule:methylenetetrahydrofolate dehydrogenase / PDBTitle: human tetrahydrofolate dehydrogenase / cyclohydrolase 74 c3ibgF_ not modelled 12.0 17 PDB header:hydrolase Chain: F: PDB Molecule:atpase, subunit of the get complex; PDBTitle: crystal structure of aspergillus fumigatus get3 with bound2 adp 75 c2oqjF_ not modelled 11.9 71 PDB header:immune system Chain: F: PDB Molecule:peptide 2g12.1 (acppshvldmrsgtclaaegk); PDBTitle: crystal structure analysis of fab 2g12 in complex with peptide 2g12.1 76 d2coza1 not modelled 11.8 16 Fold:SH3-like barrel Superfamily:Cap-Gly domain Family:Cap-Gly domain 77 c3o59X_ not modelled 11.6 46 PDB header:transferase Chain: X: PDB Molecule:dna polymerase ii large subunit; PDBTitle: dna polymerase d large subunit dp2(1-300) from pyrococcus horikoshii 78 c3t7yB_ not modelled 11.6 11 PDB header:protein transport Chain: B: PDB Molecule:yop proteins translocation protein u; PDBTitle: structure of an autocleavage-inactive mutant of the cytoplasmic domain2 of ct091, the yscu homologue of chlamydia trachomatis 79 d2f2ab1 not modelled 11.5 19 Fold:GatB/YqeY motif Superfamily:GatB/YqeY motif Family:GatB/GatE C-terminal domain-like 80 d1c0aa1 not modelled 11.5 21 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Anticodon-binding domain 81 d2cnda1 not modelled 11.4 25 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 82 d4ubpb_ not modelled 11.1 17 Fold:beta-clip Superfamily:Urease, beta-subunit Family:Urease, beta-subunit 83 d1o9ya_ not modelled 11.1 20 Fold:Surface presentation of antigens (SPOA) Superfamily:Surface presentation of antigens (SPOA) Family:Surface presentation of antigens (SPOA) 84 d1e9ya1 not modelled 11.0 12 Fold:beta-clip Superfamily:Urease, beta-subunit Family:Urease, beta-subunit 85 d2ew0a1 not modelled 11.0 22 Fold:VC0467-like Superfamily:VC0467-like Family:VC0467-like 86 c3d8tB_ not modelled 10.9 20 PDB header:lyase Chain: B: PDB Molecule:uroporphyrinogen-iii synthase; PDBTitle: thermus thermophilus uroporphyrinogen iii synthase 87 c2oqjL_ not modelled 10.8 71 PDB header:immune system Chain: L: PDB Molecule:peptide 2g12.1 (acppshvldmrsgtclaaegk); PDBTitle: crystal structure analysis of fab 2g12 in complex with peptide 2g12.1 88 c2oqjI_ not modelled 10.8 71 PDB header:immune system Chain: I: PDB Molecule:peptide 2g12.1 (acppshvldmrsgtclaaegk); PDBTitle: crystal structure analysis of fab 2g12 in complex with peptide 2g12.1 89 c2oqjC_ not modelled 10.8 71 PDB header:immune system Chain: C: PDB Molecule:peptide 2g12.1 (acppshvldmrsgtclaaegk); PDBTitle: crystal structure analysis of fab 2g12 in complex with peptide 2g12.1 90 d1e32a1 not modelled 10.8 10 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Cdc48 N-terminal domain-like 91 d1pcfa_ not modelled 10.6 47 Fold:ssDNA-binding transcriptional regulator domain Superfamily:ssDNA-binding transcriptional regulator domain Family:Transcriptional coactivator PC4 C-terminal domain 92 c3rfuC_ not modelled 10.4 15 PDB header:hydrolase, membrane protein Chain: C: PDB Molecule:copper efflux atpase; PDBTitle: crystal structure of a copper-transporting pib-type atpase 93 c1zgxA_ not modelled 10.3 18 PDB header:hydrolase Chain: A: PDB Molecule:guanyl-specific ribonuclease sa; PDBTitle: crystal structure of ribonuclease mutant 94 c2ihfA_ not modelled 10.3 15 PDB header:dna binding protein Chain: A: PDB Molecule:single-stranded dna-binding protein; PDBTitle: crystal structure of deletion mutant delta 228-252 r190a of the2 single-stranded dna binding protein from thermus aquaticus 95 d1sm4a1 not modelled 10.2 21 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 96 d1qx4a1 not modelled 10.2 14 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 97 d1xnea_ not modelled 10.2 15 Fold:PUA domain-like Superfamily:PUA domain-like Family:ProFAR isomerase associated domain 98 d1krha1 not modelled 10.1 29 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 99 c3op0B_ not modelled 10.1 58 PDB header:signaling protein/signaling protein regu Chain: B: PDB Molecule:signal transduction protein cbl-c; PDBTitle: crystal structure of cbl-c (cbl-3) tkb domain in complex with egfr2 py1069 peptide