Email l.a.kelley@imperial.ac.uk Description Q57261 Date Thu Jan 5 12:37:16 GMT 2012 Unique Job ID 864b5dabd8592a80

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1sb7A_ 100.0 99 PDB header:lyase Chain: A: PDB Molecule:trna pseudouridine synthase d; PDBTitle: crystal structure of the e.coli pseudouridine synthase trud 2 d1szwa_ 100.0 99 Fold:Pseudouridine synthase Superfamily:Pseudouridine synthase Family:tRNA pseudouridine synthase TruD 3 c1z2zB_ 100.0 26 PDB header:lyase Chain: B: PDB Molecule:probable trna pseudouridine synthase d; PDBTitle: crystal structure of the putative trna pseudouridine2 synthase d (trud) from methanosarcina mazei, northeast3 structural genomics target mar1 4 d1k8wa5 86.5 12 Fold:Pseudouridine synthase Superfamily:Pseudouridine synthase Family:Pseudouridine synthase II TruB 5 d1r3ea2 84.1 16 Fold:Pseudouridine synthase Superfamily:Pseudouridine synthase Family:Pseudouridine synthase II TruB 6 d2cx6a1 83.6 16 Fold:Barstar-like Superfamily:Barstar-related Family:Barstar-related 7 c1sgvA_ 81.8 16 PDB header:lyase Chain: A: PDB Molecule:trna pseudouridine synthase b; PDBTitle: structure of trna psi55 pseudouridine synthase (trub) 8 d2ey4a2 81.6 17 Fold:Pseudouridine synthase Superfamily:Pseudouridine synthase Family:Pseudouridine synthase II TruB 9 d2apoa2 78.3 16 Fold:Pseudouridine synthase Superfamily:Pseudouridine synthase Family:Pseudouridine synthase II TruB 10 d1sgva2 75.0 15 Fold:Pseudouridine synthase Superfamily:Pseudouridine synthase Family:Pseudouridine synthase II TruB 11 c1k8wA_ 72.8 11 PDB header:lyase/rna Chain: A: PDB Molecule:trna pseudouridine synthase b; PDBTitle: crystal structure of the e. coli pseudouridine synthase2 trub bound to a t stem-loop rna 12 c1ze2B_ 68.4 33 PDB header:lyase/rna Chain: B: PDB Molecule:trna pseudouridine synthase b; PDBTitle: conformational change of pseudouridine 55 synthase upon its2 association with rna substrate 13 d1ay7b_ 62.7 20 Fold:Barstar-like Superfamily:Barstar-related Family:Barstar-related 14 c2apoA_ 53.9 16 PDB header:isomerase/rna binding protein Chain: A: PDB Molecule:probable trna pseudouridine synthase b; PDBTitle: crystal structure of the methanococcus jannaschii cbf52 nop10 complex 15 c3uaiA_ 48.5 10 PDB header:isomerase/chaperone Chain: A: PDB Molecule:h/aca ribonucleoprotein complex subunit 4; PDBTitle: structure of the shq1-cbf5-nop10-gar1 complex from saccharomyces2 cerevisiae 16 c2ey4A_ 43.6 13 PDB header:isomerase/biosynthetic protein Chain: A: PDB Molecule:probable trna pseudouridine synthase b; PDBTitle: crystal structure of a cbf5-nop10-gar1 complex 17 d1yh5a1 38.7 19 Fold:YggU-like Superfamily:YggU-like Family:YggU-like 18 d1llda2 33.0 9 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:Lactate & malate dehydrogenases, C-terminal domain 19 c2dceA_ 31.2 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:kiaa1915 protein; PDBTitle: solution structure of the swirm domain of human kiaa19152 protein 20 d2j85a1 30.7 13 Fold:STIV B116-like Superfamily:STIV B116-like Family:STIV B116-like 21 d1mlda2 not modelled 26.9 13 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:Lactate & malate dehydrogenases, C-terminal domain 22 c2km1A_ not modelled 26.6 19 PDB header:protein binding Chain: A: PDB Molecule:protein dre2; PDBTitle: solution structure of the n-terminal domain of the yeast protein dre2 23 d5mdha2 not modelled 26.3 14 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:Lactate & malate dehydrogenases, C-terminal domain 24 d1utaa_ not modelled 26.2 15 Fold:Ferredoxin-like Superfamily:Sporulation related repeat Family:Sporulation related repeat 25 d1t2da2 not modelled 26.2 19 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:Lactate & malate dehydrogenases, C-terminal domain 26 d2j6ba1 not modelled 26.0 14 Fold:STIV B116-like Superfamily:STIV B116-like Family:STIV B116-like 27 d1oc4a2 not modelled 25.8 18 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:Lactate & malate dehydrogenases, C-terminal domain 28 c3kopB_ not modelled 25.5 29 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of protein with a cyclophilin-like fold2 (yp_831253.1) from arthrobacter sp. fb24 at 1.90 a resolution 29 d1ez4a2 not modelled 25.4 22 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:Lactate & malate dehydrogenases, C-terminal domain 30 d1b8pa2 not modelled 25.2 5 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:Lactate & malate dehydrogenases, C-terminal domain 31 d1hyha2 not modelled 25.0 19 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:Lactate & malate dehydrogenases, C-terminal domain 32 c2v9vA_ not modelled 24.9 15 PDB header:transcription Chain: A: PDB Molecule:selenocysteine-specific elongation factor; PDBTitle: crystal structure of moorella thermoacetica selb(377-511) 33 d7mdha2 not modelled 24.7 18 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:Lactate & malate dehydrogenases, C-terminal domain 34 c2kvrA_ not modelled 24.6 5 PDB header:protein binding Chain: A: PDB Molecule:ubiquitin carboxyl-terminal hydrolase 7; PDBTitle: solution nmr structure of human ubiquitin specific protease2 usp7 ubl domain (residues 537-664). nesg target hr4395c/3 sgc-toronto 35 d1gv0a2 not modelled 24.6 14 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:Lactate & malate dehydrogenases, C-terminal domain 36 c3hskB_ not modelled 24.5 11 PDB header:oxidoreductase Chain: B: PDB Molecule:aspartate-semialdehyde dehydrogenase; PDBTitle: crystal structure of aspartate semialdehyde dehydrogenase2 with nadp from candida albicans 37 d1obba2 not modelled 24.2 19 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:AglA-like glucosidase 38 d9ldta2 not modelled 24.2 10 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:Lactate & malate dehydrogenases, C-terminal domain 39 d2cmda2 not modelled 24.0 13 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:Lactate & malate dehydrogenases, C-terminal domain 40 d1guza2 not modelled 22.9 10 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:Lactate & malate dehydrogenases, C-terminal domain 41 d1o6za2 not modelled 22.4 9 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:Lactate & malate dehydrogenases, C-terminal domain 42 c3f1xA_ not modelled 21.7 12 PDB header:transferase Chain: A: PDB Molecule:serine acetyltransferase; PDBTitle: three dimensional structure of the serine acetyltransferase from2 bacteroides vulgatus, northeast structural genomics consortium target3 bvr62. 43 d1uxja2 not modelled 21.3 10 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:Lactate & malate dehydrogenases, C-terminal domain 44 d1pzga2 not modelled 21.2 19 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:Lactate & malate dehydrogenases, C-terminal domain 45 d1civa2 not modelled 21.1 18 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:Lactate & malate dehydrogenases, C-terminal domain 46 d1hyea2 not modelled 21.1 32 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:Lactate & malate dehydrogenases, C-terminal domain 47 c3mpoD_ not modelled 21.0 15 PDB header:hydrolase Chain: D: PDB Molecule:predicted hydrolase of the had superfamily; PDBTitle: the crystal structure of a hydrolase from lactobacillus brevis 48 d1y7ta2 not modelled 21.0 14 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:Lactate & malate dehydrogenases, C-terminal domain 49 d1i0za2 not modelled 21.0 17 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:Lactate & malate dehydrogenases, C-terminal domain 50 d1ldma2 not modelled 20.9 10 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:Lactate & malate dehydrogenases, C-terminal domain 51 d2dw4a1 not modelled 20.8 17 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:SWIRM domain 52 c3lhoA_ not modelled 20.8 17 PDB header:hydrolase Chain: A: PDB Molecule:putative hydrolase; PDBTitle: crystal structure of putative hydrolase (yp_751971.1) from shewanella2 frigidimarina ncimb 400 at 1.80 a resolution 53 d1zpwx1 not modelled 20.8 10 Fold:Ferredoxin-like Superfamily:TTP0101/SSO1404-like Family:TTP0101/SSO1404-like 54 d1w4xa1 not modelled 20.6 67 Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:FAD/NAD-linked reductases, N-terminal and central domains 55 d2nn4a1 not modelled 20.1 25 Fold:YqgQ-like Superfamily:YqgQ-like Family:YqgQ-like 56 d1ldna2 not modelled 19.7 14 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:Lactate & malate dehydrogenases, C-terminal domain 57 d1a5za2 not modelled 19.7 19 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:Lactate & malate dehydrogenases, C-terminal domain 58 d1llca2 not modelled 19.7 21 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:Lactate & malate dehydrogenases, C-terminal domain 59 d1i10a2 not modelled 19.1 10 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:Lactate & malate dehydrogenases, C-terminal domain 60 d2pg4a1 not modelled 19.0 23 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:F93-like 61 c3cjlA_ not modelled 18.6 24 PDB header:unknown function Chain: A: PDB Molecule:domain of unknown function; PDBTitle: crystal structure of a protein of unknown function (eca1910) from2 pectobacterium atrosepticum scri1043 at 2.20 a resolution 62 d2fq3a1 not modelled 17.8 14 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:SWIRM domain 63 d2dkya1 not modelled 17.3 18 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:Variant SAM domain 64 d2g17a1 not modelled 17.0 11 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 65 d1vkna1 not modelled 16.9 11 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 66 d2h80a1 not modelled 16.6 18 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:Variant SAM domain 67 c2hjsA_ not modelled 16.2 10 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:usg-1 protein homolog; PDBTitle: the structure of a probable aspartate-semialdehyde dehydrogenase from2 pseudomonas aeruginosa 68 d2v9va2 not modelled 16.1 17 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:C-terminal fragment of elongation factor SelB 69 d2hjsa1 not modelled 16.0 0 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 70 c2zv3E_ not modelled 15.6 13 PDB header:hydrolase Chain: E: PDB Molecule:peptidyl-trna hydrolase; PDBTitle: crystal structure of project mj0051 from methanocaldococcus2 jannaschii dsm 2661 71 d2ox7a1 not modelled 15.4 45 Fold:YopX-like Superfamily:YopX-like Family:YopX-like 72 d2ldxa2 not modelled 15.4 5 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:Lactate & malate dehydrogenases, C-terminal domain 73 c3kubA_ not modelled 15.2 0 PDB header:oxidoreductase Chain: A: PDB Molecule:aspartate-semialdehyde dehydrogenase; PDBTitle: crystal structure of aspartate semi-aldehyde dehydrogenase complexed2 with glycerol and phosphate of mycobacterium tuberculosis h37rv 74 c1mb4B_ not modelled 14.9 0 PDB header:oxidoreductase Chain: B: PDB Molecule:aspartate-semialdehyde dehydrogenase; PDBTitle: crystal structure of aspartate semialdehyde dehydrogenase2 from vibrio cholerae with nadp and s-methyl-l-cysteine3 sulfoxide 75 d1y6ja2 not modelled 14.7 14 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:Lactate & malate dehydrogenases, C-terminal domain 76 d2q49a1 not modelled 14.7 11 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 77 c3h92A_ not modelled 14.3 27 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized atp-binding protein mjecl15; PDBTitle: the crystal structure of one domain of the protein with unknown2 function from methanocaldococcus jannaschii 78 c2x4iA_ not modelled 13.9 16 PDB header:unknown function Chain: A: PDB Molecule:uncharacterized protein 114; PDBTitle: orf 114a from sulfolobus islandicus rudivirus 1 79 d2cvoa1 not modelled 13.8 11 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 80 c3nwiC_ not modelled 13.3 12 PDB header:transport protein Chain: C: PDB Molecule:zinc transport protein zntb; PDBTitle: the soluble domain structure of the zntb zn2+ efflux system 81 d1qlma_ not modelled 13.2 8 Fold:Methenyltetrahydromethanopterin cyclohydrolase Superfamily:Methenyltetrahydromethanopterin cyclohydrolase Family:Methenyltetrahydromethanopterin cyclohydrolase 82 c3t76A_ not modelled 13.2 16 PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator vanug; PDBTitle: crystal structure of transcriptional regulator vanug, form ii 83 d2dt5a1 not modelled 13.1 20 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Transcriptional repressor Rex, N-terminal domain 84 c1t4bB_ not modelled 12.9 0 PDB header:oxidoreductase Chain: B: PDB Molecule:aspartate-semialdehyde dehydrogenase; PDBTitle: 1.6 angstrom structure of esherichia coli aspartate-2 semialdehyde dehydrogenase. 85 d2p84a1 not modelled 12.6 33 Fold:YopX-like Superfamily:YopX-like Family:YopX-like 86 d2hjja1 not modelled 12.2 33 Fold:dsRBD-like Superfamily:YcfA/nrd intein domain Family:YkfF-like 87 c2hjjA_ not modelled 12.2 33 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein ykff; PDBTitle: solution nmr structure of protein ykff from escherichia coli.2 northeast structural genomics target er397. 88 c3ofeB_ not modelled 12.1 11 PDB header:chaperone Chain: B: PDB Molecule:ldlr chaperone boca; PDBTitle: structured domain of drosophila melanogaster boca p41 2 2 crystal form 89 c1jegB_ not modelled 12.1 67 PDB header:transferase/hydrolase Chain: B: PDB Molecule:hematopoietic cell protein-tyrosine phosphatase PDBTitle: solution structure of the sh3 domain from c-terminal src2 kinase complexed with a peptide from the tyrosine3 phosphatase pep 90 d1xrsb2 not modelled 12.0 44 Fold:Dodecin subunit-like Superfamily:D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain Family:D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain 91 c2gz3D_ not modelled 11.8 0 PDB header:oxidoreductase Chain: D: PDB Molecule:aspartate beta-semialdehyde dehydrogenase; PDBTitle: structure of aspartate semialdehyde dehydrogenase (asadh) from2 streptococcus pneumoniae complexed with nadp and aspartate-3 semialdehyde 92 c2qyzA_ not modelled 11.6 36 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of the uncharacterized protein ctc02137 from2 clostridium tetani e88 93 d1up7a2 not modelled 11.5 10 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:AglA-like glucosidase 94 d1s6ya2 not modelled 11.5 38 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:AglA-like glucosidase 95 c3uw3A_ not modelled 10.7 0 PDB header:oxidoreductase Chain: A: PDB Molecule:aspartate-semialdehyde dehydrogenase; PDBTitle: crystal structure of an aspartate-semialdehyde dehydrogenase from2 burkholderia thailandensis 96 c2wh7A_ not modelled 10.5 38 PDB header:hydrolase Chain: A: PDB Molecule:hyaluronidase-phage associated; PDBTitle: the partial structure of a group a streptpcoccal phage-2 encoded tail fibre hyaluronate lyase hylp2 97 c2i9sA_ not modelled 9.9 21 PDB header:chaperone Chain: A: PDB Molecule:mesoderm development candidate 2; PDBTitle: the solution structure of the core of mesoderm development2 (mesd). 98 c2w3pB_ not modelled 9.6 36 PDB header:lyase Chain: B: PDB Molecule:benzoyl-coa-dihydrodiol lyase; PDBTitle: boxc crystal structure 99 c3gwdA_ not modelled 9.3 44 PDB header:oxidoreductase Chain: A: PDB Molecule:cyclohexanone monooxygenase; PDBTitle: closed crystal structure of cyclohexanone monooxygenase