Email l.a.kelley@imperial.ac.uk Description P32668 Date Thu Jan 5 11:49:57 GMT 2012 Unique Job ID 85814f8ccb6b5781

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2k1gA_ 96.6 26 PDB header:lipoprotein Chain: A: PDB Molecule:lipoprotein spr; PDBTitle: solution nmr structure of lipoprotein spr from escherichia coli k12.2 northeast structural genomics target er541-37-162 2 d2evra2 95.4 22 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:NlpC/P60 3 c3pbiA_ 95.3 20 PDB header:hydrolase Chain: A: PDB Molecule:invasion protein; PDBTitle: structure of the peptidoglycan hydrolase ripb (rv1478) from2 mycobacterium tuberculosis at 1.6 resolution 4 c3gt2A_ 95.0 15 PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of the p60 domain from m. avium2 paratuberculosis antigen map1272c 5 c3npfB_ 94.6 21 PDB header:hydrolase Chain: B: PDB Molecule:putative dipeptidyl-peptidase vi; PDBTitle: crystal structure of a putative dipeptidyl-peptidase vi (bacova_00612)2 from bacteroides ovatus at 1.72 a resolution 6 c3i86A_ 94.2 18 PDB header:hydrolase Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of the p60 domain from m. avium subspecies2 paratuberculosis antigen map1204 7 c2xivA_ 93.6 25 PDB header:structural protein Chain: A: PDB Molecule:hypothetical invasion protein; PDBTitle: structure of rv1477, hypothetical invasion protein of2 mycobacterium tuberculosis 8 c3h41A_ 93.5 14 PDB header:hydrolase Chain: A: PDB Molecule:nlp/p60 family protein; PDBTitle: crystal structure of a nlpc/p60 family protein (bce_2878) from2 bacillus cereus atcc 10987 at 1.79 a resolution 9 c2fg0B_ 91.6 24 PDB header:hydrolase Chain: B: PDB Molecule:cog0791: cell wall-associated hydrolases (invasion- PDBTitle: crystal structure of a putative gamma-d-glutamyl-l-diamino acid2 endopeptidase (npun_r0659) from nostoc punctiforme pcc 73102 at 1.793 a resolution 10 d2if6a1 85.6 17 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:YiiX-like 11 c2p1gA_ 83.6 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative xylanase; PDBTitle: crystal structure of a putative xylanase from bacteroides fragilis 12 d2io8a2 70.5 13 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:CHAP domain 13 c3kw0D_ 69.4 19 PDB header:hydrolase Chain: D: PDB Molecule:cysteine peptidase; PDBTitle: crystal structure of cysteine peptidase (np_982244.1) from bacillus2 cereus atcc 10987 at 2.50 a resolution 14 c2vpmB_ 63.3 14 PDB header:ligase Chain: B: PDB Molecule:trypanothione synthetase; PDBTitle: trypanothione synthetase 15 c2k3aA_ 57.9 28 PDB header:hydrolase Chain: A: PDB Molecule:chap domain protein; PDBTitle: nmr solution structure of staphylococcus saprophyticus chap2 (cysteine, histidine-dependent amidohydrolases/peptidases)3 domain protein. northeast structural genomics consortium4 target syr11 16 c3obcB_ 57.2 27 PDB header:hydrolase Chain: B: PDB Molecule:pyrophosphatase; PDBTitle: crystal structure of a pyrophosphatase (af1178) from archaeoglobus2 fulgidus at 1.80 a resolution 17 c3m1uB_ 55.9 24 PDB header:hydrolase Chain: B: PDB Molecule:putative gamma-d-glutamyl-l-diamino acid endopeptidase; PDBTitle: crystal structure of a putative gamma-d-glutamyl-l-diamino acid2 endopeptidase (dvu_0896) from desulfovibrio vulgaris hildenborough at3 1.75 a resolution 18 c2ioaA_ 53.7 18 PDB header:ligase, hydrolase Chain: A: PDB Molecule:bifunctional glutathionylspermidine PDBTitle: e. coli bifunctional glutathionylspermidine2 synthetase/amidase incomplex with mg2+ and adp and3 phosphinate inhibitor 19 c3isrB_ 53.3 15 PDB header:hydrolase Chain: B: PDB Molecule:transglutaminase-like enzymes, putative cysteine protease; PDBTitle: the crystal structure of a putative cysteine protease from cytophaga2 hutchinsonii to 1.9a 20 c1rqgA_ 53.3 29 PDB header:ligase Chain: A: PDB Molecule:methionyl-trna synthetase; PDBTitle: methionyl-trna synthetase from pyrococcus abyssi 21 d2a3qa1 not modelled 49.5 34 Fold:all-alpha NTP pyrophosphatases Superfamily:all-alpha NTP pyrophosphatases Family:MazG-like 22 c2q4pA_ not modelled 49.5 34 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:protein rs21-c6; PDBTitle: ensemble refinement of the crystal structure of protein from mus2 musculus mm.29898 23 d1nx4a_ not modelled 46.5 22 Fold:Double-stranded beta-helix Superfamily:Clavaminate synthase-like Family:gamma-Butyrobetaine hydroxylase 24 d1bqka_ not modelled 42.5 13 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 25 c3r1jB_ not modelled 40.9 33 PDB header:oxidoreductase Chain: B: PDB Molecule:alpha-ketoglutarate-dependent taurine dioxygenase; PDBTitle: crystal structure of alpha-ketoglutarate-dependent taurine dioxygenase2 from mycobacterium avium, native form 26 d1otja_ not modelled 40.9 44 Fold:Double-stranded beta-helix Superfamily:Clavaminate synthase-like Family:TauD/TfdA-like 27 c3pvjB_ not modelled 38.9 33 PDB header:oxidoreductase Chain: B: PDB Molecule:alpha-ketoglutarate-dependent taurine dioxygenase; PDBTitle: crystal structure of the fe(ii)/alpha-ketoglutarate dependent taurine2 dioxygenase from pseudomonas putida kt2440 28 c2kytA_ not modelled 38.0 16 PDB header:hydrolase Chain: A: PDB Molecule:group xvi phospholipase a2; PDBTitle: solution struture of the h-rev107 n-terminal domain 29 c3eatX_ not modelled 36.2 22 PDB header:oxidoreductase Chain: X: PDB Molecule:pyoverdine biosynthesis protein pvcb; PDBTitle: crystal structure of the pvcb (pa2255) protein from2 pseudomonas aeruginosa 30 d1y0za_ not modelled 35.3 33 Fold:Double-stranded beta-helix Superfamily:Clavaminate synthase-like Family:gamma-Butyrobetaine hydroxylase 31 d1oiha_ not modelled 35.2 44 Fold:Double-stranded beta-helix Superfamily:Clavaminate synthase-like Family:TauD/TfdA-like 32 d1pmya_ not modelled 34.9 17 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 33 d1ilea3 not modelled 33.6 11 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Nucleotidylyl transferase Family:Class I aminoacyl-tRNA synthetases (RS), catalytic domain 34 d1plaa_ not modelled 32.6 16 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 35 c2x1lC_ not modelled 32.3 30 PDB header:ligase Chain: C: PDB Molecule:methionyl-trna synthetase; PDBTitle: crystal structure of mycobacterium smegmatis methionyl-trna2 synthetase in complex with methionine and adenosine 36 c2ct8A_ not modelled 32.1 26 PDB header:ligase/rna Chain: A: PDB Molecule:methionyl-trna synthetase; PDBTitle: crystal structure of aquifex aeolicus methionyl-trna2 synthetase complexed with trna(met) and methionyl-adenylate3 anologue 37 d2d5ba2 not modelled 31.6 22 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Nucleotidylyl transferase Family:Class I aminoacyl-tRNA synthetases (RS), catalytic domain 38 d1pfva2 not modelled 31.4 30 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Nucleotidylyl transferase Family:Class I aminoacyl-tRNA synthetases (RS), catalytic domain 39 d1kdja_ not modelled 31.0 31 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 40 d1rqga2 not modelled 30.7 31 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Nucleotidylyl transferase Family:Class I aminoacyl-tRNA synthetases (RS), catalytic domain 41 c3kflA_ not modelled 25.2 22 PDB header:ligase Chain: A: PDB Molecule:methionyl-trna synthetase; PDBTitle: leishmania major methionyl-trna synthetase in complex with2 methionyladenylate and pyrophosphate 42 d2jxma1 not modelled 24.4 19 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 43 c2zouB_ not modelled 24.4 15 PDB header:cell adhesion Chain: B: PDB Molecule:spondin-1; PDBTitle: crystal struture of human f-spondin reeler domain (fragment 2) 44 d1pcsa_ not modelled 23.5 21 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 45 d1wspa1 not modelled 23.0 24 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:DIX domain 46 d7pcya_ not modelled 22.4 25 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 47 d1bvp12 not modelled 21.4 45 Fold:Viral protein domain Superfamily:Viral protein domain Family:Top domain of virus capsid protein 48 d9pcya_ not modelled 20.8 19 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 49 d1ahsa_ not modelled 20.5 26 Fold:Viral protein domain Superfamily:Viral protein domain Family:Top domain of virus capsid protein 50 d1h3na3 not modelled 20.3 31 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Nucleotidylyl transferase Family:Class I aminoacyl-tRNA synthetases (RS), catalytic domain 51 d1mgta2 not modelled 19.7 23 Fold:Ribonuclease H-like motif Superfamily:Methylated DNA-protein cysteine methyltransferase domain Family:Methylated DNA-protein cysteine methyltransferase domain 52 d1bypa_ not modelled 19.2 19 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 53 d1paza_ not modelled 18.6 18 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 54 c1pfuA_ not modelled 18.1 30 PDB header:ligase Chain: A: PDB Molecule:methionyl-trna synthetase; PDBTitle: methionyl-trna synthetase from escherichia coli complexed2 with methionine phosphinate 55 d2etna2 not modelled 17.9 29 Fold:FKBP-like Superfamily:FKBP-like Family:GreA transcript cleavage factor, C-terminal domain 56 d1ag6a_ not modelled 17.9 19 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 57 d2oiea1 not modelled 17.5 38 Fold:all-alpha NTP pyrophosphatases Superfamily:all-alpha NTP pyrophosphatases Family:MazG-like 58 c1woyA_ not modelled 16.5 22 PDB header:ligase Chain: A: PDB Molecule:methionyl-trna synthetase; PDBTitle: crystal structure of methionyl trna synthetase y225f mutant2 from thermus thermophilus 59 c2im9A_ not modelled 16.2 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of protein lpg0564 from legionella pneumophila str.2 philadelphia 1, pfam duf1460 60 d2im9a1 not modelled 16.2 13 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Lpg0564-like 61 c2x35A_ not modelled 15.8 20 PDB header:transcription Chain: A: PDB Molecule:peregrin; PDBTitle: molecular basis of histone h3k36me3 recognition by the pwwp2 domain of brpf1. 62 d1plca_ not modelled 15.8 19 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 63 d1ivsa4 not modelled 15.3 17 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Nucleotidylyl transferase Family:Class I aminoacyl-tRNA synthetases (RS), catalytic domain 64 d2nlua1 not modelled 15.1 14 Fold:SH3-like barrel Superfamily:Tudor/PWWP/MBT Family:PWWP domain 65 d2f23a2 not modelled 15.1 29 Fold:FKBP-like Superfamily:FKBP-like Family:GreA transcript cleavage factor, C-terminal domain 66 d1h3za_ not modelled 15.0 15 Fold:SH3-like barrel Superfamily:Tudor/PWWP/MBT Family:PWWP domain 67 c2wbqA_ not modelled 14.6 20 PDB header:oxidoreductase Chain: A: PDB Molecule:l-arginine beta-hydroxylase; PDBTitle: crystal structure of vioc in complex with (2s,3s)-2 hydroxyarginine 68 d1xcca_ not modelled 14.5 19 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 69 c2og5A_ not modelled 14.3 11 PDB header:oxidoreductase Chain: A: PDB Molecule:putative oxygenase; PDBTitle: crystal structure of asparagine oxygenase (asno) 70 c2etnA_ not modelled 14.2 29 PDB header:transcription Chain: A: PDB Molecule:anti-cleavage anti-grea transcription factor PDBTitle: crystal structure of thermus aquaticus gfh1 71 d1iuza_ not modelled 13.9 17 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 72 c3ms5A_ not modelled 13.9 22 PDB header:oxidoreductase Chain: A: PDB Molecule:gamma-butyrobetaine dioxygenase; PDBTitle: crystal structure of human gamma-butyrobetaine,2-oxoglutarate2 dioxygenase 1 (bbox1) 73 c3lyiA_ not modelled 13.9 9 PDB header:transcription Chain: A: PDB Molecule:bromodomain-containing protein 1; PDBTitle: pwwp domain of human bromodomain-containing protein 1 74 c3o82B_ not modelled 13.8 14 PDB header:ligase Chain: B: PDB Molecule:peptide arylation enzyme; PDBTitle: structure of base n-terminal domain from acinetobacter baumannii bound2 to 5'-o-[n-(2,3-dihydroxybenzoyl)sulfamoyl] adenosine 75 c2l8kA_ not modelled 13.0 35 PDB header:viral protein Chain: A: PDB Molecule:non-structural protein 7; PDBTitle: nmr structure of the arterivirus nonstructural protein 7 alpha (nsp72 alpha) 76 c2v2gC_ not modelled 12.9 26 PDB header:oxidoreductase Chain: C: PDB Molecule:peroxiredoxin 6; PDBTitle: crystal structure of the c45s mutant of the peroxiredoxin 62 of arenicola marina. monoclinic form 77 d1te7a_ not modelled 12.8 31 Fold:PUA domain-like Superfamily:PUA domain-like Family:yqfB-like 78 c3pfsA_ not modelled 12.6 9 PDB header:protein binding Chain: A: PDB Molecule:bromodomain and phd finger-containing protein 3; PDBTitle: pwwp domain of human bromodomain and phd finger-containing protein 3 79 c2q9lA_ not modelled 12.4 22 PDB header:hydrolase Chain: A: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of imazg from vibrio dat 722: ctag-imazg (p43212) 80 d1ds1a_ not modelled 12.3 22 Fold:Double-stranded beta-helix Superfamily:Clavaminate synthase-like Family:Clavaminate synthase 81 d1ffya3 not modelled 12.2 18 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Nucleotidylyl transferase Family:Class I aminoacyl-tRNA synthetases (RS), catalytic domain 82 c2l3oA_ not modelled 11.7 33 PDB header:cytokine Chain: A: PDB Molecule:interleukin 3; PDBTitle: solution structure of murine interleukin 3 83 c1u0bB_ not modelled 11.6 28 PDB header:ligase/rna Chain: B: PDB Molecule:cysteinyl trna; PDBTitle: crystal structure of cysteinyl-trna synthetase binary2 complex with trnacys 84 c2wkdA_ not modelled 11.5 57 PDB header:dna binding protein Chain: A: PDB Molecule:orf34p2; PDBTitle: crystal structure of a double ile-to-met mutant of protein2 orf34 from lactococcus phage p2 85 d2q5ba1 not modelled 11.5 31 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 86 d1em8a_ not modelled 11.0 25 Fold:DNA polymerase III chi subunit Superfamily:DNA polymerase III chi subunit Family:DNA polymerase III chi subunit 87 c2l53B_ not modelled 11.0 38 PDB header:ca-binding protein/proton transport Chain: B: PDB Molecule:voltage-gated sodium channel type v alpha isoform b PDBTitle: solution nmr structure of apo-calmodulin in complex with the iq motif2 of human cardiac sodium channel nav1.5 88 c2p4vA_ not modelled 10.6 24 PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor greb; PDBTitle: crystal structure of the transcript cleavage factor, greb2 at 2.6a resolution 89 c3exmA_ not modelled 10.1 29 PDB header:hydrolase Chain: A: PDB Molecule:phosphatase sc4828; PDBTitle: crystal structure of the phosphatase sc4828 with the non-hydrolyzable2 nucleotide gpcp 90 c3ca8B_ not modelled 9.6 25 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:protein ydcf; PDBTitle: crystal structure of escherichia coli ydcf, an s-adenosyl-l-methionine2 utilizing enzyme 91 d2cj3a1 not modelled 9.0 18 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like 92 d1qcsa1 not modelled 8.7 30 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Cdc48 N-terminal domain-like 93 d1prxa_ not modelled 8.5 26 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 94 c2kxwB_ not modelled 8.3 33 PDB header:calcium-binding protein/metal transport Chain: B: PDB Molecule:sodium channel protein type 2 subunit alpha; PDBTitle: structure of the c-domain fragment of apo calmodulin bound to the iq2 motif of nav1.2 95 d1li5a2 not modelled 8.2 31 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Nucleotidylyl transferase Family:Class I aminoacyl-tRNA synthetases (RS), catalytic domain 96 c1obhA_ not modelled 8.1 31 PDB header:synthetase Chain: A: PDB Molecule:leucyl-trna synthetase; PDBTitle: leucyl-trna synthetase from thermus thermophilus complexed2 with a pre-transfer editing substrate analogue in both3 synthetic active site and editing site 97 c2rfpA_ not modelled 8.1 18 PDB header:hydrolase Chain: A: PDB Molecule:putative ntp pyrophosphohydrolase; PDBTitle: crystal structure of putative ntp pyrophosphohydrolase2 (yp_001813558.1) from exiguobacterium sibiricum 255-15 at 1.74 a3 resolution 98 c1ileA_ not modelled 8.1 11 PDB header:aminoacyl-trna synthetase Chain: A: PDB Molecule:isoleucyl-trna synthetase; PDBTitle: isoleucyl-trna synthetase 99 d1bxua_ not modelled 7.9 44 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like