Fold library entry viewer: c2ioaA_

Added to library: Tue Mar 16 12:16:42 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	P	F	G	T	L	L	G	Y	A	P	G	G	V	A	I	Y	S	S	D	Y	V	F	R	S	Y	I	D	D	E	Y	M	G	H	K	W	Q	C	V	E	F	A	R	R	F	L	F	L	N	Y	G	V	V	F	T	D	V	G	M	A	W	E	I	F	S	L	R	F	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T							G	G	G															T	T						T	T															S							S	S	G	G	G	G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	V	V	N	D	N	I	L	P	L	Q	A	F	P	N	G	S	P	R	A	P	V	A	G	A	L	L	I	W	D	K	G	G	E	F	K	D	T	G	H	V	A	I	I	T	Q	L	H	G	N	K	V	R	I	A	E	Q	N	V	I	H	S	P	L	P	Q	G	Q	Q	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T	T										T	T	B	S	S				T	T							S	B	T	T	B	T	T	T											S	S							S	S	S			S				T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	R	E	L	E	M	V	V	E	N	G	C	Y	T	L	K	D	T	F	D	D	T	T	I	L	G	W	M	I	Q	T	E	D	T	E	Y	S	L	P	Q	P	E	I	A	G	E	L	L	K	I	S	G	A	R	L	E	N	K	G	Q	F	D	G	K	W	L	D	E	K	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S								S	S	S							S	S	T	T											S			T	T									G	G	G	G										S	S	T	T	S	S			S		S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	P	L	Q	N	A	Y	V	Q	A	N	G	Q	V	I	N	Q	D	P	Y	H	Y	Y	T	I	T	E	S	A	E	Q	E	L	I	K	A	T	N	E	L	H	L	M	Y	L	H	A	T	D	K	V	L	K	D	D	N	L	L	A	L	F	D	I	P	K	I	L	W	P	R	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S		S	S	S		T	T																																	T						G	G	G				G	G	G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	R	L	S	W	Q	R	R	R	H	H	M	I	T	G	R	M	D	F	C	M	D	E	R	G	L	K	V	Y	E	Y	N	A	D	S	A	S	C	H	T	E	A	G	L	I	L	E	R	W	A	E	Q	G	Y	K	G	N	G	F	N	P	A	E	G	L	I	N	E	L	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T													T	T										S	S									T												S	S		B		T	T	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	A	W	K	H	S	R	A	R	P	F	V	H	I	M	Q	D	K	D	I	E	E	N	Y	H	A	Q	F	M	E	Q	A	L	H	Q	A	G	F	E	T	R	I	L	R	G	L	D	E	L	G	W	Q	L	I	D	G	E	G	R	L	V	N	C	V	W	K	T	W	A	W	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	S				S								S																		T	T								S	S	T	T		B				B		T	T	S		B								S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	T	A	F	D	Q	I	R	E	V	F	A	A	V	P	I	R	T	G	H	P	Q	N	E	V	R	L	I	D	V	L	L	R	P	E	V	L	V	F	E	P	L	W	T	V	I	P	G	N	K	A	I	L	P	I	L	W	S	L	F	P	H	H	R	Y	L	L	D	T	D	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S					S			T	T					S					T	S	T	T					S		G	G	G	G	T	T	T	S	G	G	G								S	T	T		T	T						S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	T	V	N	D	E	L	V	K	T	G	Y	A	V	K	P	I	A	G	R	C	G	S	N	I	D	L	V	S	H	H	E	E	V	L	D	K	T	S	G	K	F	A	E	Q	K	N	I	Y	Q	Q	L	W	C	L	P	K	V	D	G	K	Y	I	Q	V	C	T	F	T	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S															T	T			T	T		S						T	T	S									T	T	T	T	S														T	T											T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.
Sequence	G	N	Y	G	G	T	C	L	R	G	D	E	S	L	V	I	K	K	E	S	D	I	E	P	L	I	V	V	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T											S	S	S	S			T	T

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PDB structure

FASTA sequence

Hidden Markov model

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