Fold library entry viewer: c1ileA_

Added to library: Tue Mar 16 13:15:48 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	F	K	E	V	G	E	P	N	F	P	K	L	E	E	E	V	L	A	F	W	K	R	E	K	I	F	Q	K	S	V	E	N	R	K	G	G	P	R	Y	T	V	Y	E	G	P	P	T	A	N	G	L	P	H	V	G	H	A	Q	A	R	S	Y	K	D	L	F	P	R	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								T	T									T	T	T	S		B			B							T	T	S				T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	T	M	R	G	Y	Y	A	P	R	R	A	G	W	D	T	H	G	L	P	V	E	L	E	V	E	K	K	L	G	L	K	S	K	R	E	I	E	A	Y	G	I	E	R	F	N	Q	A	C	R	E	S	V	F	T	Y	E	K	E	W	E	A	F	T	E	R	I	A	Y	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T		B																						T	T			S																				T	T	T	T					T	T					T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	D	L	E	D	A	Y	A	T	L	E	P	T	Y	I	E	S	I	W	W	S	L	K	N	L	F	D	R	G	L	L	Y	R	D	H	K	V	V	P	Y	C	P	R	C	G	T	P	L	S	S	H	E	V	A	L	G	Y	K	E	I	Q	D	P	S	V	Y	V	R	F	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	S																	T	T													T	T	T	T											T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	K	E	P	K	K	L	G	L	E	K	A	S	L	L	I	W	T	T	T	P	W	T	L	P	G	N	V	A	A	A	V	H	P	E	Y	T	Y	A	A	F	Q	V	G	D	E	A	L	I	L	E	E	G	L	G	R	K	L	L	G	E	G	T	Q	V	L	K	T	F	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B	S	S	G	G	G	G	T		S	S								S		G	G	G	G	G	G								T	T	S								T	T							T	T						T		T	T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	G	K	A	L	E	G	L	P	Y	T	P	P	Y	P	Q	A	L	E	K	G	Y	F	V	V	L	A	D	Y	V	S	Q	E	D	G	T	G	I	V	H	Q	A	P	A	F	G	A	E	D	L	E	T	A	R	V	Y	G	L	P	L	L	K	T	V	D	E	E	G	K	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T		B	B			S	S					S	S		S	B					T	T			S	S	S	S		S						T	T	S											T	T							B		T	T	S	B	B
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	V	E	P	F	K	G	L	Y	F	R	E	A	N	R	A	I	L	R	D	L	R	G	R	G	L	L	F	K	E	E	S	Y	L	H	S	Y	P	H	C	W	R	C	S	T	P	L	M	Y	Y	A	T	E	S	W	F	I	K	N	T	L	F	K	D	E	L	I	R	N	N	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	G	G	G	T	T		B															T	T														B		S	S	S			B													G	G	G	G
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	E	I	H	W	V	P	P	H	I	K	E	G	R	Y	G	E	W	L	K	N	L	V	D	W	A	L	S	R	N	R	Y	W	G	T	P	L	P	I	W	V	C	Q	A	C	G	K	E	E	A	I	G	S	F	Q	E	L	K	A	R	A	T	K	P	L	P	E	P	F	D	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S			S	S	G	G	G	T	T	T	T	T						T								B			S	S	S		B							S	S	S	S							S								B	S	S				S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	H	R	P	Y	V	D	Q	V	E	L	A	C	A	C	G	G	T	M	R	R	V	P	Y	V	I	D	V	W	Y	D	S	G	A	M	P	F	A	S	L	H	Y	P	F	E	H	E	E	V	F	R	E	S	F	P	A	D	F	I	A	E	G	I	D	Q	T	R	G	W	F	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S					T	T						T	T	S	S						S		B														T	T	T	T	T	T	S									S	S	B	S	B					G	G	G	G	G	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	S	L	H	Q	L	G	V	M	L	F	G	S	I	A	F	K	N	V	I	C	H	G	L	I	L	D	E	K	G	Q	K	M	S	K	S	K	G	N	V	V	D	P	W	D	I	I	R	K	F	G	A	D	A	L	R	W	Y	I	Y	V	S	A	P	P	E	A	D	R	R	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S		S	B	S											T	T	S	S				T	T	T	T										T	T	T													S		S	S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	G	P	N	L	V	R	E	T	V	R	D	Y	F	L	T	L	W	N	V	Y	S	F	F	V	T	Y	A	N	L	D	R	P	D	L	K	N	P	P	P	P	E	K	R	P	E	M	D	R	W	L	L	A	R	M	Q	D	L	I	Q	R	V	T	E	A	L	E	A	Y	D	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T																						T	T	S				S	T	T	S																								T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	T	T	S	A	R	A	L	R	D	F	V	V	E	D	L	S	Q	W	Y	V	R	R	N	R	R	R	F	W	K	N	E	D	A	L	D	R	E	A	A	Y	A	T	L	Y	E	A	L	V	L	V	A	T	L	A	A	P	F	T	P	F	L	A	E	V	L	W	Q	N	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S	S	T	T	T										T		T	T	T	S	S	T	T																		T	T	T	S	T	T										T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.
Sequence	R	S	V	R	L	E	A	K	E	S	V	H	L	A	D	W	P	E	A	D	P	A	L	A	D	E	A	L	V	A	Q	M	R	A	V	L	K	V	V	D	L	A	R	A	A	R	A	K	S	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	S	T	T	S		S	S	G	G	G	S							T	T	T																				T	T		T	T	S

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PDB structure

FASTA sequence

Hidden Markov model

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