Fold library entry viewer: c2vpmB_

Added to library: Tue Mar 16 11:56:36 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	H	M	S	S	L	Q	R	A	S	V	S	F	N	K	P	G	H	I	P	F	G	A	V	Q	G	Y	A	P	G	G	V	P	A	Y	S	N	K	H	D	H	Y	F	S	G	E	R	N	I	E	D	N	I	F	F	G	F	K	Y	Q	C	V	E	F	A	R	R	W	L	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S		S	S					S	S		T	T				T	T							T	T	T							S	S	T	T										T	T						T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	K	G	L	L	L	P	D	V	N	W	A	C	H	I	F	Q	L	K	E	V	R	D	A	A	T	T	E	S	F	A	V	L	Q	V	R	N	G	T	T	T	K	P	E	A	D	A	L	L	V	Y	P	S	T	D	A	N	P	V	G	H	V	G	T	I	T	E	V	G	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S							S	S	G	G	G	G	G	G							T	T	T											S	S	B	S					S	S								B	T	T	B	T	T											S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	Y	V	C	V	A	D	Q	N	Y	R	F	H	K	W	E	S	S	C	A	Y	K	L	K	L	D	H	R	D	G	I	W	T	I	I	D	D	I	D	A	D	E	I	E	I	P	L	G	W	L	T	F	P	G	R	A	N	R	P	E	G	A	P	P	V	A	L	H	P	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S							S	S	S			S			S	S	S	S	S									T	T						B		S	S	T	T	S		B									T	T						T	T								G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	H	F	K	E	P	P	K	P	Y	L	L	R	R	N	F	L	P	T	E	S	K	A	N	W	L	D	M	N	N	P	A	E	R	L	F	V	E	E	F	G	V	V	S	Y	Y	E	S	N	H	E	F	H	L	R	C	V	A	Y	G	T	Q	L	H	A	I	F	M	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	S																	S	S			S	S		S		T	T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	T	A	Q	V	I	E	S	D	E	K	L	R	L	F	A	I	P	E	E	F	W	P	R	I	R	H	S	W	K	Y	Q	Q	T	Y	I	S	G	R	F	D	F	A	F	N	N	E	T	G	E	V	K	C	F	E	Y	N	A	D	S	A	S	T	L	L	E	C	G	L	I	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T								T	T			G	G	G															S										T	T	T										T	T			T	T						T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	Q	K	W	A	E	S	V	G	L	D	K	Q	D	T	R	G	S	G	F	A	V	E	R	N	L	K	M	A	W	A	N	S	G	A	T	G	R	V	H	F	C	V	D	E	E	R	E	E	Q	Y	T	A	L	Y	C	M	Q	A	A	E	A	V	G	L	E	G	K	L	C	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T				T	T				G	G	G	G												S				S								S																	T	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	L	F	D	E	F	R	F	D	D	N	G	H	V	V	D	S	D	G	V	R	V	R	N	V	W	K	T	W	M	W	E	S	A	I	T	D	Y	Y	A	A	R	E	E	R	G	E	N	W	K	P	S	P	K	D	K	V	R	L	C	D	L	L	L	G	D	D	W	E	I	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T					T	T	S					T	T			B							S	S																		T	T					T	T	S	B								S	S	S		T	T	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	Y	F	E	P	M	W	K	V	I	P	S	N	K	A	I	L	P	M	I	Y	H	N	H	P	E	H	P	A	I	L	K	A	E	Y	E	L	T	D	E	L	R	K	H	G	Y	A	K	K	P	I	V	N	M	I	Y	Q	Q	L	F	E	L	K	K	Q	D	D	Y	Y	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S		G	G	G	G	T	T	T	S	G	G	G									T	T		T	T						S	S																													B	T	T	B
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.
Sequence	I	G	G	W	M	I	G	D	A	F	S	G	T	G	I	R	E	D	K	S	V	I	T	G	V	D	S	P	F	A	A	V	R	I	K	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T											S	S				G	G	G	S

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PDB structure

FASTA sequence

Hidden Markov model

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