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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3m1uB_

Fold library idPDB HeaderMoleculeTitle
c3m1uB_PDB header: hydrolaseChain: B: PDB Molecule: putative gamma-d-glutamyl-l-diamino acidPDBTitle: crystal structure of a putative gamma-d-glutamyl-l-diamino2 acid endopeptidase (dvu_0896) from desulfovibrio vulgaris3 hildenborough at 1.75 a resolution


Added to library: Sat Aug 28 21:14:12 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PSREGHVADLDRFPQDLRVYAXKAGADRQLLPFTEQAAQDARWNRRFFAPWRXTRISVPVKDVAAPFGTD
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Known secondary structure (DSSP)

STT

TS
S

TT

SS
GGGG
SS

S
GGG
GG
 .........80.........90.........100.........110.........120.........130.........140
Sequence GRPRGYAENLLPWDVTRWGALASGAALDLYPSQAWKGIVVSNSALREVPTLRPXFTAPTRAGQGYPFDXF
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Known secondary structure (DSSP) G


SB
TTSSB

T
GGG
S



S
SSS
SS

BS
TTSTTSSTT

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence QRTAVWXGTPVFVGHATADRAWLYVETAFAAGWXPAADVARVDDAFXTRYESGSLAAILRDDTSLNGADG
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Known secondary structure (DSSP)
TT

TTSS
SS
GGG

SS

STT
TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence THLATAHIGTVLPLSGASQVGRTVLVPVRAPEGHAVVVPVLLTSGEAAQKPVPLTPGNXAELGNRXXGQP
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Known secondary structure (DSSP)

TT

SS
TTSBTTTSS



TT
B
 .........290.........300.........310.........320.........330.........340.........350
Sequence YGWGGLYEDRDCSSTLRDLFTPFGLWLPRNSASQAKAGRYVDIAKLDADDKEARIVAEGVPFXTLLWLRG
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Known secondary structure (DSSP) B
GGGGGG
B
GGGT



SSTTSS
TTS


TTSTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence HITLYLGLHEGQAAXFHNXWGIRTHRGGVEGRYVLGRAVVTSTRPGLDVPGNDNADGLLGRXQGXSILPG
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Known secondary structure (DSSP) TTTT
S
TTTTSTTBS
TTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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