Email l.a.kelley@imperial.ac.uk Description P46122 Date Thu Jan 5 12:04:02 GMT 2012 Unique Job ID 84c2121673d58d0a

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2jwyA_ 100.0 100 PDB header:lipoprotein Chain: A: PDB Molecule:uncharacterized lipoprotein yaji; PDBTitle: solution nmr structure of uncharacterized lipoprotein yaji from2 escherichia coli. northeast structural genomics target er540 2 c1kddC_ 83.8 29 PDB header:de novo protein Chain: C: PDB Molecule:gcn4 acid base heterodimer acid-d12la16i; PDBTitle: x-ray structure of the coiled coil gcn4 acid base2 heterodimer acid-d12la16i base-d12la16l 3 c1kddF_ 83.6 29 PDB header:de novo protein Chain: F: PDB Molecule:gcn4 acid base heterodimer acid-d12la16i; PDBTitle: x-ray structure of the coiled coil gcn4 acid base2 heterodimer acid-d12la16i base-d12la16l 4 c1kddA_ 83.6 29 PDB header:de novo protein Chain: A: PDB Molecule:gcn4 acid base heterodimer acid-d12la16i; PDBTitle: x-ray structure of the coiled coil gcn4 acid base2 heterodimer acid-d12la16i base-d12la16l 5 c1kd9A_ 83.3 29 PDB header:de novo protein Chain: A: PDB Molecule:gcn4 acid base heterodimer acid-d12la16l; PDBTitle: x-ray structure of the coiled coil gcn4 acid base2 heterodimer acid-d12la16l base-d12la16l 6 c1kd9C_ 83.3 29 PDB header:de novo protein Chain: C: PDB Molecule:gcn4 acid base heterodimer acid-d12la16l; PDBTitle: x-ray structure of the coiled coil gcn4 acid base2 heterodimer acid-d12la16l base-d12la16l 7 c1kd9F_ 83.3 29 PDB header:de novo protein Chain: F: PDB Molecule:gcn4 acid base heterodimer acid-d12la16l; PDBTitle: x-ray structure of the coiled coil gcn4 acid base2 heterodimer acid-d12la16l base-d12la16l 8 c1kd8F_ 69.2 26 PDB header:de novo protein Chain: F: PDB Molecule:gcn4 acid base heterodimer acid-d12ia16v; PDBTitle: x-ray structure of the coiled coil gcn4 acid base2 heterodimer acid-d12ia16v base-d12la16l 9 c1kd8C_ 69.2 26 PDB header:de novo protein Chain: C: PDB Molecule:gcn4 acid base heterodimer acid-d12ia16v; PDBTitle: x-ray structure of the coiled coil gcn4 acid base2 heterodimer acid-d12ia16v base-d12la16l 10 c1kd8A_ 67.8 26 PDB header:de novo protein Chain: A: PDB Molecule:gcn4 acid base heterodimer acid-d12ia16v; PDBTitle: x-ray structure of the coiled coil gcn4 acid base2 heterodimer acid-d12ia16v base-d12la16l 11 c2x7aB_ 66.1 20 PDB header:immune system Chain: B: PDB Molecule:bone marrow stromal antigen 2; PDBTitle: structural basis of hiv-1 tethering to membranes by the2 bst2-tetherin ectodomain 12 c3mkxC_ 56.6 20 PDB header:antiviral protein Chain: C: PDB Molecule:bone marrow stromal antigen 2; PDBTitle: crystal structure of bst2/tetherin 13 c2zzjA_ 52.2 19 PDB header:lyase Chain: A: PDB Molecule:glucuronan lyase a; PDBTitle: crystal structure of endo-beta-1,4-glucuronan lyase from2 fungus trichoderma reesei 14 c1dipA_ 42.9 24 PDB header:acetylation Chain: A: PDB Molecule:delta-sleep-inducing peptide immunoreactive PDBTitle: the solution structure of porcine delta-sleep-inducing2 peptide immunoreactive peptide, nmr, 10 structures 15 c1yycA_ 40.4 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative late embryogenesis abundant protein; PDBTitle: solution structure of a putative late embryogenesis2 abundant (lea) protein at2g46140.1 16 c2gr7C_ 38.0 19 PDB header:membrane protein Chain: C: PDB Molecule:adhesin; PDBTitle: hia 992-1098 17 d2gr7a1 38.0 19 Fold:Pili subunits Superfamily:Pili subunits Family:YadA C-terminal domain-like 18 c1u2uA_ 37.8 37 PDB header:transcription Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: nmr solution structure of a designed heterodimeric leucine2 zipper 19 c1kd8E_ 37.1 23 PDB header:de novo protein Chain: E: PDB Molecule:gcn4 acid base heterodimer base-d12la16l; PDBTitle: x-ray structure of the coiled coil gcn4 acid base2 heterodimer acid-d12ia16v base-d12la16l 20 c3bvhC_ 34.5 20 PDB header:blood clotting Chain: C: PDB Molecule:fibrinogen gamma chain; PDBTitle: crystal structure of recombinant gammad364a fibrinogen fragment d with2 the peptide ligand gly-pro-arg-pro-amide 21 c3bkpA_ not modelled 33.3 21 PDB header:isomerase Chain: A: PDB Molecule:cyclophilin; PDBTitle: crystal structure of the toxoplasma gondii cyclophilin, 49.m03261 22 c2yy0D_ not modelled 32.7 21 PDB header:transcription Chain: D: PDB Molecule:c-myc-binding protein; PDBTitle: crystal structure of ms0802, c-myc-1 binding protein domain2 from homo sapiens 23 d1xo8a_ not modelled 29.4 14 Fold:Immunoglobulin-like beta-sandwich Superfamily:LEA14-like Family:LEA14-like 24 c2hpcF_ not modelled 26.0 19 PDB header:blood clotting Chain: F: PDB Molecule:fibrinogen, gamma polypeptide; PDBTitle: crystal structure of fragment d from human fibrinogen complexed with2 gly-pro-arg-pro-amide. 25 d1r8ia_ not modelled 25.6 11 Fold:immunoglobulin/albumin-binding domain-like Superfamily:Typo IV secretion system protein TraC Family:Typo IV secretion system protein TraC 26 c1r8iA_ not modelled 25.6 11 PDB header:structural protein Chain: A: PDB Molecule:trac; PDBTitle: crystal structure of trac 27 c2vefB_ not modelled 24.9 33 PDB header:transferase Chain: B: PDB Molecule:dihydropteroate synthase; PDBTitle: dihydropteroate synthase from streptococcus pneumoniae 28 c1aq5C_ not modelled 24.6 11 PDB header:coiled-coil Chain: C: PDB Molecule:cartilage matrix protein; PDBTitle: high-resolution solution nmr structure of the trimeric coiled-coil2 domain of chicken cartilage matrix protein, 20 structures 29 d1o75a2 not modelled 24.5 14 Fold:Immunoglobulin-like beta-sandwich Superfamily:Tp47 lipoprotein, middle and C-terminal domains Family:Tp47 lipoprotein, middle and C-terminal domains 30 c3t97A_ not modelled 22.9 3 PDB header:protein transport Chain: A: PDB Molecule:nuclear pore glycoprotein p62; PDBTitle: molecular architecture of the transport channel of the nuclear pore2 complex: nup62/nup54 31 d1afwa2 not modelled 22.6 21 Fold:Thiolase-like Superfamily:Thiolase-like Family:Thiolase-related 32 c2xzrA_ not modelled 22.5 15 PDB header:cell adhesion Chain: A: PDB Molecule:immunoglobulin-binding protein eibd; PDBTitle: escherichia coli immunoglobulin-binding protein eibd 391-438 fused2 to gcn4 adaptors 33 c3iynR_ not modelled 20.1 10 PDB header:virus Chain: R: PDB Molecule:hexon-associated protein; PDBTitle: 3.6-angstrom cryoem structure of human adenovirus type 5 34 d1smoa_ not modelled 20.1 18 Fold:Immunoglobulin-like beta-sandwich Superfamily:Immunoglobulin Family:V set domains (antibody variable domain-like) 35 d1an2a_ not modelled 19.7 9 Fold:HLH-like Superfamily:HLH, helix-loop-helix DNA-binding domain Family:HLH, helix-loop-helix DNA-binding domain 36 c1xnaA_ not modelled 19.6 15 PDB header:dna binding protein Chain: A: PDB Molecule:protein (dna-repair protein xrcc1); PDBTitle: nmr solution structure of the single-strand break repair2 protein xrcc1-n-terminal domain 37 d1eqwa_ not modelled 19.2 25 Fold:Immunoglobulin-like beta-sandwich Superfamily:Cu,Zn superoxide dismutase-like Family:Cu,Zn superoxide dismutase-like 38 c2dzaA_ not modelled 19.1 25 PDB header:transferase Chain: A: PDB Molecule:dihydropteroate synthase; PDBTitle: crystal structure of dihydropteroate synthase from thermus2 thermophilus hb8 in complex with 4-aminobenzoate 39 d1eyea_ not modelled 19.0 33 Fold:TIM beta/alpha-barrel Superfamily:Dihydropteroate synthetase-like Family:Dihydropteroate synthetase 40 c1cz7C_ not modelled 18.4 19 PDB header:contractile protein Chain: C: PDB Molecule:microtubule motor protein ncd; PDBTitle: the crystal structure of a minus-end directed microtubule2 motor protein ncd reveals variable dimer conformations 41 c3aqqD_ not modelled 18.0 18 PDB header:dna binding protein Chain: D: PDB Molecule:calcium-regulated heat stable protein 1; PDBTitle: crystal structure of human crhsp-24 42 c1kzzA_ not modelled 17.7 7 PDB header:signaling protein Chain: A: PDB Molecule:tnf receptor associated factor 3; PDBTitle: downstream regulator tank binds to the cd40 recognition2 site on traf3 43 c2y5sA_ not modelled 17.5 33 PDB header:transferase Chain: A: PDB Molecule:dihydropteroate synthase; PDBTitle: crystal structure of burkholderia cenocepacia dihydropteroate2 synthase complexed with 7,8-dihydropteroate. 44 c2e43A_ not modelled 17.1 15 PDB header:transcription/dna Chain: A: PDB Molecule:ccaat/enhancer-binding protein beta; PDBTitle: crystal structure of c/ebpbeta bzip homodimer k269a mutant2 bound to a high affinity dna fragment 45 d1wu9a1 not modelled 16.9 14 Fold:EB1 dimerisation domain-like Superfamily:EB1 dimerisation domain-like Family:EB1 dimerisation domain-like 46 c2ibyD_ not modelled 16.9 5 PDB header:transferase Chain: D: PDB Molecule:acetyl-coa acetyltransferase; PDBTitle: crystallographic and kinetic studies of human mitochondrial2 acetoacetyl-coa thiolase (t2): the importance of potassium and3 chloride for its structure and function 47 c2bmbA_ not modelled 16.8 33 PDB header:transferase Chain: A: PDB Molecule:folic acid synthesis protein fol1; PDBTitle: x-ray structure of the bifunctional 6-hydroxymethyl-7,8-2 dihydroxypterin pyrophosphokinase dihydropteroate synthase3 from saccharomyces cerevisiae 48 c1coiA_ not modelled 16.2 19 PDB header:alpha-helical bundle Chain: A: PDB Molecule:coil-vald; PDBTitle: designed trimeric coiled coil-vald 49 c2xv5A_ not modelled 16.1 7 PDB header:structural protein Chain: A: PDB Molecule:lamin-a/c; PDBTitle: human lamin a coil 2b fragment 50 c1n73C_ not modelled 15.9 13 PDB header:blood clotting Chain: C: PDB Molecule:fibrin gamma chain; PDBTitle: fibrin d-dimer, lamprey complexed with the peptide ligand: gly-his-2 arg-pro-amide 51 c1deqF_ not modelled 15.5 16 PDB header: PDB COMPND: 52 d1e5ma2 not modelled 15.5 14 Fold:Thiolase-like Superfamily:Thiolase-like Family:Thiolase-related 53 c2vp8A_ not modelled 15.4 22 PDB header:transferase Chain: A: PDB Molecule:dihydropteroate synthase 2; PDBTitle: structure of mycobacterium tuberculosis rv1207 54 c3n4xB_ not modelled 15.3 14 PDB header:replication Chain: B: PDB Molecule:monopolin complex subunit csm1; PDBTitle: structure of csm1 full-length 55 c1deqO_ not modelled 14.9 13 PDB header: PDB COMPND: 56 d1esoa_ not modelled 14.7 30 Fold:Immunoglobulin-like beta-sandwich Superfamily:Cu,Zn superoxide dismutase-like Family:Cu,Zn superoxide dismutase-like 57 c1u0iA_ not modelled 14.5 20 PDB header:de novo protein Chain: A: PDB Molecule:iaal-e3; PDBTitle: iaal-e3/k3 heterodimer 58 d1v5ja_ not modelled 14.4 7 Fold:Immunoglobulin-like beta-sandwich Superfamily:Fibronectin type III Family:Fibronectin type III 59 d1ajza_ not modelled 14.4 25 Fold:TIM beta/alpha-barrel Superfamily:Dihydropteroate synthetase-like Family:Dihydropteroate synthetase 60 d1ad1a_ not modelled 14.4 25 Fold:TIM beta/alpha-barrel Superfamily:Dihydropteroate synthetase-like Family:Dihydropteroate synthetase 61 c3pp5A_ not modelled 14.1 21 PDB header:structural protein Chain: A: PDB Molecule:brk1; PDBTitle: high-resolution structure of the trimeric scar/wave complex precursor2 brk1 62 d1m3ka2 not modelled 13.9 20 Fold:Thiolase-like Superfamily:Thiolase-like Family:Thiolase-related 63 c3mcnA_ not modelled 13.7 43 PDB header:transferase Chain: A: PDB Molecule:2-amino-4-hydroxy-6-hydroxymethyldihydropteridine PDBTitle: crystal structure of the 6-hyroxymethyl-7,8-dihydropterin2 pyrophosphokinase dihydropteroate synthase bifunctional enzyme from3 francisella tularensis 64 c3ghgK_ not modelled 13.6 3 PDB header:blood clotting Chain: K: PDB Molecule:fibrinogen beta chain; PDBTitle: crystal structure of human fibrinogen 65 d2ix4a2 not modelled 13.6 29 Fold:Thiolase-like Superfamily:Thiolase-like Family:Thiolase-related 66 c1txqB_ not modelled 13.5 14 PDB header:structural protein/protein binding Chain: B: PDB Molecule:microtubule-associated protein rp/eb family PDBTitle: crystal structure of the eb1 c-terminal domain complexed2 with the cap-gly domain of p150glued 67 d1txqb1 not modelled 13.5 14 Fold:EB1 dimerisation domain-like Superfamily:EB1 dimerisation domain-like Family:EB1 dimerisation domain-like 68 c3lssA_ not modelled 13.4 18 PDB header:ligase Chain: A: PDB Molecule:seryl-trna synthetase; PDBTitle: trypanosoma brucei seryl-trna synthetase in complex with atp 69 d2gfva2 not modelled 13.3 43 Fold:Thiolase-like Superfamily:Thiolase-like Family:Thiolase-related 70 c1r48A_ not modelled 13.2 16 PDB header:transport protein Chain: A: PDB Molecule:proline/betaine transporter; PDBTitle: solution structure of the c-terminal cytoplasmic domain2 residues 468-497 of escherichia coli protein prop 71 d1ulqa2 not modelled 13.0 27 Fold:Thiolase-like Superfamily:Thiolase-like Family:Thiolase-related 72 d1k32a4 not modelled 12.9 31 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Tail specific protease, catalytic domain 73 c3p8cE_ not modelled 12.9 25 PDB header:protein binding Chain: E: PDB Molecule:probable protein brick1; PDBTitle: structure and control of the actin regulatory wave complex 74 c3cm9J_ not modelled 12.9 25 PDB header:immune system Chain: J: PDB Molecule:secretory component; PDBTitle: solution structure of human siga2 75 c3chnJ_ not modelled 12.9 25 PDB header:immune system Chain: J: PDB Molecule:secretory component; PDBTitle: solution structure of human secretory iga1 76 c3rbgB_ not modelled 12.7 17 PDB header:immune system Chain: B: PDB Molecule:cytotoxic and regulatory t-cell molecule; PDBTitle: crystal structure analysis of class-i mhc restricted t-cell associated2 molecule 77 c1tx2A_ not modelled 12.7 42 PDB header:transferase Chain: A: PDB Molecule:dhps, dihydropteroate synthase; PDBTitle: dihydropteroate synthetase, with bound inhibitor manic, from bacillus2 anthracis 78 d1tx2a_ not modelled 12.7 42 Fold:TIM beta/alpha-barrel Superfamily:Dihydropteroate synthetase-like Family:Dihydropteroate synthetase 79 d1wdkc2 not modelled 12.6 13 Fold:Thiolase-like Superfamily:Thiolase-like Family:Thiolase-related 80 d2ijra1 not modelled 12.4 11 Fold:Api92-like Superfamily:Api92-like Family:Api92-like 81 d1ox0a2 not modelled 12.3 36 Fold:Thiolase-like Superfamily:Thiolase-like Family:Thiolase-related 82 c3ni0A_ not modelled 12.2 32 PDB header:immune system Chain: A: PDB Molecule:bone marrow stromal antigen 2; PDBTitle: crystal structure of mouse bst-2/tetherin ectodomain 83 c3tr9A_ not modelled 12.2 25 PDB header:transferase Chain: A: PDB Molecule:dihydropteroate synthase; PDBTitle: structure of a dihydropteroate synthase (folp) in complex with pteroic2 acid from coxiella burnetii 84 d1hkfa_ not modelled 12.1 8 Fold:Immunoglobulin-like beta-sandwich Superfamily:Immunoglobulin Family:V set domains (antibody variable domain-like) 85 c2xdjF_ not modelled 12.1 6 PDB header:unknown function Chain: F: PDB Molecule:uncharacterized protein ybgf; PDBTitle: crystal structure of the n-terminal domain of e.coli ybgf 86 c1ci6A_ not modelled 12.0 9 PDB header:transcription Chain: A: PDB Molecule:transcription factor atf-4; PDBTitle: transcription factor atf4-c/ebp beta bzip heterodimer 87 c1ca9D_ not modelled 11.9 23 PDB header:tnf signaling Chain: D: PDB Molecule:protein (tnf receptor associated factor 2); PDBTitle: structure of tnf receptor associated factor 2 in complex2 with a peptide from tnf-r2 88 c1ei3E_ not modelled 11.8 3 PDB header: PDB COMPND: 89 c1fmhA_ not modelled 11.7 31 PDB header:transcription Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: nmr solution structure of a designed heterodimeric leucine2 zipper 90 c1t2kD_ not modelled 11.7 16 PDB header:transcription/dna Chain: D: PDB Molecule:cyclic-amp-dependent transcription factor atf-2; PDBTitle: structure of the dna binding domains of irf3, atf-2 and jun2 bound to dna 91 d1nldl1 not modelled 11.5 7 Fold:Immunoglobulin-like beta-sandwich Superfamily:Immunoglobulin Family:V set domains (antibody variable domain-like) 92 c3m9bK_ not modelled 11.5 15 PDB header:chaperone Chain: K: PDB Molecule:proteasome-associated atpase; PDBTitle: crystal structure of the amino terminal coiled coil domain and the2 inter domain of the mycobacterium tuberculosis proteasomal atpase mpa 93 c1fosF_ not modelled 11.3 16 PDB header:transcription/dna Chain: F: PDB Molecule:c-jun proto-oncogene protein; PDBTitle: two human c-fos:c-jun:dna complexes 94 d1ub5a1 not modelled 11.1 4 Fold:Immunoglobulin-like beta-sandwich Superfamily:Immunoglobulin Family:V set domains (antibody variable domain-like) 95 c1jccC_ not modelled 10.8 3 PDB header:membrane protein Chain: C: PDB Molecule:major outer membrane lipoprotein; PDBTitle: crystal structure of a novel alanine-zipper trimer at 1.7 a2 resolution, v13a,l16a,v20a,l23a,v27a,m30a,v34a mutations 96 d1dpta_ not modelled 10.6 13 Fold:Tautomerase/MIF Superfamily:Tautomerase/MIF Family:MIF-related 97 c1fosE_ not modelled 10.6 12 PDB header:transcription/dna Chain: E: PDB Molecule:p55-c-fos proto-oncogene protein; PDBTitle: two human c-fos:c-jun:dna complexes 98 d1h3pl1 not modelled 10.6 2 Fold:Immunoglobulin-like beta-sandwich Superfamily:Immunoglobulin Family:V set domains (antibody variable domain-like) 99 c2q7cC_ not modelled 10.3 11 PDB header:viral protein Chain: C: PDB Molecule:fusion protein between yeast variant gcn4 and PDBTitle: crystal structure of iqn17