Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	E	S	L	T	L	Q	P	I	A	R	V	D	G	T	I	N	L	P	G	S	K	S	V	S	N	R	A	L	L	L	A	A	L	A	H	G	K	T	V	L	T	N	L	L	D	S	D	D	V	R	H	M	L	N	A	L	T	A	L
Secondary structure
SS confidence
Disorder		?	?					?					?						?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		G	V	S	Y	T	L	S	A	D	R	T	R	C	E	I	I	G	N	G	G	P	L	H	A	E	G	A	L	E	L	F	L	G	N	A	G	T	A	M	R	P	L	A	A	A	L	C	L	G	S	N	D	I	V	L	T	G	E	P	R
Secondary structure
SS confidence
Disorder																					?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		M	K	E	R	P	I	G	H	L	V	D	A	L	R	L	G	G	A	K	I	T	Y	L	E	Q	E	N	Y	P	P	L	R	L	Q	G	G	F	T	G	G	N	V	D	V	D	G	S	V	S	S	Q	F	L	T	A	L	L	M	T	A
Secondary structure
SS confidence
Disorder		?			?																																													?
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence		P	L	A	P	E	D	T	V	I	R	I	K	G	D	L	V	S	K	P	Y	I	D	I	T	L	N	L	M	K	T	F	G	V	E	I	E	N	Q	H	Y	Q	Q	F	V	V	K	G	G	Q	S	Y	Q	S	P	G	T	Y	L	V	E
Secondary structure
SS confidence
Disorder				?
Disorder confidence
		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Sequence		G	D	A	S	S	A	S	Y	F	L	A	A	A	A	I	K	G	G	T	V	K	V	T	G	I	G	R	N	S	M	Q	G	D	I	R	F	A	D	V	L	E	K	M	G	A	T	I	C	W	G	D	D	Y	I	S	C	T	R	G	E
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Sequence		L	N	A	I	D	M	D	M	N	H	I	P	D	A	A	M	T	I	A	T	A	A	L	F	A	K	G	T	T	T	L	R	N	I	Y	N	W	R	V	K	E	T	D	R	L	F	A	M	A	T	E	L	R	K	V	G	A	E	V	E
Secondary structure
SS confidence
Disorder		?																									?
Disorder confidence
		.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence		E	G	H	D	Y	I	R	I	T	P	P	E	K	L	N	F	A	E	I	A	T	Y	N	D	H	R	M	A	M	C	F	S	L	V	A	L	S	D	T	P	V	T	I	L	D	P	K	C	T	A	K	T	F	P	D	Y	F	E	Q	L
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.
Sequence		A	R	I	S	Q	A	A
Secondary structure
SS confidence
Disorder				?	?	?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 1g6s chain A Region: 1 - 427 Aligned: 427 Modelled: 427 Confidence: 100.0% Identity: 100% Fold: IF3-like Superfamily: EPT/RTPC-like Family: Enolpyruvate transferase, EPT Phyre2 PDB 2o0z chain A Region: 1 - 424 Aligned: 414 Modelled: 418 Confidence: 100.0% Identity: 31% PDB header:transferase Chain: A: PDB Molecule:3-phosphoshikimate 1-carboxyvinyltransferase; PDBTitle: mycobacterium tuberculosis epsp synthase in complex with2 product (eps) Phyre2 PDB 1rf6 chain A Region: 1 - 423 Aligned: 410 Modelled: 400 Confidence: 100.0% Identity: 26% Fold: IF3-like Superfamily: EPT/RTPC-like Family: Enolpyruvate transferase, EPT Phyre2 PDB 3r38 chain A Region: 1 - 425 Aligned: 402 Modelled: 424 Confidence: 100.0% Identity: 21% PDB header:transferase Chain: A: PDB Molecule:udp-n-acetylglucosamine 1-carboxyvinyltransferase 1; PDBTitle: 2.23 angstrom resolution crystal structure of udp-n-acetylglucosamine2 1-carboxyvinyltransferase (mura) from listeria monocytogenes egd-e Phyre2 PDB 3roi chain A Region: 1 - 425 Aligned: 408 Modelled: 424 Confidence: 100.0% Identity: 33% PDB header:transferase Chain: A: PDB Molecule:3-phosphoshikimate 1-carboxyvinyltransferase; PDBTitle: 2.20 angstrom resolution structure of 3-phosphoshikimate 1-2 carboxyvinyltransferase (aroa) from coxiella burnetii Phyre2 PDB 2pqd chain A Region: 2 - 425 Aligned: 413 Modelled: 419 Confidence: 100.0% Identity: 28% PDB header:transferase Chain: A: PDB Molecule:3-phosphoshikimate 1-carboxyvinyltransferase; PDBTitle: a100g cp4 epsps liganded with (r)-difluoromethyl tetrahedral reaction2 intermediate analog Phyre2 PDB 1uae chain A Region: 1 - 425 Aligned: 403 Modelled: 424 Confidence: 100.0% Identity: 22% Fold: IF3-like Superfamily: EPT/RTPC-like Family: Enolpyruvate transferase, EPT Phyre2 PDB 3rmt chain B Region: 2 - 425 Aligned: 408 Modelled: 419 Confidence: 100.0% Identity: 29% PDB header:transferase Chain: B: PDB Molecule:3-phosphoshikimate 1-carboxyvinyltransferase 1; PDBTitle: crystal structure of putative 5-enolpyruvoylshikimate-3-phosphate2 synthase from bacillus halodurans c-125 Phyre2 PDB 1ejd chain A Region: 1 - 425 Aligned: 403 Modelled: 411 Confidence: 100.0% Identity: 22% Fold: IF3-like Superfamily: EPT/RTPC-like Family: Enolpyruvate transferase, EPT Phyre2 PDB 2yvw chain A Region: 2 - 425 Aligned: 401 Modelled: 413 Confidence: 100.0% Identity: 18% PDB header:transferase Chain: A: PDB Molecule:udp-n-acetylglucosamine 1-carboxyvinyltransferase; PDBTitle: crystal structure of udp-n-acetylglucosamine 1-carboxyvinyltransferase2 from aquifex aeolicus vf5 Phyre2 PDB 1p88 chain A Region: 25 - 240 Aligned: 216 Modelled: 216 Confidence: 100.0% Identity: 100% Fold: IF3-like Superfamily: EPT/RTPC-like Family: Enolpyruvate transferase, EPT Phyre2 PDB 1qmh chain A domain 2 Region: 96 - 297 Aligned: 200 Modelled: 202 Confidence: 95.3% Identity: 17% Fold: IF3-like Superfamily: EPT/RTPC-like Family: RNA 3'-terminal phosphate cyclase, RPTC Phyre2 PDB 1qmi chain C Region: 96 - 239 Aligned: 139 Modelled: 144 Confidence: 95.3% Identity: 21% PDB header:rna 3'-terminal phosphate cyclase Chain: C: PDB Molecule:rna 3'-terminal phosphate cyclase; PDBTitle: crystal structure of rna 3'-terminal phosphate cyclase, an2 ubiquitous enzyme with unusual topology Phyre2 PDB 3pqv chain D Region: 96 - 239 Aligned: 140 Modelled: 144 Confidence: 84.0% Identity: 16% PDB header:unknown function Chain: D: PDB Molecule:rcl1 protein; PDBTitle: cyclase homolog Phyre2 PDB 2dsj chain A Region: 48 - 140 Aligned: 78 Modelled: 91 Confidence: 60.1% Identity: 13% PDB header:transferase Chain: A: PDB Molecule:pyrimidine-nucleoside (thymidine) phosphorylase; PDBTitle: crystal structure of project id tt0128 from thermus thermophilus hb8 Phyre2 PDB 1v8g chain B Region: 28 - 140 Aligned: 93 Modelled: 113 Confidence: 46.1% Identity: 20% PDB header:transferase Chain: B: PDB Molecule:anthranilate phosphoribosyltransferase; PDBTitle: crystal structure of anthranilate phosphoribosyltransferase2 (trpd) from thermus thermophilus hb8 Phyre2 PDB 3h5q chain A Region: 28 - 140 Aligned: 91 Modelled: 100 Confidence: 46.1% Identity: 19% PDB header:transferase Chain: A: PDB Molecule:pyrimidine-nucleoside phosphorylase; PDBTitle: crystal structure of a putative pyrimidine-nucleoside phosphorylase2 from staphylococcus aureus Phyre2 PDB 3g0t chain A Region: 311 - 427 Aligned: 117 Modelled: 117 Confidence: 39.9% Identity: 9% PDB header:transferase Chain: A: PDB Molecule:putative aminotransferase; PDBTitle: crystal structure of putative aspartate aminotransferase (np_905498.1)2 from porphyromonas gingivalis w83 at 1.75 a resolution Phyre2 PDB 1ni9 chain A Region: 1 - 111 Aligned: 101 Modelled: 111 Confidence: 38.6% Identity: 20% Fold: Carbohydrate phosphatase Superfamily: Carbohydrate phosphatase Family: GlpX-like bacterial fructose-1,6-bisphosphatase Phyre2 PDB 1x9z chain A Region: 336 - 370 Aligned: 35 Modelled: 35 Confidence: 30.3% Identity: 14% Fold: DNA mismatch repair protein MutL Superfamily: DNA mismatch repair protein MutL Family: DNA mismatch repair protein MutL Phyre2 1 d1g6sa_ 2 c2o0zA_ 3 d1rf6a_ 4 c3r38A_ 5 c3roiA_ 6 c2pqdA_ 7 d1uaea_ 8 c3rmtB_ 9 d1ejda_ 10 c2yvwA_ 11 d1p88a_ 12 d1qmha2 13 c1qmiC_ 14 c3pqvD_ 15 c2dsjA_ 16 c1v8gB_ 17 c3h5qA_ 18 c3g0tA_ 19 d1ni9a_ 20 d1x9za_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1g6sa_ 100.0 100 Fold:IF3-like Superfamily:EPT/RTPC-like Family:Enolpyruvate transferase, EPT 2 c2o0zA_ 100.0 31 PDB header:transferase Chain: A: PDB Molecule:3-phosphoshikimate 1-carboxyvinyltransferase; PDBTitle: mycobacterium tuberculosis epsp synthase in complex with2 product (eps) 3 d1rf6a_ 100.0 26 Fold:IF3-like Superfamily:EPT/RTPC-like Family:Enolpyruvate transferase, EPT 4 c3r38A_ 100.0 21 PDB header:transferase Chain: A: PDB Molecule:udp-n-acetylglucosamine 1-carboxyvinyltransferase 1; PDBTitle: 2.23 angstrom resolution crystal structure of udp-n-acetylglucosamine2 1-carboxyvinyltransferase (mura) from listeria monocytogenes egd-e 5 c3roiA_ 100.0 33 PDB header:transferase Chain: A: PDB Molecule:3-phosphoshikimate 1-carboxyvinyltransferase; PDBTitle: 2.20 angstrom resolution structure of 3-phosphoshikimate 1-2 carboxyvinyltransferase (aroa) from coxiella burnetii 6 c2pqdA_ 100.0 28 PDB header:transferase Chain: A: PDB Molecule:3-phosphoshikimate 1-carboxyvinyltransferase; PDBTitle: a100g cp4 epsps liganded with (r)-difluoromethyl tetrahedral reaction2 intermediate analog 7 d1uaea_ 100.0 22 Fold:IF3-like Superfamily:EPT/RTPC-like Family:Enolpyruvate transferase, EPT 8 c3rmtB_ 100.0 29 PDB header:transferase Chain: B: PDB Molecule:3-phosphoshikimate 1-carboxyvinyltransferase 1; PDBTitle: crystal structure of putative 5-enolpyruvoylshikimate-3-phosphate2 synthase from bacillus halodurans c-125 9 d1ejda_ 100.0 22 Fold:IF3-like Superfamily:EPT/RTPC-like Family:Enolpyruvate transferase, EPT 10 c2yvwA_ 100.0 18 PDB header:transferase Chain: A: PDB Molecule:udp-n-acetylglucosamine 1-carboxyvinyltransferase; PDBTitle: crystal structure of udp-n-acetylglucosamine 1-carboxyvinyltransferase2 from aquifex aeolicus vf5 11 d1p88a_ 100.0 100 Fold:IF3-like Superfamily:EPT/RTPC-like Family:Enolpyruvate transferase, EPT 12 d1qmha2 95.3 17 Fold:IF3-like Superfamily:EPT/RTPC-like Family:RNA 3'-terminal phosphate cyclase, RPTC 13 c1qmiC_ 95.3 21 PDB header:rna 3'-terminal phosphate cyclase Chain: C: PDB Molecule:rna 3'-terminal phosphate cyclase; PDBTitle: crystal structure of rna 3'-terminal phosphate cyclase, an2 ubiquitous enzyme with unusual topology 14 c3pqvD_ 84.0 16 PDB header:unknown function Chain: D: PDB Molecule:rcl1 protein; PDBTitle: cyclase homolog 15 c2dsjA_ 60.1 13 PDB header:transferase Chain: A: PDB Molecule:pyrimidine-nucleoside (thymidine) phosphorylase; PDBTitle: crystal structure of project id tt0128 from thermus thermophilus hb8 16 c1v8gB_ 46.1 20 PDB header:transferase Chain: B: PDB Molecule:anthranilate phosphoribosyltransferase; PDBTitle: crystal structure of anthranilate phosphoribosyltransferase2 (trpd) from thermus thermophilus hb8 17 c3h5qA_ 46.1 19 PDB header:transferase Chain: A: PDB Molecule:pyrimidine-nucleoside phosphorylase; PDBTitle: crystal structure of a putative pyrimidine-nucleoside phosphorylase2 from staphylococcus aureus 18 c3g0tA_ 39.9 9 PDB header:transferase Chain: A: PDB Molecule:putative aminotransferase; PDBTitle: crystal structure of putative aspartate aminotransferase (np_905498.1)2 from porphyromonas gingivalis w83 at 1.75 a resolution 19 d1ni9a_ 38.6 20 Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:GlpX-like bacterial fructose-1,6-bisphosphatase 20 d1x9za_ 30.3 14 Fold:DNA mismatch repair protein MutL Superfamily:DNA mismatch repair protein MutL Family:DNA mismatch repair protein MutL 21 c1khdD_ not modelled 29.4 19 PDB header:transferase Chain: D: PDB Molecule:anthranilate phosphoribosyltransferase; PDBTitle: crystal structure analysis of the anthranilate2 phosphoribosyltransferase from erwinia carotovora at 1.93 resolution (current name, pectobacterium carotovorum) 22 c1otpA_ not modelled 28.0 19 PDB header:phosphorylase Chain: A: PDB Molecule:thymidine phosphorylase; PDBTitle: structural and theoretical studies suggest domain movement produces an2 active conformation of thymidine phosphorylase 23 d1a9xa1 not modelled 27.2 5 Fold:Carbamoyl phosphate synthetase, large subunit connection domain Superfamily:Carbamoyl phosphate synthetase, large subunit connection domain Family:Carbamoyl phosphate synthetase, large subunit connection domain 24 c2ci6A_ not modelled 26.8 17 PDB header:hydrolase Chain: A: PDB Molecule:ng, ng-dimethylarginine dimethylaminohydrolase 1; PDBTitle: crystal structure of dimethylarginine2 dimethylaminohydrolase i bound with zinc low ph 25 d1p5ja_ not modelled 23.9 24 Fold:Tryptophan synthase beta subunit-like PLP-dependent enzymes Superfamily:Tryptophan synthase beta subunit-like PLP-dependent enzymes Family:Tryptophan synthase beta subunit-like PLP-dependent enzymes 26 c1p5jA_ not modelled 23.9 24 PDB header:lyase Chain: A: PDB Molecule:l-serine dehydratase; PDBTitle: crystal structure analysis of human serine dehydratase 27 d1h70a_ not modelled 21.7 15 Fold:Pentein, beta/alpha-propeller Superfamily:Pentein Family:Dimethylarginine dimethylaminohydrolase DDAH 28 c2hw4A_ not modelled 18.3 14 PDB header:structural genomics, hydrolase Chain: A: PDB Molecule:14 kda phosphohistidine phosphatase; PDBTitle: crystal structure of human phosphohistidine phosphatase 29 c1brwB_ not modelled 18.0 17 PDB header:transferase Chain: B: PDB Molecule:protein (pyrimidine nucleoside phosphorylase); PDBTitle: the crystal structure of pyrimidine nucleoside2 phosphorylase in a closed conformation 30 c2bpqB_ not modelled 17.7 20 PDB header:transferase Chain: B: PDB Molecule:anthranilate phosphoribosyltransferase; PDBTitle: anthranilate phosphoribosyltransferase (trpd) from2 mycobacterium tuberculosis (apo structure) 31 d2hw4a1 not modelled 16.8 14 Fold:PHP14-like Superfamily:PHP14-like Family:Janus/Ocnus 32 c3i4aA_ not modelled 14.7 16 PDB header:hydrolase Chain: A: PDB Molecule:n(g),n(g)-dimethylarginine dimethylaminohydrolase PDBTitle: crystal structure of dimethylarginine2 dimethylaminohydrolase-1 (ddah-1) in complex with n5-(1-3 iminopropyl)-l-ornithine 33 c2j0fC_ not modelled 13.5 19 PDB header:transferase Chain: C: PDB Molecule:thymidine phosphorylase; PDBTitle: structural basis for non-competitive product inhibition in2 human thymidine phosphorylase: implication for drug design 34 c2jugB_ not modelled 11.7 15 PDB header:biosynthetic protein Chain: B: PDB Molecule:tubc protein; PDBTitle: multienzyme docking in hybrid megasynthetases 35 c3nfiB_ not modelled 11.3 16 PDB header:dna binding protein, transcription Chain: B: PDB Molecule:dna-directed rna polymerase i subunit rpa49; PDBTitle: crystal structure of tandem winged helix domain of rna polymerase i2 subunit a49 36 c3czdA_ not modelled 10.9 26 PDB header:hydrolase Chain: A: PDB Molecule:glutaminase kidney isoform; PDBTitle: crystal structure of human glutaminase in complex with l-glutamate 37 c3uo9B_ not modelled 10.8 26 PDB header:hydrolase/hydrolase inhibitor Chain: B: PDB Molecule:glutaminase kidney isoform, mitochondrial; PDBTitle: crystal structure of human gac in complex with glutamate and bptes 38 d1d6za4 not modelled 10.7 19 Fold:N domain of copper amine oxidase-like Superfamily:Copper amine oxidase, domain N Family:Copper amine oxidase, domain N 39 c2ox1C_ not modelled 10.6 13 PDB header:lyase Chain: C: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: archaeal dehydroquinase 40 c2hzfA_ not modelled 10.1 16 PDB header:electron transport, oxidoreductase Chain: A: PDB Molecule:glutaredoxin-1; PDBTitle: crystal structures of a poxviral glutaredoxin in the oxidized and2 reduced states show redox-correlated structural changes 41 c3gkuB_ not modelled 9.9 17 PDB header:rna binding protein Chain: B: PDB Molecule:probable rna-binding protein; PDBTitle: crystal structure of a probable rna-binding protein from clostridium2 symbiosum atcc 14940 42 c3gabC_ not modelled 9.8 20 PDB header:hydrolase Chain: C: PDB Molecule:dna mismatch repair protein mutl; PDBTitle: c-terminal domain of bacillus subtilis mutl crystal form i 43 d2dy1a4 not modelled 9.6 15 Fold:Ferredoxin-like Superfamily:EF-G C-terminal domain-like Family:EF-G/eEF-2 domains III and V 44 c3ss4C_ not modelled 9.4 26 PDB header:hydrolase Chain: C: PDB Molecule:glutaminase c; PDBTitle: crystal structure of mouse glutaminase c, phosphate-bound form 45 d1u60a_ not modelled 9.4 15 Fold:beta-lactamase/transpeptidase-like Superfamily:beta-lactamase/transpeptidase-like Family:Glutaminase 46 d1jjcb2 not modelled 9.3 30 Fold:Putative DNA-binding domain Superfamily:Putative DNA-binding domain Family:Domains B1 and B5 of PheRS-beta, PheT 47 d1nh2a1 not modelled 8.8 25 Fold:TBP-like Superfamily:TATA-box binding protein-like Family:TATA-box binding protein (TBP), C-terminal domain 48 d1o17a2 not modelled 8.4 33 Fold:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Family:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 49 c3ke2A_ not modelled 8.2 13 PDB header:unknown function Chain: A: PDB Molecule:uncharacterized protein yp_928783.1; PDBTitle: crystal structure of a duf2131 family protein (sama_2911) from2 shewanella amazonensis sb2b at 2.50 a resolution 50 c2zxrA_ not modelled 8.0 20 PDB header:hydrolase Chain: A: PDB Molecule:single-stranded dna specific exonuclease recj; PDBTitle: crystal structure of recj in complex with mg2+ from thermus2 thermophilus hb8 51 d1ekxa2 not modelled 7.6 17 Fold:ATC-like Superfamily:Aspartate/ornithine carbamoyltransferase Family:Aspartate/ornithine carbamoyltransferase 52 c3nr6A_ not modelled 7.3 17 PDB header:hydrolase/inhibitor Chain: A: PDB Molecule:protease p14; PDBTitle: crystal structure of xenotropic murine leukemia virus-related virus2 (xmrv) protease 53 c3gocB_ not modelled 7.3 8 PDB header:hydrolase Chain: B: PDB Molecule:endonuclease v; PDBTitle: crystal structure of the endonuclease v (sav1684) from streptomyces2 avermitilis. northeast structural genomics consortium target svr196 54 c2pbyB_ not modelled 7.2 15 PDB header:hydrolase Chain: B: PDB Molecule:glutaminase; PDBTitle: probable glutaminase from geobacillus kaustophilus hta426 55 c3kzpA_ not modelled 7.2 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative diguanylate cyclase/phosphodiesterase; PDBTitle: crystal structure of putative diguanylate cyclase/phosphodiesterase2 from listaria monocytigenes 56 d1mkia_ not modelled 7.2 17 Fold:beta-lactamase/transpeptidase-like Superfamily:beta-lactamase/transpeptidase-like Family:Glutaminase 57 d1qnaa1 not modelled 6.7 22 Fold:TBP-like Superfamily:TATA-box binding protein-like Family:TATA-box binding protein (TBP), C-terminal domain 58 d2atca2 not modelled 6.6 15 Fold:ATC-like Superfamily:Aspartate/ornithine carbamoyltransferase Family:Aspartate/ornithine carbamoyltransferase 59 c3ih9A_ not modelled 6.4 15 PDB header:hydrolase Chain: A: PDB Molecule:salt-tolerant glutaminase; PDBTitle: crystal structure analysis of mglu in its tris form 60 c2dfwA_ not modelled 6.3 11 PDB header:hydrolase Chain: A: PDB Molecule:salt-tolerant glutaminase; PDBTitle: crystal structure of a major fragment of the salt-tolerant2 glutaminase from micrococcus luteus k-3 61 d1cdwa1 not modelled 6.1 28 Fold:TBP-like Superfamily:TATA-box binding protein-like Family:TATA-box binding protein (TBP), C-terminal domain 62 c3s8iA_ not modelled 5.6 11 PDB header:hydrolase Chain: A: PDB Molecule:protein ddi1 homolog 1; PDBTitle: the retroviral-like protease (rvp) domain of human ddi1 63 c2fvgA_ not modelled 5.5 4 PDB header:hydrolase Chain: A: PDB Molecule:endoglucanase; PDBTitle: crystal structure of endoglucanase (tm1049) from thermotoga maritima2 at 2.01 a resolution 64 d1ml4a2 not modelled 5.5 10 Fold:ATC-like Superfamily:Aspartate/ornithine carbamoyltransferase Family:Aspartate/ornithine carbamoyltransferase 65 d1nh8a2 not modelled 5.4 18 Fold:Ferredoxin-like Superfamily:GlnB-like Family:ATP phosphoribosyltransferase (ATP-PRTase, HisG), regulatory C-terminal domain 66 d1vpka1 not modelled 5.1 9 Fold:DNA clamp Superfamily:DNA clamp Family:DNA polymerase III, beta subunit

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0