Email l.a.kelley@imperial.ac.uk Description P33349 Date Thu Jan 5 11:51:51 GMT 2012 Unique Job ID 8012b355dc6db436

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2g5gx1 97.6 12 Fold:EreA/ChaN-like Superfamily:EreA/ChaN-like Family:ChaN-like 2 c3ol4B_ 77.8 10 PDB header:unknown function Chain: B: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of a putative uncharacterized protein from2 mycobacterium smegmatis, an ortholog of rv0543c 3 c2qgmA_ 71.4 17 PDB header:biosynthetic protein Chain: A: PDB Molecule:succinoglycan biosynthesis protein; PDBTitle: crystal structure of succinoglycan biosynthesis protein at2 the resolution 1.7 a. northeast structural genomics3 consortium target bcr136. 4 d2qgma1 71.4 17 Fold:EreA/ChaN-like Superfamily:EreA/ChaN-like Family:EreA-like 5 d2ebfx2 56.7 11 Fold:EreA/ChaN-like Superfamily:EreA/ChaN-like Family:PMT domain-like 6 c3f9vA_ 54.5 16 PDB header:hydrolase Chain: A: PDB Molecule:minichromosome maintenance protein mcm; PDBTitle: crystal structure of a near full-length archaeal mcm: functional2 insights for an aaa+ hexameric helicase 7 c1txkA_ 53.8 17 PDB header:biosynthetic protein Chain: A: PDB Molecule:glucans biosynthesis protein g; PDBTitle: crystal structure of escherichia coli opgg 8 c2ei9A_ 51.2 17 PDB header:gene regulation Chain: A: PDB Molecule:non-ltr retrotransposon r1bmks orf2 protein; PDBTitle: crystal structure of r1bm endonuclease domain 9 c3qfnA_ 50.9 11 PDB header:hydrolase Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of streptococcal asymmetric ap4a hydrolase and2 phosphodiesterase spr1479/saph in complex with inorganic phosphate 10 d1hjra_ 48.6 29 Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:RuvC resolvase 11 c2radB_ 47.5 14 PDB header:biosynthetic protein Chain: B: PDB Molecule:succinoglycan biosynthesis protein; PDBTitle: crystal structure of the succinoglycan biosynthesis2 protein. northeast structural genomics consortium target3 bcr135 12 d1txka1 46.4 17 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:E-set domains of sugar-utilizing enzymes 13 d1ffva1 43.8 14 Fold:CO dehydrogenase ISP C-domain like Superfamily:CO dehydrogenase ISP C-domain like Family:CO dehydrogenase ISP C-domain like 14 d1wdua_ 38.1 8 Fold:DNase I-like Superfamily:DNase I-like Family:DNase I-like 15 d1v97a1 35.7 23 Fold:CO dehydrogenase ISP C-domain like Superfamily:CO dehydrogenase ISP C-domain like Family:CO dehydrogenase ISP C-domain like 16 d1n62a1 34.7 14 Fold:CO dehydrogenase ISP C-domain like Superfamily:CO dehydrogenase ISP C-domain like Family:CO dehydrogenase ISP C-domain like 17 d1kcfa2 33.9 26 Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:Mitochondrial resolvase ydc2 catalytic domain 18 d1t3qa1 32.8 21 Fold:CO dehydrogenase ISP C-domain like Superfamily:CO dehydrogenase ISP C-domain like Family:CO dehydrogenase ISP C-domain like 19 c3f8tA_ 29.5 19 PDB header:hydrolase Chain: A: PDB Molecule:predicted atpase involved in replication control, PDBTitle: crystal structure analysis of a full-length mcm homolog2 from methanopyrus kandleri 20 c3czcA_ 29.3 44 PDB header:transferase Chain: A: PDB Molecule:rmpb; PDBTitle: the crystal structure of a putative pts iib(ptxb) from2 streptococcus mutans 21 d1vkra_ not modelled 28.7 20 Fold:Phosphotyrosine protein phosphatases I-like Superfamily:PTS system IIB component-like Family:PTS system, Lactose/Cellobiose specific IIB subunit 22 c1vkrA_ not modelled 28.7 20 PDB header:transferase Chain: A: PDB Molecule:mannitol-specific pts system enzyme iiabc components; PDBTitle: structure of iib domain of the mannitol-specific permease enzyme ii 23 c3b4sA_ not modelled 28.5 18 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:protein luxt; PDBTitle: crystal structure of a luxt domain from vibrio2 parahaemolyticus rimd 2210633 24 d1zxia1 not modelled 28.0 14 Fold:CO dehydrogenase ISP C-domain like Superfamily:CO dehydrogenase ISP C-domain like Family:CO dehydrogenase ISP C-domain like 25 c1t3qD_ not modelled 27.9 19 PDB header:oxidoreductase Chain: D: PDB Molecule:quinoline 2-oxidoreductase small subunit; PDBTitle: crystal structure of quinoline 2-oxidoreductase from pseudomonas2 putida 86 26 d1rm6c1 not modelled 26.6 23 Fold:CO dehydrogenase ISP C-domain like Superfamily:CO dehydrogenase ISP C-domain like Family:CO dehydrogenase ISP C-domain like 27 c1n60D_ not modelled 26.2 16 PDB header:oxidoreductase Chain: D: PDB Molecule:carbon monoxide dehydrogenase small chain; PDBTitle: crystal structure of the cu,mo-co dehydrogenase (codh); cyanide-2 inactivated form 28 d1g8pa_ not modelled 25.6 15 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Extended AAA-ATPase domain 29 d5easa1 not modelled 23.7 42 Fold:alpha/alpha toroid Superfamily:Terpenoid cyclases/Protein prenyltransferases Family:Terpenoid cyclase N-terminal domain 30 c2kuyA_ not modelled 23.4 42 PDB header:antimicrobial protein Chain: A: PDB Molecule:prebacteriocin glycocin f; PDBTitle: structure of glycocin f 31 d3b55a1 not modelled 23.2 10 Fold:EreA/ChaN-like Superfamily:EreA/ChaN-like Family:EreA-like 32 c3eubJ_ not modelled 22.4 23 PDB header:oxidoreductase Chain: J: PDB Molecule:xanthine dehydrogenase/oxidase; PDBTitle: crystal structure of desulfo-xanthine oxidase with xanthine 33 c1tvmA_ not modelled 22.0 36 PDB header:transferase Chain: A: PDB Molecule:pts system, galactitol-specific iib component; PDBTitle: nmr structure of enzyme gatb of the galactitol-specific2 phosphoenolpyruvate-dependent phosphotransferase system 34 d1n1ba1 not modelled 21.9 42 Fold:alpha/alpha toroid Superfamily:Terpenoid cyclases/Protein prenyltransferases Family:Terpenoid cyclase N-terminal domain 35 c3hrdH_ not modelled 20.1 18 PDB header:oxidoreductase Chain: H: PDB Molecule:nicotinate dehydrogenase small fes subunit; PDBTitle: crystal structure of nicotinate dehydrogenase 36 c1ffuA_ not modelled 19.7 14 PDB header:hydrolase Chain: A: PDB Molecule:cuts, iron-sulfur protein of carbon monoxide PDBTitle: carbon monoxide dehydrogenase from hydrogenophaga2 pseudoflava which lacks the mo-pyranopterin moiety of the3 molybdenum cofactor 37 c3g5rA_ not modelled 19.6 33 PDB header:transferase Chain: A: PDB Molecule:methylenetetrahydrofolate--trna-(uracil-5-)- PDBTitle: crystal structure of thermus thermophilus trmfo in complex with2 tetrahydrofolate 38 c3nbxX_ not modelled 19.3 18 PDB header:hydrolase Chain: X: PDB Molecule:atpase rava; PDBTitle: crystal structure of e. coli rava (regulatory atpase variant a) in2 complex with adp 39 d2yvta1 not modelled 18.7 14 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:TT1561-like 40 d1di0a_ not modelled 17.8 9 Fold:Lumazine synthase Superfamily:Lumazine synthase Family:Lumazine synthase 41 c2obxH_ not modelled 17.7 13 PDB header:transferase Chain: H: PDB Molecule:6,7-dimethyl-8-ribityllumazine synthase 1; PDBTitle: lumazine synthase ribh2 from mesorhizobium loti (gene mll7281, swiss-2 prot entry q986n2) complexed with inhibitor 5-nitro-6-(d-3 ribitylamino)-2,4(1h,3h) pyrimidinedione 42 c1rm6F_ not modelled 17.7 26 PDB header:oxidoreductase Chain: F: PDB Molecule:4-hydroxybenzoyl-coa reductase gamma subunit; PDBTitle: structure of 4-hydroxybenzoyl-coa reductase from thauera2 aromatica 43 c1kcfB_ not modelled 17.7 31 PDB header:hydrolase Chain: B: PDB Molecule:hypothetical 30.2 kd protein c25g10.02 in PDBTitle: crystal structure of the yeast mitochondrial holliday2 junction resolvase, ydc2 44 c3b9jI_ not modelled 17.7 23 PDB header:oxidoreductase Chain: I: PDB Molecule:xanthine oxidase; PDBTitle: structure of xanthine oxidase with 2-hydroxy-6-methylpurine 45 d1ejba_ not modelled 17.4 9 Fold:Lumazine synthase Superfamily:Lumazine synthase Family:Lumazine synthase 46 d1rvv1_ not modelled 17.0 9 Fold:Lumazine synthase Superfamily:Lumazine synthase Family:Lumazine synthase 47 d1vqqa1 not modelled 16.9 36 Fold:Cystatin-like Superfamily:NTF2-like Family:Penicillin binding protein 2a (PBP2A), N-terminal domain 48 d1c41a_ not modelled 16.1 11 Fold:Lumazine synthase Superfamily:Lumazine synthase Family:Lumazine synthase 49 c2j63B_ not modelled 16.1 19 PDB header:lyase Chain: B: PDB Molecule:ap-endonuclease; PDBTitle: crystal structure of ap endonuclease lmap from leishmania2 major 50 d1m5wa_ not modelled 15.9 11 Fold:TIM beta/alpha-barrel Superfamily:Pyridoxine 5'-phosphate synthase Family:Pyridoxine 5'-phosphate synthase 51 d2q4qa1 not modelled 15.9 23 Fold:MTH938-like Superfamily:MTH938-like Family:MTH938-like 52 d1hd7a_ not modelled 15.9 4 Fold:DNase I-like Superfamily:DNase I-like Family:DNase I-like 53 c2yvaB_ not modelled 15.8 14 PDB header:dna binding protein Chain: B: PDB Molecule:dnaa initiator-associating protein diaa; PDBTitle: crystal structure of escherichia coli diaa 54 c3trjC_ not modelled 15.8 13 PDB header:isomerase Chain: C: PDB Molecule:phosphoheptose isomerase; PDBTitle: structure of a phosphoheptose isomerase from francisella tularensis 55 c3oqvA_ not modelled 15.7 17 PDB header:protein binding Chain: A: PDB Molecule:albc; PDBTitle: albc, a cyclodipeptide synthase from streptomyces noursei 56 c2x7mA_ not modelled 15.6 16 PDB header:hydrolase Chain: A: PDB Molecule:archaemetzincin; PDBTitle: crystal structure of archaemetzincin (amza) from methanopyrus2 kandleri at 1.5 a resolution 57 d1b24a2 not modelled 15.6 18 Fold:Homing endonuclease-like Superfamily:Homing endonucleases Family:Group I mobile intron endonuclease 58 c2hjpA_ not modelled 14.9 8 PDB header:hydrolase Chain: A: PDB Molecule:phosphonopyruvate hydrolase; PDBTitle: crystal structure of phosphonopyruvate hydrolase complex with2 phosphonopyruvate and mg++ 59 d1qh8b_ not modelled 14.9 15 Fold:Chelatase-like Superfamily:"Helical backbone" metal receptor Family:Nitrogenase iron-molybdenum protein 60 d1iowa1 not modelled 14.8 10 Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:D-Alanine ligase N-terminal domain 61 d2dfaa1 not modelled 14.7 17 Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:LamB/YcsF-like 62 d1zq1a2 not modelled 14.6 11 Fold:Glutaminase/Asparaginase Superfamily:Glutaminase/Asparaginase Family:Glutaminase/Asparaginase 63 d1q74a_ not modelled 14.2 20 Fold:LmbE-like Superfamily:LmbE-like Family:LmbE-like 64 c3g4dB_ not modelled 14.2 33 PDB header:lyase Chain: B: PDB Molecule:(+)-delta-cadinene synthase isozyme xc1; PDBTitle: crystal structure of (+)-delta-cadinene synthase from gossypium2 arboreum and evolutionary divergence of metal binding motifs for3 catalysis 65 c2j5cB_ not modelled 14.1 33 PDB header:lyase Chain: B: PDB Molecule:1,8-cineole synthase; PDBTitle: rational conversion of substrate and product specificity2 in a monoterpene synthase. structural insights into the3 molecular basis of rapid evolution. 66 d1hc7a1 not modelled 13.9 9 Fold:Anticodon-binding domain-like Superfamily:Class II aaRS ABD-related Family:Anticodon-binding domain of Class II aaRS 67 c3g6sA_ not modelled 13.7 18 PDB header:hydrolase Chain: A: PDB Molecule:putative endonuclease/exonuclease/phosphatase PDBTitle: crystal structure of the2 endonuclease/exonuclease/phosphatase (bvu_0621) from3 bacteroides vulgatus. northeast structural genomics4 consortium target bvr56d 68 c2xhzC_ not modelled 13.7 12 PDB header:isomerase Chain: C: PDB Molecule:arabinose 5-phosphate isomerase; PDBTitle: probing the active site of the sugar isomerase domain from e. coli2 arabinose-5-phosphate isomerase via x-ray crystallography 69 c3mk3L_ not modelled 13.7 6 PDB header:transferase Chain: L: PDB Molecule:6,7-dimethyl-8-ribityllumazine synthase; PDBTitle: crystal structure of lumazine synthase from salmonella typhimurium lt2 70 d1uana_ not modelled 13.6 26 Fold:LmbE-like Superfamily:LmbE-like Family:LmbE-like 71 d1vyba_ not modelled 13.6 32 Fold:DNase I-like Superfamily:DNase I-like Family:DNase I-like 72 c2x9qA_ not modelled 13.5 11 PDB header:ligase Chain: A: PDB Molecule:cyclodipeptide synthetase; PDBTitle: structure of the mycobacterium tuberculosis protein, rv2275,2 demonstrates that cyclodipeptide synthetases are related3 to type i trna-synthetases. 73 d1wsaa_ not modelled 13.2 40 Fold:Glutaminase/Asparaginase Superfamily:Glutaminase/Asparaginase Family:Glutaminase/Asparaginase 74 d1kz1a_ not modelled 13.1 10 Fold:Lumazine synthase Superfamily:Lumazine synthase Family:Lumazine synthase 75 d1nj8a1 not modelled 13.0 10 Fold:Anticodon-binding domain-like Superfamily:Class II aaRS ABD-related Family:Anticodon-binding domain of Class II aaRS 76 c1n20A_ not modelled 13.0 42 PDB header:isomerase Chain: A: PDB Molecule:(+)-bornyl diphosphate synthase; PDBTitle: (+)-bornyl diphosphate synthase: complex with mg and 3-aza-2 2,3-dihydrogeranyl diphosphate 77 d1nqua_ not modelled 13.0 6 Fold:Lumazine synthase Superfamily:Lumazine synthase Family:Lumazine synthase 78 d1iwpb_ not modelled 12.8 17 Fold:Anticodon-binding domain-like Superfamily:B12-dependent dehydatase associated subunit Family:Diol dehydratase, beta subunit 79 d2cula1 not modelled 12.7 11 Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:GidA-like 80 d2d6fa2 not modelled 12.5 13 Fold:Glutaminase/Asparaginase Superfamily:Glutaminase/Asparaginase Family:Glutaminase/Asparaginase 81 d1uh5a_ not modelled 12.3 19 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Tyrosine-dependent oxidoreductases 82 c1hx9A_ not modelled 12.3 42 PDB header:lyase Chain: A: PDB Molecule:5-epi-aristolochene synthase; PDBTitle: crystal structure of teas w273s form 1 83 c2ongA_ not modelled 12.0 25 PDB header:lyase Chain: A: PDB Molecule:4s-limonene synthase; PDBTitle: crystal structure of of limonene synthase with 2-2 fluorogeranyl diphosphate (fgpp). 84 d1nj1a1 not modelled 12.0 12 Fold:Anticodon-binding domain-like Superfamily:Class II aaRS ABD-related Family:Anticodon-binding domain of Class II aaRS 85 c3r89A_ not modelled 11.9 10 PDB header:lyase Chain: A: PDB Molecule:orotidine 5'-phosphate decarboxylase; PDBTitle: crystal structure of orotidine 5-phosphate decarboxylase from2 anaerococcus prevotii dsm 20548 86 c2jc5A_ not modelled 11.9 12 PDB header:hydrolase Chain: A: PDB Molecule:exodeoxyribonuclease; PDBTitle: apurinic apyrimidinic (ap) endonuclease (nape) from2 neisseria meningitidis 87 d2pd4a1 not modelled 11.7 13 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Tyrosine-dependent oxidoreductases 88 d2gc6a1 not modelled 11.7 6 Fold:MurD-like peptide ligases, peptide-binding domain Superfamily:MurD-like peptide ligases, peptide-binding domain Family:Folylpolyglutamate synthetase, C-terminal domain 89 c3lo3E_ not modelled 11.4 35 PDB header:structure genomics, unknown function Chain: E: PDB Molecule:uncharacterized conserved protein; PDBTitle: the crystal structure of a conserved functionally unknown2 protein from colwellia psychrerythraea 34h. 90 c2bibA_ not modelled 11.4 19 PDB header:hydrolase Chain: A: PDB Molecule:teichoic acid phosphorylcholine esterase/ choline binding PDBTitle: crystal structure of the complete modular teichioic acid2 phosphorylcholine esterase pce (cbpe) from streptococcus3 pneumoniae 91 c3lx6B_ not modelled 11.4 26 PDB header:transferase Chain: B: PDB Molecule:cytosine-specific methyltransferase; PDBTitle: structure of probable cytosine-specific methyltransferase from2 shigella flexneri 92 d3bzka5 not modelled 11.3 6 Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:Tex RuvX-like domain-like 93 c2ixdB_ not modelled 11.3 18 PDB header:hydrolase Chain: B: PDB Molecule:lmbe-related protein; PDBTitle: crystal structure of the putative deacetylase bc1534 from2 bacilus cereus 94 c1zlpA_ not modelled 11.2 11 PDB header:lyase Chain: A: PDB Molecule:petal death protein; PDBTitle: petal death protein psr132 with cysteine-linked glutaraldehyde forming2 a thiohemiacetal adduct 95 c3tebA_ not modelled 11.2 6 PDB header:hydrolase Chain: A: PDB Molecule:endonuclease/exonuclease/phosphatase; PDBTitle: endonuclease/exonuclease/phosphatase family protein from leptotrichia2 buccalis c-1013-b 96 c3iv4A_ not modelled 11.2 38 PDB header:oxidoreductase Chain: A: PDB Molecule:putative oxidoreductase; PDBTitle: a putative oxidoreductase with a thioredoxin fold 97 c3n0fA_ not modelled 11.2 42 PDB header:lyase Chain: A: PDB Molecule:isoprene synthase; PDBTitle: crystal structure of isoprene synthase from grey poplar leaves2 (populus x canescens) 98 d1v6ta_ not modelled 10.8 17 Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:LamB/YcsF-like 99 d1eexb_ not modelled 10.7 11 Fold:Anticodon-binding domain-like Superfamily:B12-dependent dehydatase associated subunit Family:Diol dehydratase, beta subunit