PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d1n1ba1

Fold library id	Fold	Superfamily	Family
d1n1ba1	alpha/alpha toroid	Terpenoid cyclases/Protein prenyltransferases	Terpenoid cyclase N-terminal domain

Links to external resources
Added to library: Tue Mar 16 12:39:39 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L W D S N Y I Q S L N T P Y T E E R H L D R K A E L I V Q V R I L L K E K M E P V Q Q L E L I H D L K Y L G L S D F F Q D E I K E I L G V I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T S S
T T
G G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Y N E H K C F H N N E V E K M D L Y F T A L G F R L L R Q H G F N I S Q D V F N C F K N E K G I D F K A S L A Q D T K G M L Q L Y E A S F L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T
G G G G G G G B
T T S S S B
G G G G G
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 .

Sequence L R K G E D T L E L A R E F A T K C L Q K K L D D E N L L L W I R H S L D L P L H W R I Q S V E A R W F I D A Y A R R P D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T
S
G G G
T T T S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	W	D	S	N	Y	I	Q	S	L	N	T	P	Y	T	E	E	R	H	L	D	R	K	A	E	L	I	V	Q	V	R	I	L	L	K	E	K	M	E	P	V	Q	Q	L	E	L	I	H	D	L	K	Y	L	G	L	S	D	F	F	Q	D	E	I	K	E	I	L	G	V	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S	T	T	S																				S																	T	T		G	G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	N	E	H	K	C	F	H	N	N	E	V	E	K	M	D	L	Y	F	T	A	L	G	F	R	L	L	R	Q	H	G	F	N	I	S	Q	D	V	F	N	C	F	K	N	E	K	G	I	D	F	K	A	S	L	A	Q	D	T	K	G	M	L	Q	L	Y	E	A	S	F	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S																T	T					G	G	G	G	G	G	G	B		T	T	S	S	S	B		G	G	G	G	G													T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Sequence	L	R	K	G	E	D	T	L	E	L	A	R	E	F	A	T	K	C	L	Q	K	K	L	D	D	E	N	L	L	L	W	I	R	H	S	L	D	L	P	L	H	W	R	I	Q	S	V	E	A	R	W	F	I	D	A	Y	A	R	R	P	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T																			T															S		G	G	G			T	T	T	S