PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2x9qA_

Fold library id	PDB Header	Molecule	Title
c2x9qA_	PDB header: ligase	Chain: A: PDB Molecule: cyclodipeptide synthetase;	PDBTitle: structure of the mycobacterium tuberculosis protein, rv2275,2 demonstrates that cyclodipeptide synthetases are related3 to type i trna-synthetases.

Links to external resources
Added to library: Sat Sep 25 08:44:58 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence F Q L G R R I P E A T A Q E G F L V R P F T Q Q C Q I I H T E G D H A V I G V S P G N S Y F S R Q R L R D L G L W G L T N F D R V D F V Y T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
T T S S T
T T
T T S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D V H V A E S Y E A L G D S A I E A R R K A V K N I R G V R A K I T T T V N E L D P A G A R L C V R P X S E F Q S N E A Y R E L H A D L L T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T T
T T
S S G G G G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence R L K D D E D X R A V C Q D L V R R F L S T K G A T A T Q E Q V C X D Y I C A E A P L F L D T P A I L G V P S S L N C Y H Q S L P L A E X L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S
T T

. . . . . . . . . 220 . . . . . . . . . 230 .

Sequence Y A R G S G L R A S R N Q G H A I V T P D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S S S S
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	F	Q	L	G	R	R	I	P	E	A	T	A	Q	E	G	F	L	V	R	P	F	T	Q	Q	C	Q	I	I	H	T	E	G	D	H	A	V	I	G	V	S	P	G	N	S	Y	F	S	R	Q	R	L	R	D	L	G	L	W	G	L	T	N	F	D	R	V	D	F	V	Y	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	S								T	T						S	S										T									T	T		T	T	S																	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	V	H	V	A	E	S	Y	E	A	L	G	D	S	A	I	E	A	R	R	K	A	V	K	N	I	R	G	V	R	A	K	I	T	T	T	V	N	E	L	D	P	A	G	A	R	L	C	V	R	P	X	S	E	F	Q	S	N	E	A	Y	R	E	L	H	A	D	L	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S								T	T																														T	T		S	S						G	G	G	G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	L	K	D	D	E	D	X	R	A	V	C	Q	D	L	V	R	R	F	L	S	T	K	G	A	T	A	T	Q	E	Q	V	C	X	D	Y	I	C	A	E	A	P	L	F	L	D	T	P	A	I	L	G	V	P	S	S	L	N	C	Y	H	Q	S	L	P	L	A	E	X	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																																						S							S	S			T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Sequence	Y	A	R	G	S	G	L	R	A	S	R	N	Q	G	H	A	I	V	T	P	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T		S	S	S	S	S				T	T