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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3g4dB_

Fold library idPDB HeaderMoleculeTitle
c3g4dB_PDB header: lyaseChain: B: PDB Molecule: (+)-delta-cadinene synthase isozyme xc1;PDBTitle: crystal structure of (+)-delta-cadinene synthase from2 gossypium arboreum and evolutionary divergence of metal3 binding motifs for catalysis


Added to library: Sat Aug 28 18:53:34 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QPSIWGDLFLNCPDKNIAETEKRHQQLKEEVRKMIVAPMANSTQKLAFIDSVQRLGVSYHFTKEIEDELE
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Known secondary structure (DSSP)


SSTTTTSS






S

SSTT
GGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence NIYHNNDLYTTSIRFRLLREHGYNVSCDVFNKFKDEQGNFKSSVTSDVRGLLELYQASYLRVHGEDILDE
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Known secondary structure (DSSP) TT


TT



GGGGGGGB
SSSSB
SSSTT
TT

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence AISFTTHHLSLAVASLDHPLSEEVSHALKQSIRRGLPRVEARHYLSVYQDIESHNKALLEFAKIDFNMLQ
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Known secondary structure (DSSP) TT

TTS
STTS
SSSSSSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence FLHRKELSEICRWWKDLDFQRKLPYARDRVVEGYFWISGVYFEPQYSLGRKMLTKVIAMASIVDDTYDSY
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Known secondary structure (DSSP)
TTTS
SS





SGGGSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence ATYEELIPYTNAIERWDIKCIDEIPEYMKPSYKALLDVYEEMVQLVAEHGRQYRVEYAKNAMIRLAQSYL
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Known secondary structure (DSSP)


SGGGGGSS
GGGTTT
T
 .........360.........370.........380.........390.........400.........410.........420
Sequence VEAKWTLQNYKPSFEEFKANALPTCGYAMLAITSFVGMGDIVTPETFKWAASDPKIIQASTIICRFMDDV
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Known secondary structure (DSSP) TT



TGGG
TS
TTS
T

 .........430.........440.........450.........460.........470.........480.........490
Sequence AEHKFKDCSAIECYMEEYGVTAQEAYDVFNKHVESAWKDLNQEFLKPTEMPTEVLNRSLNLARVMDVLYR
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Known secondary structure (DSSP) T




T

TSSS
SS
SS
 .........500.........510..
Sequence EGDGGKAAKGGITSLLIEPIAL
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Known secondary structure (DSSP) SS


T





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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