Email l.a.kelley@imperial.ac.uk Description P40120 Date Thu Jan 5 12:01:11 GMT 2012 Unique Job ID 6ccdd1af2a472a65

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1txkA_ 100.0 36 PDB header:biosynthetic protein Chain: A: PDB Molecule:glucans biosynthesis protein g; PDBTitle: crystal structure of escherichia coli opgg 2 d1txka2 100.0 41 Fold:Supersandwich Superfamily:Galactose mutarotase-like Family:MdoG-like 3 d1txka1 100.0 24 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:E-set domains of sugar-utilizing enzymes 4 c2e76D_ 53.0 11 PDB header:photosynthesis Chain: D: PDB Molecule:cytochrome b6-f complex iron-sulfur subunit; PDBTitle: crystal structure of the cytochrome b6f complex with tridecyl-2 stigmatellin (tds) from m.laminosus 5 c2r5oA_ 44.6 14 PDB header:transport protein Chain: A: PDB Molecule:putative atp binding component of abc- PDBTitle: crystal structure of the c-terminal domain of wzt 6 d1nkra1 21.4 44 Fold:Immunoglobulin-like beta-sandwich Superfamily:Immunoglobulin Family:I set domains 7 d2d7na1 20.6 15 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Filamin repeat (rod domain) 8 d2jnaa1 20.4 17 Fold:Dodecin subunit-like Superfamily:YdgH-like Family:YdgH-like 9 d2noca1 19.6 14 Fold:Dodecin subunit-like Superfamily:YdgH-like Family:YdgH-like 10 c1p84E_ 18.5 9 PDB header:oxidoreductase Chain: E: PDB Molecule:ubiquinol-cytochrome c reductase iron-sulfur PDBTitle: hdbt inhibited yeast cytochrome bc1 complex 11 c1se9A_ 17.8 14 PDB header:plant protein Chain: A: PDB Molecule:ubiquitin family; PDBTitle: structure of at3g01050, a ubiquitin-fold protein from2 arabidopsis thaliana 12 d1se9a_ 17.8 14 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 13 c3on7C_ 17.4 17 PDB header:oxidoreductase Chain: C: PDB Molecule:oxidoreductase, iron/ascorbate family; PDBTitle: crystal structure of a putative oxygenase (so_2589) from shewanella2 oneidensis at 2.20 a resolution 14 c3rhfB_ 17.2 13 PDB header:transferase Chain: B: PDB Molecule:putative polyphosphate kinase 2 family protein; PDBTitle: crystal structure of polyphosphate kinase 2 from arthrobacter2 aurescens tc1 15 c2l6mA_ 16.5 38 PDB header:hydrolase Chain: A: PDB Molecule:protein dicer; PDBTitle: structure of c-terminal dsrbd of the fission yeast dicer (dcr1) 16 d1oisa_ 15.6 24 Fold:Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment Superfamily:Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment Family:Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment 17 d1jmxa5 15.3 13 Fold:Streptavidin-like Superfamily:Quinohemoprotein amine dehydrogenase A chain, domain 3 Family:Quinohemoprotein amine dehydrogenase A chain, domain 3 18 c2r3aA_ 15.0 17 PDB header:transferase Chain: A: PDB Molecule:histone-lysine n-methyltransferase suv39h2; PDBTitle: methyltransferase domain of human suppressor of variegation2 3-9 homolog 2 19 d2dl2a1 15.0 40 Fold:Immunoglobulin-like beta-sandwich Superfamily:Immunoglobulin Family:I set domains 20 d1xbwa_ 13.7 32 Fold:Ferredoxin-like Superfamily:Dimeric alpha+beta barrel Family:PG130-like 21 c3r0eC_ not modelled 12.8 16 PDB header:sugar binding protein Chain: C: PDB Molecule:lectin; PDBTitle: structure of remusatia vivipara lectin 22 c3ooxA_ not modelled 12.1 21 PDB header:oxidoreductase Chain: A: PDB Molecule:putative 2og-fe(ii) oxygenase family protein; PDBTitle: crystal structure of a putative 2og-fe(ii) oxygenase family protein2 (cc_0200) from caulobacter crescentus at 1.44 a resolution 23 d1dmla1 not modelled 11.9 26 Fold:DNA clamp Superfamily:DNA clamp Family:DNA polymerase processivity factor 24 c3exmA_ not modelled 11.7 24 PDB header:hydrolase Chain: A: PDB Molecule:phosphatase sc4828; PDBTitle: crystal structure of the phosphatase sc4828 with the non-hydrolyzable2 nucleotide gpcp 25 c2l3bA_ not modelled 11.6 18 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved protein found in conjugate transposon; PDBTitle: solution nmr structure of the bt_0084 lipoprotein from bacteroides2 thetaiotaomicron, northeast structural genomics consortium target3 btr376 26 d1k4ta3 not modelled 11.4 24 Fold:Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment Superfamily:Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment Family:Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment 27 c2i1jA_ not modelled 11.4 35 PDB header:cell adhesion, membrane protein Chain: A: PDB Molecule:moesin; PDBTitle: moesin from spodoptera frugiperda at 2.1 angstroms resolution 28 c2fynO_ not modelled 11.3 17 PDB header:oxidoreductase Chain: O: PDB Molecule:ubiquinol-cytochrome c reductase iron-sulfur PDBTitle: crystal structure analysis of the double mutant rhodobacter2 sphaeroides bc1 complex 29 c2l7qA_ not modelled 11.3 20 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved protein found in conjugate transposon; PDBTitle: solution nmr structure of conjugate transposon protein bvu_1572(27-2 141) from bacteroides vulgatus, northeast structural genomics3 consortium target bvr155 30 d1ee8a2 not modelled 11.3 22 Fold:N-terminal domain of MutM-like DNA repair proteins Superfamily:N-terminal domain of MutM-like DNA repair proteins Family:N-terminal domain of MutM-like DNA repair proteins 31 d1csya_ not modelled 11.0 18 Fold:SH2-like Superfamily:SH2 domain Family:SH2 domain 32 c2fyuE_ not modelled 10.8 22 PDB header:oxidoreductase Chain: E: PDB Molecule:ubiquinol-cytochrome c reductase iron-sulfur subunit, PDBTitle: crystal structure of bovine heart mitochondrial bc1 with jg1442 inhibitor 33 d1qcsa1 not modelled 10.2 43 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Cdc48 N-terminal domain-like 34 c3phuA_ not modelled 10.2 9 PDB header:hydrolase Chain: A: PDB Molecule:rna-directed rna polymerase l; PDBTitle: otu domain of crimean congo hemorrhagic fever virus 35 d1ix2a_ not modelled 9.8 50 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Copper resistance protein C (CopC, PcoC) 36 d1ml9a_ not modelled 9.4 13 Fold:beta-clip Superfamily:SET domain Family:Histone lysine methyltransferases 37 c2p8zS_ not modelled 9.3 56 PDB header:translation Chain: S: PDB Molecule:elongation factor tu-b; PDBTitle: fitted structure of adpr-eef2 in the 80s:adpr-2 eef2:gdpnp:sordarin cryo-em reconstruction 38 d1erna1 not modelled 9.2 34 Fold:Immunoglobulin-like beta-sandwich Superfamily:Fibronectin type III Family:Fibronectin type III 39 d1h95a_ not modelled 9.2 22 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 40 d1e09a_ not modelled 9.1 23 Fold:TBP-like Superfamily:Bet v1-like Family:Pathogenesis-related protein 10 (PR10)-like 41 d1p1la_ not modelled 9.0 40 Fold:Ferredoxin-like Superfamily:GlnB-like Family:Divalent ion tolerance proteins CutA (CutA1) 42 d1ja1a3 not modelled 9.0 44 Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain Family:NADPH-cytochrome p450 reductase-like 43 c3d3zA_ not modelled 8.9 27 PDB header:hydrolase Chain: A: PDB Molecule:actibind; PDBTitle: crystal structure of actibind a t2 rnase 44 c3o0lB_ not modelled 8.7 22 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a pfam duf1425 family member (shew_1734) from2 shewanella sp. pv-4 at 1.81 a resolution 45 c3camB_ not modelled 8.7 56 PDB header:gene regulation Chain: B: PDB Molecule:cold-shock domain family protein; PDBTitle: crystal structure of the cold shock domain protein from neisseria2 meningitidis 46 d1a8pa2 not modelled 8.6 44 Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain Family:Reductases 47 d1fdra2 not modelled 8.5 33 Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain Family:Reductases 48 c1a31A_ not modelled 8.4 24 PDB header:isomerase/dna Chain: A: PDB Molecule:protein (topoisomerase i); PDBTitle: human reconstituted dna topoisomerase i in covalent complex2 with a 22 base pair dna duplex 49 c1dmlG_ not modelled 8.4 26 PDB header:dna binding protein/transferase Chain: G: PDB Molecule:dna polymerase processivity factor; PDBTitle: crystal structure of herpes simplex ul42 bound to the c-2 terminus of hsv pol 50 d1dq3a3 not modelled 8.2 40 Fold:Homing endonuclease-like Superfamily:Homing endonucleases Family:Intein endonuclease 51 c3adyA_ not modelled 8.2 29 PDB header:proton transport Chain: A: PDB Molecule:dotd; PDBTitle: crystal structure of dotd from legionella 52 d1ef1a2 not modelled 8.2 35 Fold:PH domain-like barrel Superfamily:PH domain-like Family:Third domain of FERM 53 c3nezA_ not modelled 8.1 22 PDB header:fluorescent protein Chain: A: PDB Molecule:mrojoa; PDBTitle: mrojoa 54 d1kr4a_ not modelled 7.9 10 Fold:Ferredoxin-like Superfamily:GlnB-like Family:Divalent ion tolerance proteins CutA (CutA1) 55 d1b2pa_ not modelled 7.9 19 Fold:beta-Prism II Superfamily:alpha-D-mannose-specific plant lectins Family:alpha-D-mannose-specific plant lectins 56 c1ckwA_ not modelled 7.8 12 PDB header:metal transport Chain: A: PDB Molecule:protein (cystic fibrosis transmembrane PDBTitle: cystic fibrosis transmembrane conductance regulator:2 solution structures of peptides based on the phe508 region,3 the most common site of disease-causing delta-f508 mutation 57 c1nh3A_ not modelled 7.8 24 PDB header:isomerase/dna Chain: A: PDB Molecule:dna topoisomerase i; PDBTitle: human topoisomerase i ara-c complex 58 c2rocB_ not modelled 7.8 33 PDB header:apoptosis Chain: B: PDB Molecule:bcl-2-binding component 3; PDBTitle: solution structure of mcl-1 complexed with puma 59 d1f20a2 not modelled 7.8 56 Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain Family:NADPH-cytochrome p450 reductase-like 60 d2ozga1 not modelled 7.7 26 Fold:SCP-like Superfamily:SCP-like Family:EF1021 C-terminal domain-like 61 d1oq1a_ not modelled 7.7 16 Fold:Concanavalin A-like lectins/glucanases Superfamily:Concanavalin A-like lectins/glucanases Family:Hypothetical protein YesU 62 d1ukua_ not modelled 7.6 0 Fold:Ferredoxin-like Superfamily:GlnB-like Family:Divalent ion tolerance proteins CutA (CutA1) 63 d1pjca1 not modelled 7.6 11 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Formate/glycerate dehydrogenases, NAD-domain 64 d2oq1a2 not modelled 7.5 9 Fold:SH2-like Superfamily:SH2 domain Family:SH2 domain 65 c2k7pA_ not modelled 7.5 18 PDB header:structural protein Chain: A: PDB Molecule:filamin-a; PDBTitle: filamin a ig-like domains 16-17 66 d2a5yb1 not modelled 7.5 47 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:CED-4 C-terminal domain-like 67 c2qsdB_ not modelled 7.5 19 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized conserved protein; PDBTitle: crystal structure of a protein il1583 from idiomarina loihiensis 68 d1kbia1 not modelled 7.4 16 Fold:TIM beta/alpha-barrel Superfamily:FMN-linked oxidoreductases Family:FMN-linked oxidoreductases 69 c3czpA_ not modelled 7.4 21 PDB header:transferase Chain: A: PDB Molecule:putative polyphosphate kinase 2; PDBTitle: crystal structure of putative polyphosphate kinase 2 from pseudomonas2 aeruginosa pa01 70 c2ns2A_ not modelled 7.3 29 PDB header:cell cycle Chain: A: PDB Molecule:spindlin-1; PDBTitle: crystal structure of spindlin1 71 d1ddga2 not modelled 7.3 44 Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain Family:NADPH-cytochrome p450 reductase-like 72 c2wclA_ not modelled 7.3 36 PDB header:transport protein Chain: A: PDB Molecule:general odorant-binding protein 1; PDBTitle: structure of bmori gobp2 (general odorant binding protein 2)2 with (8e,10z)-hexadecadien-1-ol 73 d1p7hl1 not modelled 7.3 22 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain 74 c2kl5A_ not modelled 7.3 36 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein yutd; PDBTitle: solution nmr structure of protein yutd from b.subtilis, northeast2 structural genomics consortium target sr232 75 c3a0jB_ not modelled 7.2 33 PDB header:transcription Chain: B: PDB Molecule:cold shock protein; PDBTitle: crystal structure of cold shock protein 1 from thermus2 thermophilus hb8 76 c2b9sA_ not modelled 7.2 29 PDB header:isomerase/dna Chain: A: PDB Molecule:topoisomerase i-like protein; PDBTitle: crystal structure of heterodimeric l. donovani2 topoisomerase i-vanadate-dna complex 77 d1d6za3 not modelled 7.2 17 Fold:Cystatin-like Superfamily:Amine oxidase N-terminal region Family:Amine oxidase N-terminal region 78 d1imhc1 not modelled 7.1 21 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain 79 d1dlpa2 not modelled 7.1 24 Fold:beta-Prism II Superfamily:alpha-D-mannose-specific plant lectins Family:alpha-D-mannose-specific plant lectins 80 d1nkra2 not modelled 7.0 50 Fold:Immunoglobulin-like beta-sandwich Superfamily:Immunoglobulin Family:I set domains 81 c1wrgA_ not modelled 6.8 80 PDB header:membrane protein Chain: A: PDB Molecule:light-harvesting protein b-880, beta chain; PDBTitle: light-harvesting complex 1 beta subunit from wild-type2 rhodospirillum rubrum 82 c1ibtC_ not modelled 6.8 23 PDB header:lyase Chain: C: PDB Molecule:histidine decarboxylase beta chain; PDBTitle: structure of the d53,54n mutant of histidine decarboxylase at-170 c 83 c3r2nC_ not modelled 6.7 16 PDB header:hydrolase Chain: C: PDB Molecule:cytidine deaminase; PDBTitle: crystal structure of cytidine deaminase from mycobacterium leprae 84 c2jp2A_ not modelled 6.7 13 PDB header:signaling protein Chain: A: PDB Molecule:sprouty-related, evh1 domain-containing protein PDBTitle: solution structure and resonance assignment of the n-2 terminal evh1 domain from the human spred2 protein3 (sprouty-related protein with evh1 domain isoform 2) 85 d2bk0a1 not modelled 6.7 27 Fold:TBP-like Superfamily:Bet v1-like Family:Pathogenesis-related protein 10 (PR10)-like 86 d1kfia4 not modelled 6.6 21 Fold:TBP-like Superfamily:Phosphoglucomutase, C-terminal domain Family:Phosphoglucomutase, C-terminal domain 87 d1my7a_ not modelled 6.6 32 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain 88 c1meqA_ not modelled 6.6 56 PDB header:viral protein Chain: A: PDB Molecule:exterior membrane glycoprotein (gp120); PDBTitle: hiv gp120 c5 89 d2k54a1 not modelled 6.6 14 Fold:Cystatin-like Superfamily:NTF2-like Family:Atu0742-like 90 c2eiuE_ not modelled 6.6 31 PDB header:structural genomics, unknown function Chain: E: PDB Molecule:hypothetical protein aq_1627; PDBTitle: crystal structure of a putative protein (aq1627) from aquifex aeolicus 91 c1ckxA_ not modelled 6.6 10 PDB header:metal transport Chain: A: PDB Molecule:cystic fibrosis transmembrane conductance PDBTitle: cystic fibrosis transmembrane conductance regulator:2 solution structures of peptides based on the phe508 region,3 the most common site of disease-causing delta-f508 mutation 92 d1h4ra2 not modelled 6.6 35 Fold:PH domain-like barrel Superfamily:PH domain-like Family:Third domain of FERM 93 c2kvhA_ not modelled 6.5 63 PDB header:transcription Chain: A: PDB Molecule:zinc finger and btb domain-containing protein 32; PDBTitle: structure of the three-cys2his2 domain of mouse testis zinc2 finger protein 94 c2a48A_ not modelled 6.5 20 PDB header:luminescent protein Chain: A: PDB Molecule:gfp-like fluorescent chromoprotein amfp486; PDBTitle: crystal structure of amfp486 e150q 95 d1m4ka2 not modelled 6.5 50 Fold:Immunoglobulin-like beta-sandwich Superfamily:Immunoglobulin Family:I set domains 96 c3pt2A_ not modelled 6.5 11 PDB header:hydrolase/protein binding Chain: A: PDB Molecule:rna polymerase; PDBTitle: structure of a viral otu domain protease bound to ubiquitin 97 d1x9na2 not modelled 6.4 33 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:DNA ligase/mRNA capping enzyme postcatalytic domain 98 d1gawa2 not modelled 6.4 56 Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain Family:Reductases 99 d1jb9a2 not modelled 6.4 33 Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain Family:Reductases